BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P05_F_B09 (651 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z81523-2|CAB04248.1| 928|Caenorhabditis elegans Hypothetical pr... 30 1.2 Z81523-1|CAB04241.1| 944|Caenorhabditis elegans Hypothetical pr... 30 1.2 U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical pr... 30 1.2 AC024775-3|AAK68454.1| 580|Caenorhabditis elegans Hypothetical ... 30 1.2 AC006673-5|AAF39919.2| 335|Caenorhabditis elegans Serpentine re... 29 2.9 U61952-7|AAB03164.1| 1042|Caenorhabditis elegans Abnormal cell l... 29 3.8 AF163018-1|AAD49323.1| 1042|Caenorhabditis elegans bromodomain p... 29 3.8 Z92826-9|CAD90172.1| 701|Caenorhabditis elegans Hypothetical pr... 28 6.6 Z92826-5|CAB07318.1| 198|Caenorhabditis elegans Hypothetical pr... 28 6.6 U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis ... 28 6.6 AL132860-33|CAB60507.2| 701|Caenorhabditis elegans Hypothetical... 28 6.6 AL023847-8|CAI46616.1| 262|Caenorhabditis elegans Hypothetical ... 28 6.6 >Z81523-2|CAB04248.1| 928|Caenorhabditis elegans Hypothetical protein F32H2.1b protein. Length = 928 Score = 30.3 bits (65), Expect = 1.2 Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 3/87 (3%) Frame = +3 Query: 306 SSLPVPTQKNTETVNTLTEVGGGISGSADSIEGVLEVLKTYIPKVESDIADTVWTVDSLL 485 +S VPT + ++T T+V + D+ EG++ V +TY+ ++S + +D L Sbjct: 13 TSTDVPTNTDQTAMST-TQVVDALE--CDTFEGLMNVNETYVEILDSALLSVQQHLDDNL 69 Query: 486 ---MQLAEEYQEGNSN*CFASLLPFHI 557 QL EEY+ N +P H+ Sbjct: 70 KRQQQLKEEYRLYNRADITKRKVPVHL 96 >Z81523-1|CAB04241.1| 944|Caenorhabditis elegans Hypothetical protein F32H2.1a protein. Length = 944 Score = 30.3 bits (65), Expect = 1.2 Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 3/87 (3%) Frame = +3 Query: 306 SSLPVPTQKNTETVNTLTEVGGGISGSADSIEGVLEVLKTYIPKVESDIADTVWTVDSLL 485 +S VPT + ++T T+V + D+ EG++ V +TY+ ++S + +D L Sbjct: 13 TSTDVPTNTDQTAMST-TQVVDALE--CDTFEGLMNVNETYVEILDSALLSVQQHLDDNL 69 Query: 486 ---MQLAEEYQEGNSN*CFASLLPFHI 557 QL EEY+ N +P H+ Sbjct: 70 KRQQQLKEEYRLYNRADITKRKVPVHL 96 >U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical protein F57C12.2 protein. Length = 556 Score = 30.3 bits (65), Expect = 1.2 Identities = 17/55 (30%), Positives = 31/55 (56%) Frame = +3 Query: 297 KEISSLPVPTQKNTETVNTLTEVGGGISGSADSIEGVLEVLKTYIPKVESDIADT 461 +E S+L + +NT VNTL + +S + +S+ L+ T+ VE+++ DT Sbjct: 182 EENSTLKLLYNENTAQVNTLAMISAALSSNEESVNRNLQPTPTH---VENELQDT 233 >AC024775-3|AAK68454.1| 580|Caenorhabditis elegans Hypothetical protein Y41D4A.4 protein. Length = 580 Score = 30.3 bits (65), Expect = 1.2 Identities = 9/31 (29%), Positives = 20/31 (64%) Frame = +3 Query: 42 YYIYTFYIKPKLNSSVIYIYIKVNCTYFIMN 134 YY+Y F + + S++ + + + C+YF++N Sbjct: 469 YYVYGFMLLVTIILSIVTVCVTIVCSYFLLN 499 >AC006673-5|AAF39919.2| 335|Caenorhabditis elegans Serpentine receptor, class h protein8 protein. Length = 335 Score = 29.1 bits (62), Expect = 2.9 Identities = 15/46 (32%), Positives = 21/46 (45%) Frame = -2 Query: 188 FCPNTNLLRFRNRI*KRFVHYEICTIHLDVDVDDATVKLGFYVKCI 51 +C N F + I K F Y IC + + AT+ G +KCI Sbjct: 180 WCDNCFFFNFDSTIFKLF--YVICAVTVVTGTTSATIAFGITIKCI 