BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P05_F_B08 (654 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBPB10D8.02c |||arylsulfatase |Schizosaccharomyces pombe|chr 2|... 63 3e-11 SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces pomb... 27 1.8 SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 26 4.1 SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 26 4.1 SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 26 4.1 SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 26 4.1 SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 26 4.1 SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 26 4.1 SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 26 4.1 SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 26 4.1 SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 26 4.1 SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 26 4.1 SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 26 4.1 SPBC17A3.04c |||methionine-tRNA ligase |Schizosaccharomyces pomb... 25 7.2 >SPBPB10D8.02c |||arylsulfatase |Schizosaccharomyces pombe|chr 2|||Manual Length = 554 Score = 63.3 bits (147), Expect = 3e-11 Identities = 40/120 (33%), Positives = 68/120 (56%), Gaps = 13/120 (10%) Frame = +2 Query: 86 KVRNVLLLLADDGGF-EIGAYRNKICQTPNIDELARNGLLFNNAFTSVSSCSPSRAALLT 262 K N L+++ADD G+ ++ + ++I TPNI+ LA+ G+ N F + S+CSP+R+ LL+ Sbjct: 10 KKPNFLVIVADDLGWSDVSPFGSEI-HTPNIERLAKEGVRLTN-FHTASACSPTRSMLLS 67 Query: 263 GSPSHQNGMYGLHHGVHHFNSF------------DNVTSLPNLLRQNGIMTGIIGKKHVG 406 G+ +H G+ + V F+ D V +LP +L++ G T + GK H+G Sbjct: 68 GTDNHIAGLGQMAETVRRFSKVWGGKPGYEGYLNDRVAALPEILQEAGYYTTMSGKWHLG 127 >SPBC17D11.01 |nep1||nedd8 protease Nep1|Schizosaccharomyces pombe|chr 2|||Manual Length = 420 Score = 27.5 bits (58), Expect = 1.8 Identities = 12/33 (36%), Positives = 17/33 (51%) Frame = +2 Query: 275 HQNGMYGLHHGVHHFNSFDNVTSLPNLLRQNGI 373 H G + HH HH +S D+ S P +QN + Sbjct: 295 HHEGHHHHHHHHHHHHSHDDDPSSPAEKKQNHV 327 >SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces pombe|chr 1|||Manual Length = 1333 Score = 26.2 bits (55), Expect = 4.1 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 4/109 (3%) Frame = +2 Query: 137 GAYRNKICQTPNIDELARNGLLFNNAFTSVSSCSPSRAALLTGSPSHQNGMYGLHHGVHH 316 G Y NKI + ++ NG+ F V S A T + + H + Sbjct: 302 GVYPNKINRKTIKLNISLNGISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQ 361 Query: 317 FNSFDNVT---SLPNLLRQ-NGIMTGIIGKKHVGPSSVYQFDYEQTEEN 451 N N+ LP++ ++ I +K P +F+ E T+EN Sbjct: 362 MNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQEN 410 >SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosaccharomyces pombe|chr 2|||Manual Length = 1333 Score = 26.2 bits (55), Expect = 4.1 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 4/109 (3%) Frame = +2 Query: 137 GAYRNKICQTPNIDELARNGLLFNNAFTSVSSCSPSRAALLTGSPSHQNGMYGLHHGVHH 316 G Y NKI + ++ NG+ F V S A T + + H + Sbjct: 302 GVYPNKINRKTIKLNISLNGISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQ 361 Query: 317 FNSFDNVT---SLPNLLRQ-NGIMTGIIGKKHVGPSSVYQFDYEQTEEN 451 N N+ LP++ ++ I +K P +F+ E T+EN Sbjct: 362 MNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQEN 410 >SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces pombe|chr 1|||Manual Length = 1333 Score = 26.2 bits (55), Expect = 4.1 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 4/109 (3%) Frame = +2 Query: 137 GAYRNKICQTPNIDELARNGLLFNNAFTSVSSCSPSRAALLTGSPSHQNGMYGLHHGVHH 316 G Y NKI + ++ NG+ F V S A T + + H + Sbjct: 302 GVYPNKINRKTIKLNISLNGISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQ 361 Query: 317 FNSFDNVT---SLPNLLRQ-NGIMTGIIGKKHVGPSSVYQFDYEQTEEN 451 N N+ LP++ ++ I +K P +F+ E T+EN Sbjct: 362 MNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQEN 410 >SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces pombe|chr 1|||Manual Length = 1333 Score = 26.2 bits (55), Expect = 4.1 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 4/109 (3%) Frame = +2 Query: 137 GAYRNKICQTPNIDELARNGLLFNNAFTSVSSCSPSRAALLTGSPSHQNGMYGLHHGVHH 316 G Y NKI + ++ NG+ F V S A T + + H + Sbjct: 302 GVYPNKINRKTIKLNISLNGISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQ 361 Query: 317 FNSFDNVT---SLPNLLRQ-NGIMTGIIGKKHVGPSSVYQFDYEQTEEN 451 N N+ LP++ ++ I +K P +F+ E T+EN Sbjct: 362 MNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQEN 410 >SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schizosaccharomyces pombe|chr 1|||Manual Length = 1333 Score = 26.2 bits (55), Expect = 4.1 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 4/109 (3%) Frame = +2 Query: 137 GAYRNKICQTPNIDELARNGLLFNNAFTSVSSCSPSRAALLTGSPSHQNGMYGLHHGVHH 316 G Y NKI + ++ NG+ F V S A T + + H + Sbjct: 302 GVYPNKINRKTIKLNISLNGISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQ 361 Query: 317 FNSFDNVT---SLPNLLRQ-NGIMTGIIGKKHVGPSSVYQFDYEQTEEN 451 N N+ LP++ ++ I +K P +F+ E T+EN Sbjct: 362 MNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQEN 410 >SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces pombe|chr 1|||Manual Length = 1333 Score = 26.2 bits (55), Expect = 4.1 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 4/109 (3%) Frame = +2 Query: 137 GAYRNKICQTPNIDELARNGLLFNNAFTSVSSCSPSRAALLTGSPSHQNGMYGLHHGVHH 316 G Y NKI + ++ NG+ F V S A T + + H + Sbjct: 302 GVYPNKINRKTIKLNISLNGISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQ 361 Query: 317 FNSFDNVT---SLPNLLRQ-NGIMTGIIGKKHVGPSSVYQFDYEQTEEN 451 N N+ LP++ ++ I +K P +F+ E T+EN Sbjct: 362 MNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQEN 410 >SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces pombe|chr 1|||Manual Length = 1333 Score = 26.2 bits (55), Expect = 4.1 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 4/109 (3%) Frame = +2 Query: 137 GAYRNKICQTPNIDELARNGLLFNNAFTSVSSCSPSRAALLTGSPSHQNGMYGLHHGVHH 316 G Y NKI + ++ NG+ F V S A T + + H + Sbjct: 302 GVYPNKINRKTIKLNISLNGISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQ 361 Query: 317 FNSFDNVT---SLPNLLRQ-NGIMTGIIGKKHVGPSSVYQFDYEQTEEN 451 N N+ LP++ ++ I +K P +F+ E T+EN Sbjct: 362 MNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQEN 410 >SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces pombe|chr 3|||Manual Length = 1333 Score = 26.2 bits (55), Expect = 4.1 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 4/109 (3%) Frame = +2 Query: 137 GAYRNKICQTPNIDELARNGLLFNNAFTSVSSCSPSRAALLTGSPSHQNGMYGLHHGVHH 316 G Y NKI + ++ NG+ F V S A T + + H + Sbjct: 302 GVYPNKINRKTIKLNISLNGISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQ 361 Query: 317 FNSFDNVT---SLPNLLRQ-NGIMTGIIGKKHVGPSSVYQFDYEQTEEN 451 N N+ LP++ ++ I +K P +F+ E T+EN Sbjct: 362 MNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQEN 410 >SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizosaccharomyces pombe|chr 2|||Manual Length = 1333 Score = 26.2 bits (55), Expect = 4.1 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 4/109 (3%) Frame = +2 Query: 137 GAYRNKICQTPNIDELARNGLLFNNAFTSVSSCSPSRAALLTGSPSHQNGMYGLHHGVHH 316 G Y NKI + ++ NG+ F V S A T + + H + Sbjct: 302 GVYPNKINRKTIKLNISLNGISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQ 361 Query: 317 FNSFDNVT---SLPNLLRQ-NGIMTGIIGKKHVGPSSVYQFDYEQTEEN 451 N N+ LP++ ++ I +K P +F+ E T+EN Sbjct: 362 MNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQEN 410 >SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces pombe|chr 1|||Manual Length = 1333 Score = 26.2 bits (55), Expect = 4.1 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 4/109 (3%) Frame = +2 Query: 137 GAYRNKICQTPNIDELARNGLLFNNAFTSVSSCSPSRAALLTGSPSHQNGMYGLHHGVHH 316 G Y NKI + ++ NG+ F V S A T + + H + Sbjct: 302 GVYPNKINRKTIKLNISLNGISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQ 361 Query: 317 FNSFDNVT---SLPNLLRQ-NGIMTGIIGKKHVGPSSVYQFDYEQTEEN 451 N N+ LP++ ++ I +K P +F+ E T+EN Sbjct: 362 MNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQEN 410 >SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizosaccharomyces pombe|chr 1|||Manual Length = 1333 Score = 26.2 bits (55), Expect = 4.1 Identities = 25/109 (22%), Positives = 41/109 (37%), Gaps = 4/109 (3%) Frame = +2 Query: 137 GAYRNKICQTPNIDELARNGLLFNNAFTSVSSCSPSRAALLTGSPSHQNGMYGLHHGVHH 316 G Y NKI + ++ NG+ F V S A T + + H + Sbjct: 302 GVYPNKINRKTIKLNISLNGISIKTEFLVVKKFSHPAAISFTTLYDNNIEISSSKHTLSQ 361 Query: 317 FNSFDNVT---SLPNLLRQ-NGIMTGIIGKKHVGPSSVYQFDYEQTEEN 451 N N+ LP++ ++ I +K P +F+ E T+EN Sbjct: 362 MNKVSNIVKEPELPDIYKEFKDITAETNTEKLPKPIKGLEFEVELTQEN 410 >SPBC17A3.04c |||methionine-tRNA ligase |Schizosaccharomyces pombe|chr 2|||Manual Length = 782 Score = 25.4 bits (53), Expect = 7.2 Identities = 15/43 (34%), Positives = 24/43 (55%) Frame = -1 Query: 333 LSKELKWWTPWCSPYIPFW*LGDPVRSAARLGEQLLTDVNALL 205 +++ LK+ T + +P + L DP A +L + DVNALL Sbjct: 612 VNRTLKFTTAKYNGLVPHY-LTDPSVGAGKLKADFVKDVNALL 653 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,519,309 Number of Sequences: 5004 Number of extensions: 49883 Number of successful extensions: 153 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 151 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 151 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 295793106 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -