Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_B01
(668 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;... 184 2e-45
UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11; ... 183 4e-45
UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3; M... 170 3e-41
UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27... 149 8e-35
UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10... 148 1e-34
UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;... 136 3e-31
UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4; E... 118 1e-25
UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14; ... 118 1e-25
UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12; ... 117 2e-25
UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2; D... 117 2e-25
UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1; E... 115 1e-24
UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6; P... 114 2e-24
UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2; T... 102 7e-21
UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1; G... 101 1e-20
UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1; E... 99 5e-20
UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6; T... 94 2e-18
UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyc... 93 7e-18
UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1; G... 87 4e-16
UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protei... 56 1e-15
UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga ... 79 1e-13
UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=... 79 1e-13
UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiell... 75 1e-12
UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum... 75 2e-12
UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;... 73 8e-12
UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum... 70 4e-11
UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=... 69 8e-11
UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339... 68 2e-10
UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1; Methan... 67 3e-10
UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=... 66 1e-09
UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus ... 64 2e-09
UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1; Staphylothe... 63 5e-09
UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=... 63 5e-09
UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=... 62 2e-08
UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=... 59 8e-08
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 58 3e-07
UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:... 58 3e-07
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 57 4e-07
UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2; ... 56 6e-07
UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4; Methanomicr... 52 1e-05
UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1; uncult... 51 2e-05
UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1; uncul... 51 3e-05
UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=... 50 5e-05
UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaet... 50 7e-05
UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lambl... 45 0.002
UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2; ... 43 0.008
UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole geno... 39 0.095
UniRef50_Q08XA8 Cluster: Secretion protein HlyD, putative; n=2; ... 37 0.38
UniRef50_A3Y9U7 Cluster: Putative uncharacterized protein; n=1; ... 37 0.51
UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma j... 36 0.67
UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17; ... 36 0.67
UniRef50_A0X4T2 Cluster: Putative outer membrane adhesin like pr... 35 2.0
UniRef50_Q58J68 Cluster: Mitochondrial SBP40; n=1; Solanum tuber... 35 2.0
UniRef50_Q5KM60 Cluster: Ribosomal protein, putative; n=1; Filob... 35 2.0
UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=... 35 2.0
UniRef50_P14222 Cluster: Perforin-1 precursor; n=23; Mammalia|Re... 34 3.6
UniRef50_UPI0000428949 Cluster: PREDICTED: hypothetical protein;... 33 6.2
UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD470... 33 6.2
UniRef50_A4S8Z4 Cluster: Predicted protein; n=2; Ostreococcus|Re... 33 8.2
UniRef50_A4HBP4 Cluster: Putative uncharacterized protein; n=1; ... 33 8.2
>UniRef50_P05388 Cluster: 60S acidic ribosomal protein P0; n=171;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Homo
sapiens (Human)
Length = 317
Score = 184 bits (448), Expect = 2e-45
Identities = 87/118 (73%), Positives = 99/118 (83%)
Frame = +2
Query: 314 KLLPHIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKXS 493
KLLPHI GNVGFVFT+ DL E+RD LL NKV A AR GAIAP V +PA NTGLGPEK S
Sbjct: 77 KLLPHIRGNVGFVFTKEDLTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTS 136
Query: 494 FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXVYD 667
FFQAL I TKIS+GTIEI++DV ++K GDKVGASEATLLNM NISPFS+GLV++ V+D
Sbjct: 137 FFQALGITTKISRGTIEILSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFD 194
Score = 141 bits (341), Expect = 2e-32
Identities = 63/75 (84%), Positives = 72/75 (96%)
Frame = +1
Query: 85 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 264
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 265 MRKAIKDHLDNNPAL 309
MRKAI+ HL+NNPAL
Sbjct: 61 MRKAIRGHLENNPAL 75
>UniRef50_Q9PV90 Cluster: 60S acidic ribosomal protein P0; n=11;
Eukaryota|Rep: 60S acidic ribosomal protein P0 - Danio
rerio (Zebrafish) (Brachydanio rerio)
Length = 319
Score = 183 bits (445), Expect = 4e-45
Identities = 89/121 (73%), Positives = 100/121 (82%), Gaps = 3/121 (2%)
Frame = +2
Query: 314 KLLPHIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKXS 493
+LLPHI GNVGFVFT+ DL EVRD LL NKV A AR GAIAP V +PA NTGLGPEK S
Sbjct: 77 RLLPHIRGNVGFVFTKEDLTEVRDLLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTS 136
Query: 494 FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATL---LNMXNISPFSYGLVVKXVY 664
FFQAL I TKIS+GTIEI++DV ++KPGDKVGASEATL LNM NISPFSYGL+++ VY
Sbjct: 137 FFQALGITTKISRGTIEILSDVQLIKPGDKVGASEATLLNMLNMLNISPFSYGLIIQQVY 196
Query: 665 D 667
D
Sbjct: 197 D 197
Score = 137 bits (332), Expect = 2e-31
Identities = 61/75 (81%), Positives = 71/75 (94%)
Frame = +1
Query: 85 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 264
M RED+ATWKSNYF+KIIQLLD++PKCFIVGADNVGS+QMQ IR+SLRG ++VLMGKNTM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDFPKCFIVGADNVGSKQMQTIRLSLRGKAVVLMGKNTM 60
Query: 265 MRKAIKDHLDNNPAL 309
MRKAI+ HL+NNPAL
Sbjct: 61 MRKAIRGHLENNPAL 75
>UniRef50_Q4KTH7 Cluster: 60S acidic ribosomal protein P0; n=3;
Metazoa|Rep: 60S acidic ribosomal protein P0 - Suberites
domuncula (Sponge)
Length = 313
Score = 170 bits (413), Expect = 3e-41
Identities = 77/118 (65%), Positives = 98/118 (83%)
Frame = +2
Query: 314 KLLPHIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKXS 493
K+LPH+ GN+GFVFT D+V++R+ +L N+V APA+ GAIAP+ V +PA NTGLGPEK S
Sbjct: 77 KVLPHVKGNIGFVFTHEDMVDIREIMLSNQVGAPAKAGAIAPVDVFVPASNTGLGPEKTS 136
Query: 494 FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXVYD 667
FFQALSI TKIS+GTIEI+++VH++K G+KVGASEATLL M I PF+YGL + VYD
Sbjct: 137 FFQALSIATKISRGTIEILSEVHLIKIGEKVGASEATLLQMLKIFPFTYGLKIVQVYD 194
Score = 110 bits (265), Expect = 3e-23
Identities = 50/82 (60%), Positives = 63/82 (76%)
Frame = +1
Query: 85 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 264
MGREDKA WKSNY ++++ L DEY + +V DNVGS+QMQQIRISLRG + +LMGKNT
Sbjct: 1 MGREDKAAWKSNYVMRLLSLFDEYKRVLLVNVDNVGSKQMQQIRISLRGKATILMGKNTT 60
Query: 265 MRKAIKDHLDNNPALXETVATH 330
+RKA++ HL+ NP L E V H
Sbjct: 61 IRKALRGHLEQNPNL-EKVLPH 81
>UniRef50_O04204 Cluster: 60S acidic ribosomal protein P0-1; n=27;
Eukaryota|Rep: 60S acidic ribosomal protein P0-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 317
Score = 149 bits (360), Expect = 8e-35
Identities = 71/122 (58%), Positives = 89/122 (72%)
Frame = +2
Query: 302 QPSXKLLPHIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 481
Q LLP + GNVG +FT+GDL EV +++ + KV APAR G +AP+ VV+ NTGL P
Sbjct: 76 QAFLSLLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDP 135
Query: 482 EKXSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXV 661
+ SFFQ L+IPTKI+KGT+EII V ++K GDKVG+SEA LL I PFSYGLVV+ V
Sbjct: 136 SQTSFFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSEAALLAKLGIRPFSYGLVVESV 195
Query: 662 YD 667
YD
Sbjct: 196 YD 197
Score = 76.2 bits (179), Expect = 7e-13
Identities = 36/65 (55%), Positives = 47/65 (72%)
Frame = +1
Query: 100 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI 279
KA K Y K+ QLL+EY + +V ADNVGS Q+Q IR LRG S+VLMGKNTMM++++
Sbjct: 7 KAEKKIVYDSKLCQLLNEYSQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTMMKRSV 66
Query: 280 KDHLD 294
+ H D
Sbjct: 67 RIHAD 71
>UniRef50_P57691 Cluster: 60S acidic ribosomal protein P0-3; n=10;
Eukaryota|Rep: 60S acidic ribosomal protein P0-3 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 323
Score = 148 bits (359), Expect = 1e-34
Identities = 70/117 (59%), Positives = 88/117 (75%)
Frame = +2
Query: 317 LLPHIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKXSF 496
LLP + GNVG +FT+GDL EV +++ + KV APAR G +AP+ VV+ NTGL P + SF
Sbjct: 80 LLPLLQGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTSF 139
Query: 497 FQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXVYD 667
FQ L+IPTKI+KGT+EII V ++K GDKVG+SEA LL I PFSYGLVV+ VYD
Sbjct: 140 FQVLNIPTKINKGTVEIITPVELIKQGDKVGSSEAALLAKLGIRPFSYGLVVQSVYD 196
Score = 80.2 bits (189), Expect = 4e-14
Identities = 37/72 (51%), Positives = 51/72 (70%)
Frame = +1
Query: 85 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 264
M + KA K Y K+ QL+DEY + +V ADNVGS Q+Q IR LRG S+VLMGKNTM
Sbjct: 1 MVKATKAEKKIAYDTKLCQLIDEYTQILVVAADNVGSTQLQNIRKGLRGDSVVLMGKNTM 60
Query: 265 MRKAIKDHLDNN 300
M+++++ H +N+
Sbjct: 61 MKRSVRIHSENS 72
>UniRef50_UPI0000499842 Cluster: 60S acidic ribosomal protein P0;
n=3; Entamoeba histolytica HM-1:IMSS|Rep: 60S acidic
ribosomal protein P0 - Entamoeba histolytica HM-1:IMSS
Length = 316
Score = 136 bits (330), Expect = 3e-31
Identities = 62/118 (52%), Positives = 86/118 (72%)
Frame = +2
Query: 314 KLLPHIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKXS 493
+LLPHI GNVGF+FT+GDL +++ KL E K +PA+ G IAP V++PA +TGL P + +
Sbjct: 84 ELLPHIKGNVGFIFTKGDLYQLKAKLTELKAPSPAKAGVIAPNDVIVPAGDTGLDPTQTN 143
Query: 494 FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXVYD 667
F QAL+I +KI+KG IEI ++ ++K G+KVG S+A LL I+PF YG V+ VYD
Sbjct: 144 FVQALNIASKITKGQIEITSETLLIKEGEKVGVSQAVLLQKLKINPFKYGAVIDVVYD 201
Score = 74.5 bits (175), Expect = 2e-12
Identities = 36/77 (46%), Positives = 49/77 (63%)
Frame = +1
Query: 85 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 264
+ +E K K Y VK+ +LL+EY + +V DNVGS Q Q IR LRG+ +MGKNT+
Sbjct: 8 LSKEQKKAKKEAYLVKMKKLLEEYKQVVVVKCDNVGSSQFQTIRKELRGTCEFVMGKNTL 67
Query: 265 MRKAIKDHLDNNPALXE 315
+RKAIK+ + P L E
Sbjct: 68 IRKAIKNQAETQPELEE 84
>UniRef50_Q52H32 Cluster: 60S acidic ribosomal protein P0; n=4;
Euplotes|Rep: 60S acidic ribosomal protein P0 - Euplotes
minuta
Length = 333
Score = 118 bits (284), Expect = 1e-25
Identities = 59/127 (46%), Positives = 82/127 (64%)
Frame = +2
Query: 287 TWTTIQPSXKLLPHIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHN 466
TWT I L+ + GN+G +FT DL +++D + + +APAR G++A V I A
Sbjct: 86 TWTPIPHMEPLVRLLKGNLGIIFTNHDLTDIKDIIDRHTREAPARVGSVAQCDVWIKAGG 145
Query: 467 TGLGPEKXSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGL 646
TGL P++ +FFQ L+IPTKI+K IEI D I+ G+KVG++EA LL NI+PFSY L
Sbjct: 146 TGLDPKQTAFFQNLAIPTKIAKAQIEISADKQIITEGEKVGSNEAALLQKLNINPFSYKL 205
Query: 647 VVKXVYD 667
V V+D
Sbjct: 206 SVAHVFD 212
Score = 52.8 bits (121), Expect = 7e-06
Identities = 24/88 (27%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Frame = +1
Query: 85 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR-GSSIVLMGKNT 261
M +DK K+ +F ++ + D+Y + +V DN+ ++Q+ R LR +S++LMG+NT
Sbjct: 1 MAGKDKKAKKNEFFERVYNVFDKYTRALLVKCDNISARQIHACRKELRSNNSLMLMGENT 60
Query: 262 MMRKAIKDHLDNNPALXETVATHQXQRW 345
+++ A++ + + P E+ + + W
Sbjct: 61 LIKAALQKRI-SKPIESESDFEERSKTW 87
>UniRef50_Q94660 Cluster: 60S acidic ribosomal protein P0; n=14;
Apicomplexa|Rep: 60S acidic ribosomal protein P0 -
Plasmodium falciparum (isolate 7G8)
Length = 316
Score = 118 bits (284), Expect = 1e-25
Identities = 62/119 (52%), Positives = 81/119 (68%), Gaps = 1/119 (0%)
Frame = +2
Query: 314 KLLPHIXGNVGFVFTRGDLVEVRDKLLENKVQA-PARPGAIAPLSVVIPAHNTGLGPEKX 490
KLLP + N+GFVF + DL E+R+ +L+NK + PAR G IAP+ V IP TG+ P
Sbjct: 77 KLLPLVKLNMGFVFCKDDLSEIRNIILDNKSSSHPARLGVIAPIDVFIPPGPTGMDPSHT 136
Query: 491 SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXVYD 667
SF ++L I TKI KG IEI VH++K G+KV AS ATLL N++P SYG+ V+ VYD
Sbjct: 137 SFLESLGISTKIVKGQIEIQEHVHLIKQGEKVTASSATLLRKFNMNP-SYGVDVRTVYD 194
Score = 66.9 bits (156), Expect = 4e-10
Identities = 33/75 (44%), Positives = 44/75 (58%)
Frame = +1
Query: 85 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 264
M + K K Y K+ L+ +Y K IV DNVGS QM +R SLRG + +LMGKNT
Sbjct: 1 MAKLSKQQKKQMYIEKLSSLIQQYSKILIVHVDNVGSNQMASVRKSLRGKATILMGKNTR 60
Query: 265 MRKAIKDHLDNNPAL 309
+R A+K +L P +
Sbjct: 61 IRTALKKNLQAVPQI 75
>UniRef50_P26796 Cluster: 60S acidic ribosomal protein P0; n=12;
Trypanosomatidae|Rep: 60S acidic ribosomal protein P0 -
Trypanosoma cruzi
Length = 323
Score = 117 bits (282), Expect = 2e-25
Identities = 56/111 (50%), Positives = 78/111 (70%)
Frame = +2
Query: 335 GNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKXSFFQALSI 514
GN +FT ++ + L +++VQAPAR GAIAP V++PA NTG+ P+ SFFQAL+I
Sbjct: 91 GNTALIFTNEEIPVITAVLDKHRVQAPARVGAIAPCDVIVPAGNTGMEPKATSFFQALNI 150
Query: 515 PTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXVYD 667
TKI+KGT+EI++D +L GD+V S ATLL +ISPF Y + V+ V+D
Sbjct: 151 ATKIAKGTVEIVSDKKVLSVGDRVDNSTATLLQKLDISPFYYQVEVQSVWD 201
Score = 39.5 bits (88), Expect = 0.072
Identities = 20/65 (30%), Positives = 33/65 (50%)
Frame = +1
Query: 112 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 291
K Y + L +Y + DNV SQQ+ +R LRG ++MGK T+ +K ++
Sbjct: 8 KREYEERFNGCLTKYGRVLFCLMDNVRSQQVHDVRRDLRGLGELVMGKKTLQKKIVERRA 67
Query: 292 DNNPA 306
++ A
Sbjct: 68 EDKKA 72
>UniRef50_P22685 Cluster: 60S acidic ribosomal protein P0; n=2;
Dictyostelium discoideum|Rep: 60S acidic ribosomal
protein P0 - Dictyostelium discoideum (Slime mold)
Length = 305
Score = 117 bits (282), Expect = 2e-25
Identities = 55/114 (48%), Positives = 76/114 (66%)
Frame = +2
Query: 326 HIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKXSFFQA 505
++ N +F + ++ EV+ + +V APA+ G AP V+IPA TG+ P + SF Q
Sbjct: 80 YLKQNTCIIFCKDNIAEVKRVINTQRVGAPAKAGVFAPNDVIIPAGPTGMEPTQTSFLQD 139
Query: 506 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXVYD 667
L I TKI++G I+I+N+VHI+K G KVGASEATLL NI PF+YGL K +YD
Sbjct: 140 LKIATKINRGQIDIVNEVHIIKTGQKVGASEATLLQKLNIKPFTYGLEPKIIYD 193
Score = 62.1 bits (144), Expect = 1e-08
Identities = 31/66 (46%), Positives = 40/66 (60%)
Frame = +1
Query: 112 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 291
K + K +L Y K + AD VGS Q+Q+IR S+RG VLMGK TM+RK I+D
Sbjct: 9 KKLFIEKATKLFTTYDKMIVAEADFVGSSQLQKIRKSIRGIGAVLMGKKTMIRKVIRDLA 68
Query: 292 DNNPAL 309
D+ P L
Sbjct: 69 DSKPEL 74
>UniRef50_Q9U7P1 Cluster: 60S acidic ribosomal protein P0; n=1;
Eufolliculina uhligi|Rep: 60S acidic ribosomal protein
P0 - Eufolliculina uhligi
Length = 324
Score = 115 bits (276), Expect = 1e-24
Identities = 59/129 (45%), Positives = 78/129 (60%)
Frame = +2
Query: 281 KTTWTTIQPSXKLLPHIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPA 460
K TWT L+P + GNV +F ++ EV + E+KV A A+ G IAP V +
Sbjct: 76 KNTWTPKPELEHLIPLLRGNVCLIFCHAEMGEVLSAVEESKVPAEAKAGTIAPNDVHVYP 135
Query: 461 HNTGLGPEKXSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSY 640
TG+ P + SFFQAL I TKI KG I+I+N++H++ KVG SEA LL + PFS+
Sbjct: 136 GPTGMDPSQTSFFQALGIFTKIVKGQIDIVNELHLIFKDKKVGNSEAVLLKKLGVKPFSF 195
Query: 641 GLVVKXVYD 667
GL VK VYD
Sbjct: 196 GLKVKNVYD 204
Score = 55.6 bits (128), Expect = 1e-06
Identities = 25/60 (41%), Positives = 40/60 (66%)
Frame = +1
Query: 112 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDHL 291
K +Y+ K+ L++E P+ I A+NVGS+Q+Q +R LR + +L GKNT++R +K L
Sbjct: 3 KYDYWEKLWTLIEEAPRILICEANNVGSKQLQDLRRVLRNKATILFGKNTLIRAGLKHRL 62
>UniRef50_A0DDF2 Cluster: 60S acidic ribosomal protein P0; n=6;
Paramecium tetraurelia|Rep: 60S acidic ribosomal protein
P0 - Paramecium tetraurelia
Length = 323
Score = 114 bits (275), Expect = 2e-24
Identities = 55/113 (48%), Positives = 70/113 (61%)
Frame = +2
Query: 329 IXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKXSFFQAL 508
+ G VGF+FT + +++ + ENKV+ PAR GA+AP+ VVIP TG+ P FF AL
Sbjct: 100 VAGKVGFIFTDTPVFDLKPIIEENKVETPARVGAVAPIDVVIPPGPTGMDPASIQFFHAL 159
Query: 509 SIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXVYD 667
IPTKI KG I+I D +LK G KVG S+A LL PF YG+ V YD
Sbjct: 160 QIPTKIEKGQIQITKDFVVLKTGQKVGQSQAVLLQKLGKKPFLYGMEVLACYD 212
Score = 55.2 bits (127), Expect = 1e-06
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Frame = +1
Query: 85 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQI-RISLRGSSIVLMGKNT 261
