Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_B09
         (651 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC026024-1|AAH26024.1|  312|Homo sapiens DHRS12 protein protein.       31   3.6  
BC009825-1|AAH09825.1|  271|Homo sapiens dehydrogenase/reductase...    31   3.6  
AL162377-1|CAI13427.1|  242|Homo sapiens dehydrogenase/reductase...    31   3.6  
AL136525-2|CAH70586.1|  242|Homo sapiens dehydrogenase/reductase...    31   3.6  
AK023701-1|BAB14646.1|  242|Homo sapiens protein ( Homo sapiens ...    31   3.6  
AL590005-2|CAI14989.1| 7543|Homo sapiens dystonin protein.             30   6.2  
AL512448-1|CAI16609.1| 7543|Homo sapiens dystonin protein.             30   6.2  
AL512422-2|CAI14341.1| 7543|Homo sapiens dystonin protein.             30   6.2  
AL137008-2|CAI20330.1| 7543|Homo sapiens dystonin protein.             30   6.2  
AL096710-5|CAI22046.1| 3060|Homo sapiens dystonin protein.             30   6.2  
AL096710-2|CAI22044.1| 7543|Homo sapiens dystonin protein.             30   6.2  
AF400227-1|AAL62062.1| 3060|Homo sapiens bullous pemphigoid anti...    30   6.2  

>BC026024-1|AAH26024.1|  312|Homo sapiens DHRS12 protein protein.
          Length = 312

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
 Frame = -3

Query: 580 VGISNCKQMWNGNSDAKHQFELPSWYSSANCMSN--ESTVHTVSA-MSDSTFGIYVLSTS 410
           V +S+ KQ+W    + K + +L    ++A CM N  E T   +    + +T G+Y+L+T 
Sbjct: 93  VDLSDPKQIWKFVENFKQEHKLHVLINNAGCMVNKRELTEDGLEKNFAANTLGVYILTTG 152

Query: 409 STP 401
             P
Sbjct: 153 LIP 155


>BC009825-1|AAH09825.1|  271|Homo sapiens dehydrogenase/reductase
           (SDR family) member 12 protein.
          Length = 271

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
 Frame = -3

Query: 580 VGISNCKQMWNGNSDAKHQFELPSWYSSANCMSN--ESTVHTVSA-MSDSTFGIYVLSTS 410
           V +S+ KQ+W    + K + +L    ++A CM N  E T   +    + +T G+Y+L+T 
Sbjct: 49  VDLSDPKQIWKFVENFKQEHKLHVLINNAGCMVNKRELTEDGLEKNFAANTLGVYILTTG 108

Query: 409 STP 401
             P
Sbjct: 109 LIP 111


>AL162377-1|CAI13427.1|  242|Homo sapiens dehydrogenase/reductase
           (SDR family) member 12 protein.
          Length = 242

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
 Frame = -3

Query: 580 VGISNCKQMWNGNSDAKHQFELPSWYSSANCMSN--ESTVHTVSA-MSDSTFGIYVLSTS 410
           V +S+ KQ+W    + K + +L    ++A CM N  E T   +    + +T G+Y+L+T 
Sbjct: 49  VDLSDPKQIWKFVENFKQEHKLHVLINNAGCMVNKRELTEDGLEKNFAANTLGVYILTTG 108

Query: 409 STP 401
             P
Sbjct: 109 LIP 111


>AL136525-2|CAH70586.1|  242|Homo sapiens dehydrogenase/reductase
           (SDR family) member 12 protein.
          Length = 242

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
 Frame = -3

Query: 580 VGISNCKQMWNGNSDAKHQFELPSWYSSANCMSN--ESTVHTVSA-MSDSTFGIYVLSTS 410
           V +S+ KQ+W    + K + +L    ++A CM N  E T   +    + +T G+Y+L+T 
Sbjct: 49  VDLSDPKQIWKFVENFKQEHKLHVLINNAGCMVNKRELTEDGLEKNFAANTLGVYILTTG 108

Query: 409 STP 401
             P
Sbjct: 109 LIP 111


>AK023701-1|BAB14646.1|  242|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13639 fis, clone PLACE1011219, weakly similar to
           PROBABLE OXIDOREDUCTASE (EC 1.-.-.-). ).
          Length = 242

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
 Frame = -3

Query: 580 VGISNCKQMWNGNSDAKHQFELPSWYSSANCMSN--ESTVHTVSA-MSDSTFGIYVLSTS 410
           V +S+ KQ+W    + K + +L    ++A CM N  E T   +    + +T G+Y+L+T 
Sbjct: 49  VDLSDPKQIWKFVENFKQEHKLHVLINNAGCMVNKRELTEDGLEKNFAANTLGVYILTTG 108

Query: 409 STP 401
             P
Sbjct: 109 LIP 111


>AL590005-2|CAI14989.1| 7543|Homo sapiens dystonin protein.
          Length = 7543

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +3

Query: 324  TQKNTETVNTLTEV--GGGISGSADSIEGVLEVLKTYIPKVESDIADTVWTVDSLLMQLA 497
            ++  T+  NT  ++  G  +    DS++G  E  K   PKV+S +   + T   L+ + A
Sbjct: 2739 SELGTDLANTKVKLIQGSELPELTDSVKGKDEYFKNMTPKVDSSLDHIICTEPDLIGKPA 2798

Query: 498  EE 503
            EE
Sbjct: 2799 EE 2800


>AL512448-1|CAI16609.1| 7543|Homo sapiens dystonin protein.
          Length = 7543

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +3

Query: 324  TQKNTETVNTLTEV--GGGISGSADSIEGVLEVLKTYIPKVESDIADTVWTVDSLLMQLA 497
            ++  T+  NT  ++  G  +    DS++G  E  K   PKV+S +   + T   L+ + A
Sbjct: 2739 SELGTDLANTKVKLIQGSELPELTDSVKGKDEYFKNMTPKVDSSLDHIICTEPDLIGKPA 2798

Query: 498  EE 503
            EE
Sbjct: 2799 EE 2800


>AL512422-2|CAI14341.1| 7543|Homo sapiens dystonin protein.
          Length = 7543

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +3

Query: 324  TQKNTETVNTLTEV--GGGISGSADSIEGVLEVLKTYIPKVESDIADTVWTVDSLLMQLA 497
            ++  T+  NT  ++  G  +    DS++G  E  K   PKV+S +   + T   L+ + A
Sbjct: 2739 SELGTDLANTKVKLIQGSELPELTDSVKGKDEYFKNMTPKVDSSLDHIICTEPDLIGKPA 2798

Query: 498  EE 503
            EE
Sbjct: 2799 EE 2800


>AL137008-2|CAI20330.1| 7543|Homo sapiens dystonin protein.
          Length = 7543

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +3

Query: 324  TQKNTETVNTLTEV--GGGISGSADSIEGVLEVLKTYIPKVESDIADTVWTVDSLLMQLA 497
            ++  T+  NT  ++  G  +    DS++G  E  K   PKV+S +   + T   L+ + A
Sbjct: 2739 SELGTDLANTKVKLIQGSELPELTDSVKGKDEYFKNMTPKVDSSLDHIICTEPDLIGKPA 2798

Query: 498  EE 503
            EE
Sbjct: 2799 EE 2800


>AL096710-5|CAI22046.1| 3060|Homo sapiens dystonin protein.
          Length = 3060

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +3

Query: 324  TQKNTETVNTLTEV--GGGISGSADSIEGVLEVLKTYIPKVESDIADTVWTVDSLLMQLA 497
            ++  T+  NT  ++  G  +    DS++G  E  K   PKV+S +   + T   L+ + A
Sbjct: 2413 SELGTDLANTKVKLIQGSELPELTDSVKGKDEYFKNMTPKVDSSLDHIICTEPDLIGKPA 2472

Query: 498  EE 503
            EE
Sbjct: 2473 EE 2474


>AL096710-2|CAI22044.1| 7543|Homo sapiens dystonin protein.
          Length = 7543

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +3

Query: 324  TQKNTETVNTLTEV--GGGISGSADSIEGVLEVLKTYIPKVESDIADTVWTVDSLLMQLA 497
            ++  T+  NT  ++  G  +    DS++G  E  K   PKV+S +   + T   L+ + A
Sbjct: 2739 SELGTDLANTKVKLIQGSELPELTDSVKGKDEYFKNMTPKVDSSLDHIICTEPDLIGKPA 2798

Query: 498  EE 503
            EE
Sbjct: 2799 EE 2800


>AF400227-1|AAL62062.1| 3060|Homo sapiens bullous pemphigoid antigen 1
            eB protein.
          Length = 3060

 Score = 30.3 bits (65), Expect = 6.2
 Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = +3

Query: 324  TQKNTETVNTLTEV--GGGISGSADSIEGVLEVLKTYIPKVESDIADTVWTVDSLLMQLA 497
            ++  T+  NT  ++  G  +    DS++G  E  K   PKV+S +   + T   L+ + A
Sbjct: 2413 SELGTDLANTKVKLIQGSELPELTDSVKGKDEYFKNMTPKVDSSLDHIICTEPDLIGKPA 2472

Query: 498  EE 503
            EE
Sbjct: 2473 EE 2474


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,006,596
Number of Sequences: 237096
Number of extensions: 1800842
Number of successful extensions: 3107
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3107
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)