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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_B08
         (654 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBPB10D8.02c |||arylsulfatase |Schizosaccharomyces pombe|chr 2|...    63   3e-11
SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces pomb...    27   1.8  
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p...    26   4.1  
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa...    26   4.1  
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc...    26   4.1  
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce...    26   4.1  
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz...    26   4.1  
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy...    26   4.1  
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc...    26   4.1  
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc...    26   4.1  
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo...    26   4.1  
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy...    26   4.1  
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos...    26   4.1  
SPBC17A3.04c |||methionine-tRNA ligase |Schizosaccharomyces pomb...    25   7.2  

>SPBPB10D8.02c |||arylsulfatase |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 554

 Score = 63.3 bits (147), Expect = 3e-11
 Identities = 40/120 (33%), Positives = 68/120 (56%), Gaps = 13/120 (10%)
 Frame = +2

Query: 86  KVRNVLLLLADDGGF-EIGAYRNKICQTPNIDELARNGLLFNNAFTSVSSCSPSRAALLT 262
           K  N L+++ADD G+ ++  + ++I  TPNI+ LA+ G+   N F + S+CSP+R+ LL+
Sbjct: 10  KKPNFLVIVADDLGWSDVSPFGSEI-HTPNIERLAKEGVRLTN-FHTASACSPTRSMLLS 67

Query: 263 GSPSHQNGMYGLHHGVHHFNSF------------DNVTSLPNLLRQNGIMTGIIGKKHVG 406
           G+ +H  G+  +   V  F+              D V +LP +L++ G  T + GK H+G
Sbjct: 68  GTDNHIAGLGQMAETVRRFSKVWGGKPGYEGYLNDRVAALPEILQEAGYYTTMSGKWHLG 127


>SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 420

 Score = 27.5 bits (58), Expect = 1.8
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +2

Query: 275 HQNGMYGLHHGVHHFNSFDNVTSLPNLLRQNGI 373
           H  G +  HH  HH +S D+  S P   +QN +
Sbjct: 295 HHEGHHHHHHHHHHHHSHDDDPSSPAEKKQNHV 327


>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1333

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 4/109 (3%)
 Frame = +2

Query: 137 GAYRNKICQTPNIDELARNGLLFNNAFTSVSSCSPSRAALLTGSPSHQNGMYGLHHGVHH 316
           G Y NKI +      ++ NG+     F  V   S   A   T    +   +    H +  
Sbjct: 302 GVYPNKINRKTIKLNISLNGISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQ 361

Query: 317 FNSFDNVT---SLPNLLRQ-NGIMTGIIGKKHVGPSSVYQFDYEQTEEN 451
            N   N+     LP++ ++   I      +K   P    +F+ E T+EN
Sbjct: 362 MNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQEN 410


>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
           element|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1333

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 4/109 (3%)
 Frame = +2

Query: 137 GAYRNKICQTPNIDELARNGLLFNNAFTSVSSCSPSRAALLTGSPSHQNGMYGLHHGVHH 316
           G Y NKI +      ++ NG+     F  V   S   A   T    +   +    H +  
Sbjct: 302 GVYPNKINRKTIKLNISLNGISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQ 361

Query: 317 FNSFDNVT---SLPNLLRQ-NGIMTGIIGKKHVGPSSVYQFDYEQTEEN 451
            N   N+     LP++ ++   I      +K   P    +F+ E T+EN
Sbjct: 362 MNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQEN 410


>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1333

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 4/109 (3%)
 Frame = +2

Query: 137 GAYRNKICQTPNIDELARNGLLFNNAFTSVSSCSPSRAALLTGSPSHQNGMYGLHHGVHH 316
           G Y NKI +      ++ NG+     F  V   S   A   T    +   +    H +  
Sbjct: 302 GVYPNKINRKTIKLNISLNGISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQ 361

Query: 317 FNSFDNVT---SLPNLLRQ-NGIMTGIIGKKHVGPSSVYQFDYEQTEEN 451
            N   N+     LP++ ++   I      +K   P    +F+ E T+EN
Sbjct: 362 MNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQEN 410


>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1333

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 4/109 (3%)
 Frame = +2

Query: 137 GAYRNKICQTPNIDELARNGLLFNNAFTSVSSCSPSRAALLTGSPSHQNGMYGLHHGVHH 316
           G Y NKI +      ++ NG+     F  V   S   A   T    +   +    H +  
Sbjct: 302 GVYPNKINRKTIKLNISLNGISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQ 361

Query: 317 FNSFDNVT---SLPNLLRQ-NGIMTGIIGKKHVGPSSVYQFDYEQTEEN 451
            N   N+     LP++ ++   I      +K   P    +F+ E T+EN
Sbjct: 362 MNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQEN 410


>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
           element|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1333

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 4/109 (3%)
 Frame = +2

Query: 137 GAYRNKICQTPNIDELARNGLLFNNAFTSVSSCSPSRAALLTGSPSHQNGMYGLHHGVHH 316
           G Y NKI +      ++ NG+     F  V   S   A   T    +   +    H +  
Sbjct: 302 GVYPNKINRKTIKLNISLNGISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQ 361

Query: 317 FNSFDNVT---SLPNLLRQ-NGIMTGIIGKKHVGPSSVYQFDYEQTEEN 451
            N   N+     LP++ ++   I      +K   P    +F+ E T+EN
Sbjct: 362 MNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQEN 410


>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1333

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 4/109 (3%)
 Frame = +2

Query: 137 GAYRNKICQTPNIDELARNGLLFNNAFTSVSSCSPSRAALLTGSPSHQNGMYGLHHGVHH 316
           G Y NKI +      ++ NG+     F  V   S   A   T    +   +    H +  
Sbjct: 302 GVYPNKINRKTIKLNISLNGISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQ 361

Query: 317 FNSFDNVT---SLPNLLRQ-NGIMTGIIGKKHVGPSSVYQFDYEQTEEN 451
            N   N+     LP++ ++   I      +K   P    +F+ E T+EN
Sbjct: 362 MNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQEN 410


>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1333

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 4/109 (3%)
 Frame = +2

Query: 137 GAYRNKICQTPNIDELARNGLLFNNAFTSVSSCSPSRAALLTGSPSHQNGMYGLHHGVHH 316
           G Y NKI +      ++ NG+     F  V   S   A   T    +   +    H +  
Sbjct: 302 GVYPNKINRKTIKLNISLNGISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQ 361

Query: 317 FNSFDNVT---SLPNLLRQ-NGIMTGIIGKKHVGPSSVYQFDYEQTEEN 451
            N   N+     LP++ ++   I      +K   P    +F+ E T+EN
Sbjct: 362 MNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQEN 410


>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 1333

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 4/109 (3%)
 Frame = +2

Query: 137 GAYRNKICQTPNIDELARNGLLFNNAFTSVSSCSPSRAALLTGSPSHQNGMYGLHHGVHH 316
           G Y NKI +      ++ NG+     F  V   S   A   T    +   +    H +  
Sbjct: 302 GVYPNKINRKTIKLNISLNGISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQ 361

Query: 317 FNSFDNVT---SLPNLLRQ-NGIMTGIIGKKHVGPSSVYQFDYEQTEEN 451
            N   N+     LP++ ++   I      +K   P    +F+ E T+EN
Sbjct: 362 MNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQEN 410


>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
           element|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1333

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 4/109 (3%)
 Frame = +2

Query: 137 GAYRNKICQTPNIDELARNGLLFNNAFTSVSSCSPSRAALLTGSPSHQNGMYGLHHGVHH 316
           G Y NKI +      ++ NG+     F  V   S   A   T    +   +    H +  
Sbjct: 302 GVYPNKINRKTIKLNISLNGISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQ 361

Query: 317 FNSFDNVT---SLPNLLRQ-NGIMTGIIGKKHVGPSSVYQFDYEQTEEN 451
            N   N+     LP++ ++   I      +K   P    +F+ E T+EN
Sbjct: 362 MNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQEN 410


>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 1333

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 4/109 (3%)
 Frame = +2

Query: 137 GAYRNKICQTPNIDELARNGLLFNNAFTSVSSCSPSRAALLTGSPSHQNGMYGLHHGVHH 316
           G Y NKI +      ++ NG+     F  V   S   A   T    +   +    H +  
Sbjct: 302 GVYPNKINRKTIKLNISLNGISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQ 361

Query: 317 FNSFDNVT---SLPNLLRQ-NGIMTGIIGKKHVGPSSVYQFDYEQTEEN 451
            N   N+     LP++ ++   I      +K   P    +F+ E T+EN
Sbjct: 362 MNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQEN 410


>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
           element|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1333

 Score = 26.2 bits (55), Expect = 4.1
 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 4/109 (3%)
 Frame = +2

Query: 137 GAYRNKICQTPNIDELARNGLLFNNAFTSVSSCSPSRAALLTGSPSHQNGMYGLHHGVHH 316
           G Y NKI +      ++ NG+     F  V   S   A   T    +   +    H +  
Sbjct: 302 GVYPNKINRKTIKLNISLNGISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQ 361

Query: 317 FNSFDNVT---SLPNLLRQ-NGIMTGIIGKKHVGPSSVYQFDYEQTEEN 451
            N   N+     LP++ ++   I      +K   P    +F+ E T+EN
Sbjct: 362 MNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQEN 410


>SPBC17A3.04c |||methionine-tRNA ligase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 782

 Score = 25.4 bits (53), Expect = 7.2
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -1

Query: 333 LSKELKWWTPWCSPYIPFW*LGDPVRSAARLGEQLLTDVNALL 205
           +++ LK+ T   +  +P + L DP   A +L    + DVNALL
Sbjct: 612 VNRTLKFTTAKYNGLVPHY-LTDPSVGAGKLKADFVKDVNALL 653


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,519,309
Number of Sequences: 5004
Number of extensions: 49883
Number of successful extensions: 153
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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