MG+++ K F KI +LL +Y + IVG NVGS+Q+Q I RI + ++++++GKNT
Sbjct: 1 MGKKETKDKKPTQFKKIYELLSKYTQVIIVGLANVGSKQVQDIRRILAKRNALLVIGKNT 60
Query: 262 MMRKAIKDHLDNNP 303
+ +K + + P
Sbjct: 61 LFKKVLATRVQELP 74
>UniRef50_Q22HK6 Cluster: 60S acidic ribosomal protein P0; n=2;
Tetrahymena thermophila|Rep: 60S acidic ribosomal
protein P0 - Tetrahymena thermophila SB210
Length = 324
Score = 102 bits (245), Expect = 7e-21
Identities = 50/117 (42%), Positives = 68/117 (58%)
Frame = +2
Query: 317 LLPHIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKXSF 496
L+PH+ + +VF + ++ K+ V APAR G +A V+IP TG+ P + +F
Sbjct: 96 LIPHLKNKIAYVFHNDPIFALKPKIESFVVPAPARVGTVAQKDVMIPPGPTGMDPSQINF 155
Query: 497 FQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXVYD 667
F ALSI TKI KG IEI +V + G K+G SE +LL NI PFSYG+ YD
Sbjct: 156 FHALSISTKIQKGQIEITKEVQVCTKGKKIGNSEVSLLEKMNIQPFSYGMKCFSDYD 212
Score = 53.6 bits (123), Expect = 4e-06
Identities = 25/62 (40%), Positives = 41/62 (66%)
Frame = +1
Query: 97 DKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKA 276
DK K + + +LL +Y + +NVGS Q+QQIR SL ++I+++GKNT++RKA
Sbjct: 7 DKKAKKDAFIRRFYELLSKYDSIALCTLENVGSLQLQQIRRSLGSNNIMVIGKNTVVRKA 66
Query: 277 IK 282
++
Sbjct: 67 VQ 68
>UniRef50_Q7QU12 Cluster: 60S acidic ribosomal protein P0; n=1;
Giardia lamblia ATCC 50803|Rep: 60S acidic ribosomal
protein P0 - Giardia lamblia ATCC 50803
Length = 326
Score = 101 bits (243), Expect = 1e-20
Identities = 53/117 (45%), Positives = 69/117 (58%)
Frame = +2
Query: 317 LLPHIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKXSF 496
LLP+I NV FVFT GD + + K +A A+ G +AP VVI T GP++ F
Sbjct: 79 LLPYIKLNVAFVFTNGDTSAILKAFKKTKRKAAAKAGIVAPADVVIEPMLTQSGPDQHGF 138
Query: 497 FQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXVYD 667
+ AL I TKI+KG IEI+N V+++K GD V S ATLL I PF Y + +YD
Sbjct: 139 YAALGIDTKINKGKIEIVNPVNLIKKGDIVTPSHATLLQRLEIDPFFYAMSALNLYD 195
Score = 50.0 bits (114), Expect = 5e-05
Identities = 27/67 (40%), Positives = 41/67 (61%)
Frame = +1
Query: 100 KATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI 279
K + Y K+ + L EY K +V DNV S Q+ QIR LRG + +L GKNT++++ I
Sbjct: 9 KQARRQAYVAKLERCLTEYKKIVLVSVDNVRSFQIAQIRRLLRGKAELLAGKNTIIKRVI 68
Query: 280 KDHLDNN 300
+ LD++
Sbjct: 69 -NQLDDD 74
>UniRef50_Q8SRJ7 Cluster: 60S ACIDIC RIBOSOMAL PROTEIN P0; n=1;
Encephalitozoon cuniculi|Rep: 60S ACIDIC RIBOSOMAL
PROTEIN P0 - Encephalitozoon cuniculi
Length = 290
Score = 99 bits (238), Expect = 5e-20
Identities = 48/113 (42%), Positives = 73/113 (64%)
Frame = +2
Query: 329 IXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKXSFFQAL 508
+ G+V FVF +G+ +++ + EN +A A+ G +A V + + TG+ P+K S+FQAL
Sbjct: 104 VKGDVCFVFFKGNARDIKKAIDENVREACAKVGNVAQRDVWVESCITGMTPDKTSYFQAL 163
Query: 509 SIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXVYD 667
I TKI+KG +EII+ +L GDKVG S+A LL M NI PF Y + + +Y+
Sbjct: 164 GIATKITKGKVEIISPYKVLSEGDKVGPSQANLLGMLNIKPFCYKMTMHQIYE 216
Score = 41.5 bits (93), Expect = 0.018
Identities = 22/67 (32%), Positives = 39/67 (58%)
Frame = +1
Query: 85 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 264
M R+D K + + +L + Y + +V +NV S Q++ I+ G++ +LMGKN+
Sbjct: 25 MTRKDAKERKELTYERARKLFETYSRFALVKIENVVSTQLKDIKRQWGGNAELLMGKNSA 84
Query: 265 MRKAIKD 285
+R+AI D
Sbjct: 85 IRRAIAD 91
>UniRef50_A2EES5 Cluster: 60S acidic ribosomal protein P0; n=6;
Trichomonas vaginalis G3|Rep: 60S acidic ribosomal
protein P0 - Trichomonas vaginalis G3
Length = 318
Score = 94.3 bits (224), Expect = 2e-18
Identities = 45/118 (38%), Positives = 67/118 (56%)
Frame = +2
Query: 314 KLLPHIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKXS 493
+L H+ G +FT G+ ++D + N + + A+ GAIAP V++ T + P
Sbjct: 79 QLEEHLYHGAGLIFTNGNFKAIKDVIDANCLGSAAKVGAIAPCDVILQPQRTSMSPNDIK 138
Query: 494 FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXVYD 667
AL+I KI KGTIEI + ++ G KVGASEA +LN+ I PF Y L ++ +YD
Sbjct: 139 ILHALNIQCKIFKGTIEITGEKQLIWEGQKVGASEANILNILGIMPFKYTLKIEALYD 196
Score = 39.1 bits (87), Expect = 0.095
Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Frame = +1
Query: 112 KSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSI-VLMGKNTMMRKAIKDH 288
K +Y K+ L +Y K +V + NV + Q+ IR L VL GKN++MR+A+
Sbjct: 11 KLDYVTKLHALFRKYHKVVVVTSMNVTANQLLNIRAGLAEHGCEVLFGKNSLMRRAVDQL 70
Query: 289 LDNNPALXE 315
+ P + +
Sbjct: 71 KEELPGIRQ 79
>UniRef50_Q6CW90 Cluster: Similarities with sp|O94085 Saccharomyces
cerevisiae YLR339CP; n=1; Kluyveromyces lactis|Rep:
Similarities with sp|O94085 Saccharomyces cerevisiae
YLR339CP - Kluyveromyces lactis (Yeast) (Candida
sphaerica)
Length = 309
Score = 92.7 bits (220), Expect = 7e-18
Identities = 48/118 (40%), Positives = 69/118 (58%), Gaps = 1/118 (0%)
Frame = -2
Query: 667 IIYXLNN-KTI*EWRDVXHVEKGGFRSSNLVTGLQDVYIVDDFNSTL*NLGRDRKSLEER 491
++ LN+ +T+ EWR+V V++ FRS++ +T + D+ + D+FN T NLG + +SLEER
Sbjct: 132 VVVNLNDGQTVGEWRNVQQVQQRSFRSTDSLTSVNDLNVRDNFNGTSGNLGWNTQSLEER 191
Query: 490 XLLWTEAGVVGGNDD*QWGNGTRTSWSLDFVLQQFVTDLNEVSAGEHEANVAXDVWQQ 317
L W GV G N D WGN T + WS + V D+ + GE E NV D QQ
Sbjct: 192 SLTWFHTGVDGENPDIFWGNSTSSGWSGNLVGDDDFLDILQGIVGEDETNVTLDERQQ 249
>UniRef50_Q98S65 Cluster: 60S acidic ribosomal protein P0; n=1;
Guillardia theta|Rep: 60S acidic ribosomal protein P0 -
Guillardia theta (Cryptomonas phi)
Length = 297
Score = 87.0 bits (206), Expect = 4e-16
Identities = 45/120 (37%), Positives = 67/120 (55%)
Frame = +2
Query: 308 SXKLLPHIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK 487
S ++L I GNV F+FT D +++ L N + A+ G +A V + T + P+
Sbjct: 74 SNEILTKINGNVSFIFTNEDPFFIQEILKNNSLPTAAKIGQVAQSDVYLSQGLTNISPDG 133
Query: 488 XSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXVYD 667
FQ+L+IPTKI KG IEII + +L+ G K+ +EATLL NI PF + + Y+
Sbjct: 134 IGIFQSLNIPTKILKGQIEIITNFKVLEKGKKINEAEATLLQKLNILPFYNEIKIISFYE 193
>UniRef50_Q16RH9 Cluster: Temporarily assignedprotein name protein;
n=2; Culicidae|Rep: Temporarily assignedprotein name
protein - Aedes aegypti (Yellowfever mosquito)
Length = 1309
Score = 55.6 bits (128), Expect(2) = 1e-15
Identities = 25/31 (80%), Positives = 28/31 (90%)
Frame = +2
Query: 314 KLLPHIXGNVGFVFTRGDLVEVRDKLLENKV 406
KLLPHI VGFVFT+GDLVEVRDKL+E+KV
Sbjct: 707 KLLPHIKSYVGFVFTKGDLVEVRDKLMESKV 737
Score = 50.0 bits (114), Expect(2) = 1e-15
Identities = 24/28 (85%), Positives = 25/28 (89%)
Frame = +2
Query: 503 ALSIPTKISKGTIEIINDVHILKPGDKV 586
ALSIP KISKGTIEIINDV ILK GDK+
Sbjct: 738 ALSIPIKISKGTIEIINDVPILKSGDKI 765
>UniRef50_A3H9G5 Cluster: Ribosomal protein L10; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein L10 -
Caldivirga maquilingensis IC-167
Length = 303
Score = 78.6 bits (185), Expect = 1e-13
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Frame = +2
Query: 326 HIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKX-SFFQ 502
++ G GF+FT + ++ +++N V+ A+PG + +++PA NTG+ P S F
Sbjct: 92 YLSGENGFIFTNENPFDLYRIIVDNSVRRYAKPGDVLQSDIIVPAGNTGINPGPVLSRFS 151
Query: 503 ALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXV 661
L IPT+I G I + D + KPGD V A LL + N+ P L VK V
Sbjct: 152 KLKIPTQIRDGKIWVARDTQVAKPGDTVTPELADLLRLINVKPVYESLKVKAV 204
>UniRef50_O74109 Cluster: Acidic ribosomal protein P0 homolog; n=8;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Pyrococcus horikoshii
Length = 342
Score = 78.6 bits (185), Expect = 1e-13
Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 1/119 (0%)
Frame = +2
Query: 314 KLLPHIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKX- 490
KL+ +I G + T + ++ L +N+ APA+PGA+ P VV+PA T L P
Sbjct: 78 KLVEYIDRGAGILVTNMNPFKLYKFLQQNRQPAPAKPGAVVPKDVVVPAGPTPLAPGPIV 137
Query: 491 SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXVYD 667
QAL IP +I KG + I D +LK G+ + A +LN I P GL V VY+
Sbjct: 138 GQMQALGIPARIEKGKVTIQKDTTVLKAGEVITPELANILNALGIQPLEVGLDVLAVYE 196
>UniRef50_Q3LWA7 Cluster: Ribosomal protein L10; n=1; Bigelowiella
natans|Rep: Ribosomal protein L10 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 251
Score = 75.4 bits (177), Expect = 1e-12
Identities = 35/113 (30%), Positives = 61/113 (53%)
Frame = +2
Query: 326 HIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKXSFFQA 505
++ N+G +FT +L + + + + + G IA +++I L P + FFQA
Sbjct: 76 YLSDNIGLIFTNSNLKILNETFKQYFLTSFVNAGEIAQRNIIIKKGIKNLSPSQTPFFQA 135
Query: 506 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXVY 664
L IPT+ISK +IEII D+ ++ + S+ LL +I P YG+ +K ++
Sbjct: 136 LGIPTRISKSSIEIIEDILLVSKNQALNKSQEVLLKKLDIKPHKYGVKIKKIF 188
Score = 39.9 bits (89), Expect = 0.054
Identities = 18/53 (33%), Positives = 33/53 (62%)
Frame = +1
Query: 130 KIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKDH 288
K I LL+ Y IV +N+ S+Q+ IR LRG+S +++GK + + ++++
Sbjct: 11 KFISLLNSYDTMVIVNMNNIRSKQIHDIRKHLRGTSEIVVGKKSFLSYLLQNN 63
>UniRef50_A1RWQ2 Cluster: Ribosomal protein L10; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein L10 - Thermofilum
pendens (strain Hrk 5)
Length = 294
Score = 74.9 bits (176), Expect = 2e-12
Identities = 40/114 (35%), Positives = 59/114 (51%), Gaps = 1/114 (0%)
Frame = +2
Query: 326 HIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-EKXSFFQ 502
H+ G +FT + E+ L + K+ AR G IA +V+PA NTG+ P S F
Sbjct: 86 HLRGQNAVIFTNKNPFEILFFLDKQKIMREARAGDIATSEIVLPAGNTGIPPGPMISNFN 145
Query: 503 ALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXVY 664
L IPT++ +G+I I D + KPGD + A LL+ + P L +K +Y
Sbjct: 146 KLGIPTRVQEGSIWIAKDTVVAKPGDVISPELAELLSKLGLKPIESKLQIKTIY 199
>UniRef50_UPI00015BB116 Cluster: LSU ribosomal protein L10P; n=1;
Ignicoccus hospitalis KIN4/I|Rep: LSU ribosomal protein
L10P - Ignicoccus hospitalis KIN4/I
Length = 346
Score = 72.5 bits (170), Expect = 8e-12
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Frame = +2
Query: 329 IXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKX-SFFQA 505
+ G+ F+FT + ++ K+ + + APA+PG +A +V+PA +TGL P S F
Sbjct: 91 LVGSNMFIFTNDNPFKLALKISKFSMPAPAKPGDVAQSEIVVPAGDTGLTPGPILSTFGK 150
Query: 506 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXVY 664
L I T + GTI I D + KPGD + A+LL I+P + +K Y
Sbjct: 151 LKIKTMVKGGTIHIAKDTVVAKPGDVISPELASLLQKLGITPMELKMKIKGAY 203
>UniRef50_A0RX06 Cluster: Ribosomal protein L10; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L10 - Cenarchaeum
symbiosum
Length = 274
Score = 70.1 bits (164), Expect = 4e-11
Identities = 40/114 (35%), Positives = 58/114 (50%), Gaps = 1/114 (0%)
Frame = +2
Query: 293 TTIQPSXKLLPHIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 472
T + K++ + G F+FT + L +NK AR G IA + V +PA NTG
Sbjct: 56 TDVPGMDKMMDQLTGQCMFMFTDISPFTLNVLLKKNKTMMAARAGDIASIDVTVPAKNTG 115
Query: 473 LGP-EKXSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISP 631
+ P + F+ IPTKI +GTI I+ D +K G+ +G A LL +I P
Sbjct: 116 IAPGPMLTEFKEAGIPTKIDQGTIWILKDTTPVKKGEPIGDKLAPLLGKLDIKP 169
>UniRef50_Q8TX50 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Euryarchaeota|Rep: Acidic ribosomal protein P0 homolog -
Methanopyrus kandleri
Length = 357
Score = 69.3 bits (162), Expect = 8e-11
Identities = 38/116 (32%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Frame = +2
Query: 317 LLPHIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-XS 493
LL +I G V F+FT D ++ L E+K APA+PG IAP +V+P T P S
Sbjct: 90 LLDYIEGPVAFIFTNLDPFKLYKLLEESKASAPAKPGDIAPEDIVVPEGPTPFEPGPIVS 149
Query: 494 FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXV 661
Q +P +I G + I D ++K G+++ A +L I P G+ + +
Sbjct: 150 ELQQAGLPAQIQDGKVVITKDTVLVKEGEEIDEKTAEILKKLEIEPMEVGVDIVAI 205
Score = 53.2 bits (122), Expect = 5e-06
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Frame = +1
Query: 88 GREDK-ATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR-GSSIVLMGKNT 261
G E K A WK ++ +L+DEY +V + + + Q+Q+IR LR +I+ M +NT
Sbjct: 12 GYEPKVAEWKRREVKELKELMDEYENVGLVDLEGIPAPQLQEIRAKLRERDTIIRMSRNT 71
Query: 262 MMRKAIKDHLDNNPAL 309
+MR A+++ LD P L
Sbjct: 72 LMRIALEEKLDERPEL 87
>UniRef50_O94085 Cluster: Putative uncharacterized protein YLR339C;
n=5; Saccharomycetales|Rep: Putative uncharacterized
protein YLR339C - Saccharomyces cerevisiae (Baker's
yeast)
Length = 183
Score = 67.7 bits (158), Expect = 2e-10
Identities = 37/78 (47%), Positives = 42/78 (53%)
Frame = -3
Query: 540 IVPFEILVGIERAWKKEXFSGPRPVLWAGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSP 361
+VP ILVG +AWKKE G PVL A +GA AP AGA TL S
Sbjct: 1 MVPLAILVGTPKAWKKEVLPGSIPVLTALTQMSSGATAPALAGAATLLETITFLISVNGS 60
Query: 360 RVNTKPTLPLMCGNSFXE 307
V TKPTLPL GN+F +
Sbjct: 61 LVKTKPTLPLTKGNNFSK 78
Score = 34.7 bits (76), Expect = 2.0
Identities = 22/62 (35%), Positives = 29/62 (46%)
Frame = -1
Query: 308 RAGLLSRWSLMALRIIVFFPMSTILEPRSEXXXXXXXCEPTLSAPTMKHFGYSSKSWMIL 129
++G + LMAL +VF P+ T P + E TLS PT YSSK + L
Sbjct: 78 KSGKSDKKPLMALLTMVFLPIKTTALPLNSFLTSCICWEETLSTPTTNKDLYSSKYSLNL 137
Query: 128 TK 123
K
Sbjct: 138 AK 139
>UniRef50_Q2NEW2 Cluster: 50S ribosomal protein L10P; n=1;
Methanosphaera stadtmanae DSM 3091|Rep: 50S ribosomal
