Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_B08
         (654 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0970 - 33179180-33179210,33179297-33179441,33180307-331803...    36   0.028
03_02_0932 + 12495700-12495738,12495859-12496093,12496178-124964...    28   7.5  
01_05_0712 - 24531654-24531874,24532438-24532538,24532621-245327...    28   7.5  
06_03_0867 + 25534760-25539620,25540662-25540857,25540957-255411...    27   9.9  

>02_05_0970 -
           33179180-33179210,33179297-33179441,33180307-33180362,
           33180650-33180691,33180814-33180866,33181059-33181490,
           33181630-33181707,33181785-33181870,33183588-33183689,
           33183754-33183960,33184976-33185336,33185463-33185626,
           33185709-33185817,33186468-33186485
          Length = 627

 Score = 35.9 bits (79), Expect = 0.028
 Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 4/69 (5%)
 Frame = +2

Query: 191 NGLLFNNAFTSVSSCSPSRAALLTGSPSHQNGMY--GLHH-GVHHFNSFDNVTSLPNLLR 361
           +GLL +N   S S+   S     TGS S Q+G    G HH G+H+ +   N+ ++P    
Sbjct: 2   SGLLNSNLNNSASNLQDSTGRPFTGSFSGQSGSVPGGFHHSGLHNMHGSLNMPNMPGSFS 61

Query: 362 Q-NGIMTGI 385
           Q N  M+G+
Sbjct: 62  QRNAAMSGL 70


>03_02_0932 +
           12495700-12495738,12495859-12496093,12496178-12496423,
           12496519-12496572,12497329-12497589,12497750-12497802,
           12497893-12498016,12498147-12498401,12498798-12499888,
           12500001-12500007,12500316-12500445,12500617-12500731,
           12500783-12500853,12501246-12501354,12501550-12501738,
           12502519-12502644,12503048-12503563
          Length = 1206

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 20/68 (29%), Positives = 29/68 (42%)
 Frame = +2

Query: 44  LSFIFSLLKLYYLDKVRNVLLLLADDGGFEIGAYRNKICQTPNIDELARNGLLFNNAFTS 223
           LSF+F  L L  L K  +++L   D+G     A  + IC+  N+  L    +      T 
Sbjct: 64  LSFVFWTLTLIPLIKYVSIVLRADDNGEGGTFALYSLICRHANVSLLPNRQIADEELSTY 123

Query: 224 VSSCSPSR 247
              CS  R
Sbjct: 124 KLECSSER 131


>01_05_0712 -
           24531654-24531874,24532438-24532538,24532621-24532716,
           24532951-24533048,24533827-24533883,24534764-24534895,
           24535042-24535155,24535227-24535359,24535448-24535678,
           24535761-24535843,24536009-24536137,24536504-24536599,
           24536719-24536773,24537316-24537386,24537472-24537525,
           24537691-24537768,24537985-24538117,24539381-24539496,
           24539580-24539651,24540113-24540218,24540657-24540772,
           24541170-24541319,24541410-24541492,24541591-24541669,
           24542645-24542695
          Length = 884

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 19/64 (29%), Positives = 28/64 (43%)
 Frame = +2

Query: 134 IGAYRNKICQTPNIDELARNGLLFNNAFTSVSSCSPSRAALLTGSPSHQNGMYGLHHGVH 313
           I  YRN +   P+  E+ R+  L       +S    +R  LLT  P+H+    G     H
Sbjct: 97  IKCYRNALRIDPDNIEILRDLSLLQAQMRDLSGFVETRQQLLTLKPNHRMNWIGF-AVAH 155

Query: 314 HFNS 325
           H +S
Sbjct: 156 HLSS 159


>06_03_0867 +
           25534760-25539620,25540662-25540857,25540957-25541104,
           25541673-25541751,25542151-25542238,25542330-25542600,
           25542676-25542718,25542801-25542904,25543374-25543790
          Length = 2068

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 15/60 (25%), Positives = 21/60 (35%)
 Frame = +2

Query: 173 IDELARNGLLFNNAFTSVSSCSPSRAALLTGSPSHQNGMYGLHHGVHHFNSFDNVTSLPN 352
           ++  AR+    +   T+V         +LTGS     G  G   G H    F      PN
Sbjct: 683 LNNSARSSSTSDTCMTAVEGAQKKEGIILTGSSEKSIGFLGDSVGTHRTTEFGASKDAPN 742


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,049,100
Number of Sequences: 37544
Number of extensions: 346382
Number of successful extensions: 979
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)