Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_B03
         (654 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   4.8  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   6.4  
AF269156-1|AAF91401.1|   52|Anopheles gambiae transcription fact...    23   6.4  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    23   8.4  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +2

Query: 407 AFDYLKDVTKLTFTKNNITMKYIPTEALKYTKSVLNLDIKYGNIEK 544
           A +YLK    LT T+N    KY+  +  K  +  +  D   G + K
Sbjct: 293 AVEYLKQENTLTRTRNQQIQKYLCEQKRKIGEFEVERDQAAGILAK 338


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = -3

Query: 193  DHPPEVHVG*HIKNDSSNFLFKNNSLESHYNIIALFKFRTRHILR 59
            DHPP+V V  +I  D     F  N  +  Y +I   +   R ++R
Sbjct: 2596 DHPPDVRVTSYIYKDQQLIGFVRN--DKLYGVITDHEGSVRLVVR 2638


>AF269156-1|AAF91401.1|   52|Anopheles gambiae transcription factor
           zen protein.
          Length = 52

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 119 SRESLQHHCTIQISNETHSSNSLCPPRK 36
           SR +      +++  E HS+  LC PR+
Sbjct: 3   SRTAFTSSQLVELEKEFHSNRYLCRPRR 30


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -2

Query: 65  SSNSLCPPRKHVYAPS 18
           SSNS+ PP  H  +PS
Sbjct: 454 SSNSIPPPSNHCSSPS 469


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 624,056
Number of Sequences: 2352
Number of extensions: 11610
Number of successful extensions: 22
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)