223 >U61952-7|AAB03164.1| 1042|Caenorhabditis elegans Abnormal cell lineage protein 49 protein. Length = 1042 Score = 28.7 bits (61), Expect = 3.8 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = +3 Query: 66 KPKLNSSVIYIYIKVNCTYFIMNESFLNPIPEPKKIGVWAEGTHIEAKEFMI 221 +P S+ I I + + + S +P+P KKIGV A T E ++ +I Sbjct: 855 RPSTRSTSIIPTINKKNAFRMSSASIQSPLPTTKKIGVRAMATDDEEEDIVI 906 >AF163018-1|AAD49323.1| 1042|Caenorhabditis elegans bromodomain protein LIN-49 protein. Length = 1042 Score = 28.7 bits (61), Expect = 3.8 Identities = 16/52 (30%), Positives = 26/52 (50%) Frame = +3 Query: 66 KPKLNSSVIYIYIKVNCTYFIMNESFLNPIPEPKKIGVWAEGTHIEAKEFMI 221 +P S+ I I + + + S +P+P KKIGV A T E ++ +I Sbjct: 855 RPSTRSTSIIPTINKKNAFRMSSASIQSPLPTTKKIGVRAMATDDEEEDIVI 906 >Z92826-9|CAD90172.1| 701|Caenorhabditis elegans Hypothetical protein Y56A3A.1a protein. Length = 701 Score = 27.9 bits (59), Expect = 6.6 Identities = 13/53 (24%), Positives = 26/53 (49%) Frame = -3 Query: 535 AKHQFELPSWYSSANCMSNESTVHTVSAMSDSTFGIYVLSTSSTPSMLSAEPL 377 +K F +PSWY +++S + + D+ F I+ + +L+A+ L Sbjct: 587 SKVSFPVPSWYGQTAPNTSDSLEYYLRLAPDTLFFIFYYMEGTRAQLLAAKAL 639 >Z92826-5|CAB07318.1| 198|Caenorhabditis elegans Hypothetical protein Y56A3A.1b protein. Length = 198 Score = 27.9 bits (59), Expect = 6.6 Identities = 13/53 (24%), Positives = 26/53 (49%) Frame = -3 Query: 535 AKHQFELPSWYSSANCMSNESTVHTVSAMSDSTFGIYVLSTSSTPSMLSAEPL 377 +K F +PSWY +++S + + D+ F I+ + +L+A+ L Sbjct: 84 SKVSFPVPSWYGQTAPNTSDSLEYYLRLAPDTLFFIFYYMEGTRAQLLAAKAL 136 >U40933-4|AAA81674.1| 778|Caenorhabditis elegans Caenorhabditis zeste white 10 (drosophila) homolog protein 1 protein. Length = 778 Score = 27.9 bits (59), Expect = 6.6 Identities = 11/40 (27%), Positives = 25/40 (62%) Frame = -3 Query: 559 QMWNGNSDAKHQFELPSWYSSANCMSNESTVHTVSAMSDS 440 ++W+ N D+ + PS+++ C +EST++ V+ + D+ Sbjct: 443 RLWSHNEDS----QFPSFFAFQKCTVSESTINFVNLLRDN 478 >AL132860-33|CAB60507.2| 701|Caenorhabditis elegans Hypothetical protein Y56A3A.1a protein. Length = 701 Score = 27.9 bits (59), Expect = 6.6 Identities = 13/53 (24%), Positives = 26/53 (49%) Frame = -3 Query: 535 AKHQFELPSWYSSANCMSNESTVHTVSAMSDSTFGIYVLSTSSTPSMLSAEPL 377 +K F +PSWY +++S + + D+ F I+ + +L+A+ L Sbjct: 587 SKVSFPVPSWYGQTAPNTSDSLEYYLRLAPDTLFFIFYYMEGTRAQLLAAKAL 639 >AL023847-8|CAI46616.1| 262|Caenorhabditis elegans Hypothetical protein Y57A10C.11 protein. Length = 262 Score = 27.9 bits (59), Expect = 6.6 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%) Frame = +3 Query: 33 LLNYYIYTFYIKPKLNSSVIYIYIKVNCT--YFIMNESFLNPIPEPKKI 173 +LN+Y FYI + +Y Y+ V T +F E F IP+ K+ Sbjct: 103 VLNFYGSWFYILITILIYALYAYLAVGTTERFFAYEEEFRYTIPKSVKL 151 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,494,813 Number of Sequences: 27780 Number of extensions: 291765 Number of successful extensions: 830 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 804 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 830 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1444744186 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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