Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_B05
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    27   0.68 
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    27   0.68 
AF515523-1|AAM61890.1|  222|Anopheles gambiae glutathione S-tran...    27   0.68 
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    24   3.6  
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    24   3.6  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   8.4  

>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 26.6 bits (56), Expect = 0.68
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -3

Query: 390 CSFNTL*TIGISRPSTLKTTISPTRTGSS 304
           C+FNTL T+ + R +T   +I PT  GSS
Sbjct: 211 CTFNTLDTVYMFRNAT-APSIFPTEVGSS 238


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 26.6 bits (56), Expect = 0.68
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = -3

Query: 390 CSFNTL*TIGISRPSTLKTTISPTRTGSS 304
           C+FNTL T+ + R +T   +I PT  GSS
Sbjct: 211 CTFNTLDTVYMFRNAT-APSIFPTEVGSS 238


>AF515523-1|AAM61890.1|  222|Anopheles gambiae glutathione
           S-transferase u2 protein.
          Length = 222

 Score = 26.6 bits (56), Expect = 0.68
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -3

Query: 246 DSTTTIGLSLPVTTIKPFHIIKAEDTIIPKLNTWYMNCRL 127
           ++ T   LSL  T     H    + T  P+LN WY +CR+
Sbjct: 154 ENLTIADLSLVPTIASAVHC-GLDLTNYPRLNAWYESCRV 192


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
 Frame = -1

Query: 458 SLCHQRYYCH--LWLRTLLCHCSFHVVSILCEQS 363
           SL   R +C   +WLR+  CH S   VS + + S
Sbjct: 5   SLLLFRQFCRDIVWLRSCSCHSSVCAVSFVMQCS 38


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 519 NPLARPTTSFLVSHSW 472
           NP++RPT + ++ H W
Sbjct: 241 NPISRPTITEVLDHPW 256


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 20/77 (25%), Positives = 39/77 (50%)
 Frame = +2

Query: 80   KLTMLESLFDDVRRMNKRQFMYQVLSFGMIVSSALMIWKGLMVVTGSESPIVVVLSGSME 259
            K   +  L+DDVR+    +FM     F +I      +++  M+  G ++ + +V   SM+
Sbjct: 1112 KRNEMRQLYDDVRKKRFTEFM---RGFHIITKKLKEMYQ--MITLGGDAELELV--DSMD 1164

Query: 260  PAFHRGDLLFLTNYPEE 310
            P F+ G ++F    P++
Sbjct: 1165 P-FNEG-IVFSVRPPKK 1179


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 711,973
Number of Sequences: 2352
Number of extensions: 15286
Number of successful extensions: 39
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)