Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_B08
         (654 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    25   0.48 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   2.6  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              22   6.0  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   6.0  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   7.9  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 25.4 bits (53), Expect = 0.48
 Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
 Frame = +2

Query: 119 DGGFEIGAYRNKICQTPNIDELAR---NGLLFNNAFTSVSSCSPSRAALLTGSPSHQNG 286
           D G++ GA    +   P ++  +    N  + +   +S SS  P++ A   G PS +NG
Sbjct: 488 DSGYD-GAASTAVIHEPVVETNSSPSPNPRIASAPSSSTSSSPPAKGAAAAGQPSKRNG 545


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = +1

Query: 454 PH*SGRSQHHPHEAARP 504
           PH    SQ+HPH  + P
Sbjct: 318 PHQHHPSQYHPHRGSSP 334


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +2

Query: 560  FHDPHRCGHSDPQYGPFCERFGSGEEGMGT 649
            + DP  C   + QYG    ++G+  +  G+
Sbjct: 1807 YDDPANCAPEEDQYGSQYGQYGAPYDHYGS 1836


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +2

Query: 5   TLIIASYXASNLPLSFIFSLLKLYYLDKVRNV 100
           TLI+ +     + L  +  +L +Y+  K+RNV
Sbjct: 68  TLIVLAIVNVMVVLGNVLVILAVYHTSKLRNV 99


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +2

Query: 431 YEQTEENNHINQVGRNITHMKLLAREFIASANKE 532
           Y+Q +E   I+QVG  I     +  E + +A ++
Sbjct: 677 YQQLKEQGQISQVGGGIQQNVEVLPENLVNAQQQ 710


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,733
Number of Sequences: 438
Number of extensions: 3746
Number of successful extensions: 54
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)