Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_B08
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    21   6.7  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    21   6.7  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   6.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   6.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   6.7  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   8.9  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 584 HSDPQYGPFCERF 622
           H DPQY P  E+F
Sbjct: 384 HRDPQYFPDPEKF 396


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 140 RLSQNRHRPLIVKEHCGPYQDN 75
           RL Q++    IV+EH G   DN
Sbjct: 11  RLDQDQCSHRIVREHLGLKHDN 32


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 140 RLSQNRHRPLIVKEHCGPYQDN 75
           RL Q++    IV+EH G   DN
Sbjct: 325 RLDQDQCSHRIVREHLGLKHDN 346


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 140 RLSQNRHRPLIVKEHCGPYQDN 75
           RL Q++    IV+EH G   DN
Sbjct: 558 RLDQDQCSHRIVREHLGLKHDN 579


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 140 RLSQNRHRPLIVKEHCGPYQDN 75
           RL Q++    IV+EH G   DN
Sbjct: 558 RLDQDQCSHRIVREHLGLKHDN 579


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 6/6 (100%), Positives = 6/6 (100%)
 Frame = -1

Query: 303 WCSPYI 286
           WCSPYI
Sbjct: 488 WCSPYI 493


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,107
Number of Sequences: 336
Number of extensions: 3234
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)