BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P05_F_B05 (650 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ chann... 27 0.68 AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium ch... 27 0.68 AF515523-1|AAM61890.1| 222|Anopheles gambiae glutathione S-tran... 27 0.68 M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles ... 24 3.6 CR954256-9|CAJ14150.1| 872|Anopheles gambiae putative calcium/c... 24 3.6 AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 23 8.4 >AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ channel protein. Length = 574 Score = 26.6 bits (56), Expect = 0.68 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = -3 Query: 390 CSFNTL*TIGISRPSTLKTTISPTRTGSS 304 C+FNTL T+ + R +T +I PT GSS Sbjct: 211 CTFNTLDTVYMFRNAT-APSIFPTEVGSS 238 >AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium channel protein. Length = 572 Score = 26.6 bits (56), Expect = 0.68 Identities = 14/29 (48%), Positives = 19/29 (65%) Frame = -3 Query: 390 CSFNTL*TIGISRPSTLKTTISPTRTGSS 304 C+FNTL T+ + R +T +I PT GSS Sbjct: 211 CTFNTLDTVYMFRNAT-APSIFPTEVGSS 238 >AF515523-1|AAM61890.1| 222|Anopheles gambiae glutathione S-transferase u2 protein. Length = 222 Score = 26.6 bits (56), Expect = 0.68 Identities = 14/40 (35%), Positives = 20/40 (50%) Frame = -3 Query: 246 DSTTTIGLSLPVTTIKPFHIIKAEDTIIPKLNTWYMNCRL 127 ++ T LSL T H + T P+LN WY +CR+ Sbjct: 154 ENLTIADLSLVPTIASAVHC-GLDLTNYPRLNAWYESCRV 192 >M93689-1|AAA29368.1| 442|Anopheles gambiae protein ( Anopheles gambiae T1 retroposon. ). Length = 442 Score = 24.2 bits (50), Expect = 3.6 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%) Frame = -1 Query: 458 SLCHQRYYCH--LWLRTLLCHCSFHVVSILCEQS 363 SL R +C +WLR+ CH S VS + + S Sbjct: 5 SLLLFRQFCRDIVWLRSCSCHSSVCAVSFVMQCS 38 >CR954256-9|CAJ14150.1| 872|Anopheles gambiae putative calcium/calmodulin-dependentprotein kinase, CAKI protein. Length = 872 Score = 24.2 bits (50), Expect = 3.6 Identities = 7/16 (43%), Positives = 12/16 (75%) Frame = -3 Query: 519 NPLARPTTSFLVSHSW 472 NP++RPT + ++ H W Sbjct: 241 NPISRPTITEVLDHPW 256 >AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. Length = 1376 Score = 23.0 bits (47), Expect = 8.4 Identities = 20/77 (25%), Positives = 39/77 (50%) Frame = +2 Query: 80 KLTMLESLFDDVRRMNKRQFMYQVLSFGMIVSSALMIWKGLMVVTGSESPIVVVLSGSME 259 K + L+DDVR+ +FM F +I +++ M+ G ++ + +V SM+ Sbjct: 1112 KRNEMRQLYDDVRKKRFTEFM---RGFHIITKKLKEMYQ--MITLGGDAELELV--DSMD 1164 Query: 260 PAFHRGDLLFLTNYPEE 310 P F+ G ++F P++ Sbjct: 1165 P-FNEG-IVFSVRPPKK 1179 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 711,973 Number of Sequences: 2352 Number of extensions: 15286 Number of successful extensions: 39 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 39 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 39 length of database: 563,979 effective HSP length: 62 effective length of database: 418,155 effective search space used: 64395870 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -