Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_B03
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    25   0.54 
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    25   0.54 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    24   0.95 
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   2.2  
EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    22   5.1  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +2

Query: 140 IGTVIFNMSTNMNFWRVIAVMCVATAFVQSKSXHHQKRATRPNI 271
           I  V+F   TNM F  V AV+ V +  +      H+    RP+I
Sbjct: 446 INGVLFVFLTNMTFQNVFAVINVFSGELPVFLQEHRNGMYRPSI 489


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 25.0 bits (52), Expect = 0.54
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +2

Query: 140 IGTVIFNMSTNMNFWRVIAVMCVATAFVQSKSXHHQKRATRPNI 271
           I  V+F   TNM F  V AV+ V +  +      H+    RP+I
Sbjct: 446 INGVLFVFLTNMTFQNVFAVINVFSGELPVFLQEHRNGMYRPSI 489


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 24.2 bits (50), Expect = 0.95
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 285 TITHWTFDVTAPKTIKIRRYLKALI 359
           T+ H+T D  +  ++K  +YLK L+
Sbjct: 3   TLQHFTIDTRSTHSMKNFKYLKVLV 27


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 8/27 (29%), Positives = 16/27 (59%)
 Frame = -3

Query: 544 FLYITIFNV*VEYRFCVFQRLSRYIFH 464
           F +IT+  + + ++ C F RL+  + H
Sbjct: 449 FTFITLLTIGLYFQLCEFSRLNFSVEH 475


>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +2

Query: 512 NLDIKYGNIEKVGAYAFAN 568
           NLD+  GN++K  A    N
Sbjct: 71  NLDVNQGNLKKFNALKLKN 89


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,413
Number of Sequences: 336
Number of extensions: 3022
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)