Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_B09
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81523-2|CAB04248.1|  928|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z81523-1|CAB04241.1|  944|Caenorhabditis elegans Hypothetical pr...    30   1.2  
U41554-1|AAA83296.2|  556|Caenorhabditis elegans Hypothetical pr...    30   1.2  
AC024775-3|AAK68454.1|  580|Caenorhabditis elegans Hypothetical ...    30   1.2  
AC006673-5|AAF39919.2|  335|Caenorhabditis elegans Serpentine re...    29   2.9  
U61952-7|AAB03164.1| 1042|Caenorhabditis elegans Abnormal cell l...    29   3.8  
AF163018-1|AAD49323.1| 1042|Caenorhabditis elegans bromodomain p...    29   3.8  
Z92826-9|CAD90172.1|  701|Caenorhabditis elegans Hypothetical pr...    28   6.6  
Z92826-5|CAB07318.1|  198|Caenorhabditis elegans Hypothetical pr...    28   6.6  
U40933-4|AAA81674.1|  778|Caenorhabditis elegans Caenorhabditis ...    28   6.6  
AL132860-33|CAB60507.2|  701|Caenorhabditis elegans Hypothetical...    28   6.6  
AL023847-8|CAI46616.1|  262|Caenorhabditis elegans Hypothetical ...    28   6.6  

>Z81523-2|CAB04248.1|  928|Caenorhabditis elegans Hypothetical
           protein F32H2.1b protein.
          Length = 928

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
 Frame = +3

Query: 306 SSLPVPTQKNTETVNTLTEVGGGISGSADSIEGVLEVLKTYIPKVESDIADTVWTVDSLL 485
           +S  VPT  +   ++T T+V   +    D+ EG++ V +TY+  ++S +      +D  L
Sbjct: 13  TSTDVPTNTDQTAMST-TQVVDALE--CDTFEGLMNVNETYVEILDSALLSVQQHLDDNL 69

Query: 486 ---MQLAEEYQEGNSN*CFASLLPFHI 557
               QL EEY+  N        +P H+
Sbjct: 70  KRQQQLKEEYRLYNRADITKRKVPVHL 96


>Z81523-1|CAB04241.1|  944|Caenorhabditis elegans Hypothetical
           protein F32H2.1a protein.
          Length = 944

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 24/87 (27%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
 Frame = +3

Query: 306 SSLPVPTQKNTETVNTLTEVGGGISGSADSIEGVLEVLKTYIPKVESDIADTVWTVDSLL 485
           +S  VPT  +   ++T T+V   +    D+ EG++ V +TY+  ++S +      +D  L
Sbjct: 13  TSTDVPTNTDQTAMST-TQVVDALE--CDTFEGLMNVNETYVEILDSALLSVQQHLDDNL 69

Query: 486 ---MQLAEEYQEGNSN*CFASLLPFHI 557
               QL EEY+  N        +P H+
Sbjct: 70  KRQQQLKEEYRLYNRADITKRKVPVHL 96


>U41554-1|AAA83296.2|  556|Caenorhabditis elegans Hypothetical
           protein F57C12.2 protein.
          Length = 556

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 17/55 (30%), Positives = 31/55 (56%)
 Frame = +3

Query: 297 KEISSLPVPTQKNTETVNTLTEVGGGISGSADSIEGVLEVLKTYIPKVESDIADT 461
           +E S+L +   +NT  VNTL  +   +S + +S+   L+   T+   VE+++ DT
Sbjct: 182 EENSTLKLLYNENTAQVNTLAMISAALSSNEESVNRNLQPTPTH---VENELQDT 233


>AC024775-3|AAK68454.1|  580|Caenorhabditis elegans Hypothetical
           protein Y41D4A.4 protein.
          Length = 580

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 9/31 (29%), Positives = 20/31 (64%)
 Frame = +3

Query: 42  YYIYTFYIKPKLNSSVIYIYIKVNCTYFIMN 134
           YY+Y F +   +  S++ + + + C+YF++N
Sbjct: 469 YYVYGFMLLVTIILSIVTVCVTIVCSYFLLN 499


>AC006673-5|AAF39919.2|  335|Caenorhabditis elegans Serpentine
           receptor, class h protein8 protein.
          Length = 335

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = -2

Query: 188 FCPNTNLLRFRNRI*KRFVHYEICTIHLDVDVDDATVKLGFYVKCI 51
           +C N     F + I K F  Y IC + +      AT+  G  +KCI
Sbjct: 180 WCDNCFFFNFDSTIFKLF--YVICAVTVVTGTTSATIAFGITIKCI 223


>U61952-7|AAB03164.1| 1042|Caenorhabditis elegans Abnormal cell
            lineage protein 49 protein.
          Length = 1042

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +3

Query: 66   KPKLNSSVIYIYIKVNCTYFIMNESFLNPIPEPKKIGVWAEGTHIEAKEFMI 221
            +P   S+ I   I     + + + S  +P+P  KKIGV A  T  E ++ +I
Sbjct: 855  RPSTRSTSIIPTINKKNAFRMSSASIQSPLPTTKKIGVRAMATDDEEEDIVI 906


>AF163018-1|AAD49323.1| 1042|Caenorhabditis elegans bromodomain
            protein LIN-49 protein.
          Length = 1042

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/52 (30%), Positives = 26/52 (50%)
 Frame = +3

Query: 66   KPKLNSSVIYIYIKVNCTYFIMNESFLNPIPEPKKIGVWAEGTHIEAKEFMI 221
            +P   S+ I   I     + + + S  +P+P  KKIGV A  T  E ++ +I
Sbjct: 855  RPSTRSTSIIPTINKKNAFRMSSASIQSPLPTTKKIGVRAMATDDEEEDIVI 906


>Z92826-9|CAD90172.1|  701|Caenorhabditis elegans Hypothetical
           protein Y56A3A.1a protein.
          Length = 701

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 13/53 (24%), Positives = 26/53 (49%)
 Frame = -3

Query: 535 AKHQFELPSWYSSANCMSNESTVHTVSAMSDSTFGIYVLSTSSTPSMLSAEPL 377
           +K  F +PSWY      +++S  + +    D+ F I+     +   +L+A+ L
Sbjct: 587 SKVSFPVPSWYGQTAPNTSDSLEYYLRLAPDTLFFIFYYMEGTRAQLLAAKAL 639


>Z92826-5|CAB07318.1|  198|Caenorhabditis elegans Hypothetical
           protein Y56A3A.1b protein.
          Length = 198

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 13/53 (24%), Positives = 26/53 (49%)
 Frame = -3

Query: 535 AKHQFELPSWYSSANCMSNESTVHTVSAMSDSTFGIYVLSTSSTPSMLSAEPL 377
           +K  F +PSWY      +++S  + +    D+ F I+     +   +L+A+ L
Sbjct: 84  SKVSFPVPSWYGQTAPNTSDSLEYYLRLAPDTLFFIFYYMEGTRAQLLAAKAL 136


>U40933-4|AAA81674.1|  778|Caenorhabditis elegans Caenorhabditis
           zeste white 10 (drosophila) homolog protein 1 protein.
          Length = 778

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 11/40 (27%), Positives = 25/40 (62%)
 Frame = -3

Query: 559 QMWNGNSDAKHQFELPSWYSSANCMSNESTVHTVSAMSDS 440
           ++W+ N D+    + PS+++   C  +EST++ V+ + D+
Sbjct: 443 RLWSHNEDS----QFPSFFAFQKCTVSESTINFVNLLRDN 478


>AL132860-33|CAB60507.2|  701|Caenorhabditis elegans Hypothetical
           protein Y56A3A.1a protein.
          Length = 701

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 13/53 (24%), Positives = 26/53 (49%)
 Frame = -3

Query: 535 AKHQFELPSWYSSANCMSNESTVHTVSAMSDSTFGIYVLSTSSTPSMLSAEPL 377
           +K  F +PSWY      +++S  + +    D+ F I+     +   +L+A+ L
Sbjct: 587 SKVSFPVPSWYGQTAPNTSDSLEYYLRLAPDTLFFIFYYMEGTRAQLLAAKAL 639


>AL023847-8|CAI46616.1|  262|Caenorhabditis elegans Hypothetical
           protein Y57A10C.11 protein.
          Length = 262

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = +3

Query: 33  LLNYYIYTFYIKPKLNSSVIYIYIKVNCT--YFIMNESFLNPIPEPKKI 173
           +LN+Y   FYI   +    +Y Y+ V  T  +F   E F   IP+  K+
Sbjct: 103 VLNFYGSWFYILITILIYALYAYLAVGTTERFFAYEEEFRYTIPKSVKL 151


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,494,813
Number of Sequences: 27780
Number of extensions: 291765
Number of successful extensions: 830
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 830
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)