protein L10P - Methanosphaera stadtmanae (strain DSM
3091)
Length = 332
Score = 67.3 bits (157), Expect = 3e-10
Identities = 35/111 (31%), Positives = 60/111 (54%), Gaps = 1/111 (0%)
Frame = +2
Query: 317 LLPHIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-XS 493
L ++ G VFT+ + ++ L ++K +APA+ G+IAP +V+PA +T P
Sbjct: 74 LADYLEGQPAMVFTKMNPFKLFKILEDSKTEAPAKAGSIAPADIVVPAGDTSFPPGPILG 133
Query: 494 FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGL 646
Q + IP KI KG+I + +D I+ G+++ + A +L I P G+
Sbjct: 134 ELQQVGIPAKIDKGSIVVTDDAKIVDEGEEIPKAVADILTKLEIHPMEVGI 184
>UniRef50_Q8ZTT3 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Pyrobaculum|Rep: Acidic ribosomal protein P0 homolog -
Pyrobaculum aerophilum
Length = 345
Score = 65.7 bits (153), Expect = 1e-09
Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Frame = +2
Query: 329 IXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-XSFFQA 505
+ G VGF FT + EV + EN V+ A+PG AP +V+PA T P S F
Sbjct: 90 VRGEVGFFFTSFNPAEVIKIVAENSVRRAAQPGDKAPFDIVVPAGPTNASPGPIISKFGK 149
Query: 506 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISP 631
L IPT++ +G I I D + K G ++ A +L + I P
Sbjct: 150 LKIPTRVQEGKIWIAKDTVVAKAGQEITPEMAEVLRVVGIEP 191
>UniRef50_A7DRL3 Cluster: Ribosomal protein L10; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein L10
- Candidatus Nitrosopumilus maritimus SCM1
Length = 288
Score = 64.5 bits (150), Expect = 2e-09
Identities = 37/113 (32%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Frame = +2
Query: 317 LLPHIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-EKXS 493
++ G V +FT ++ L +NK+ AR G IA + VV+PA NTG+ P +
Sbjct: 78 MIGEFKGQVMIMFTNMSPFKLNVLLAKNKIMMMARGGDIASVDVVVPAKNTGIAPGPMLT 137
Query: 494 FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVV 652
F+ IPTKI +GTI I D + G+ + A +L +I P G+ +
Sbjct: 138 EFKEAGIPTKIDQGTIWIAKDSTPVLKGEAINEKLAAILGKLDIKPVEAGITL 190
>UniRef50_A3DNI2 Cluster: Ribosomal protein L10; n=1;
Staphylothermus marinus F1|Rep: Ribosomal protein L10 -
Staphylothermus marinus (strain ATCC 43588 / DSM 3639 /
F1)
Length = 338
Score = 63.3 bits (147), Expect = 5e-09
Identities = 39/114 (34%), Positives = 56/114 (49%), Gaps = 1/114 (0%)
Frame = +2
Query: 329 IXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKX-SFFQA 505
+ G +FT + E+ L + K + +PG IA +VIP NTGL P S F
Sbjct: 85 LTGQNLLLFTHMNAFELSLLLDKYKAKTYYKPGEIAQQEIVIPEGNTGLSPGPILSTFSK 144
Query: 506 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXVYD 667
L IPT+I +I I D + KPGD + A+LL +I+ + +K YD
Sbjct: 145 LKIPTRIQGNSIVITRDTVVAKPGDTISEELASLLQRLDIALKEVKINIKAAYD 198
>UniRef50_P15826 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Methanococcus|Rep: Acidic ribosomal protein P0 homolog -
Methanococcus vannielii
Length = 336
Score = 63.3 bits (147), Expect = 5e-09
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 1/119 (0%)
Frame = +2
Query: 314 KLLPHIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-X 490
KL+ ++ V T + ++ L E+K AP + GAIAP + + + +TG+ P
Sbjct: 83 KLVDYLDKGAAIVVTEMNPFKLFKTLEESKSPAPIKGGAIAPCDIEVKSGSTGMPPGPFL 142
Query: 491 SFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXVYD 667
S +A+ IP I KG I I D + K GD + A +L+ I P + GL V VY+
Sbjct: 143 SELKAVGIPAAIDKGKIGIKEDKVVAKEGDVISPKLAVVLSALGIKPVTVGLNVLGVYE 201
>UniRef50_P96039 Cluster: Acidic ribosomal protein P0 homolog; n=4;
Sulfolobaceae|Rep: Acidic ribosomal protein P0 homolog -
Sulfolobus solfataricus
Length = 338
Score = 61.7 bits (143), Expect = 2e-08
Identities = 41/120 (34%), Positives = 60/120 (50%), Gaps = 3/120 (2%)
Frame = +2
Query: 314 KLLPHIXGNVGFVFTRGDLVEVRDKLLEN-KVQAPARPGAIAPLSVVIPAHNTGL--GPE 484
KL ++ G F+FT+ D + + EN K++ A PG A VVIPA +TG+ GP
Sbjct: 81 KLEQYLTGPNVFIFTK-DNPFITNMFFENYKLRRYAMPGDKAEEEVVIPAGDTGMPAGPI 139
Query: 485 KXSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXVY 664
S F L + TK+ G + ++ D + KPGD + A +L I P L +K Y
Sbjct: 140 -LSVFGKLKVQTKVQDGKVHVVKDTVVAKPGDVIPAEALPILQKLGIMPVYVKLKIKVAY 198
>UniRef50_P13553 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Halobacteriaceae|Rep: Acidic ribosomal protein P0
homolog - Halobacterium salinarium (Halobacterium
halobium)
Length = 352
Score = 59.3 bits (137), Expect = 8e-08
Identities = 31/117 (26%), Positives = 59/117 (50%), Gaps = 1/117 (0%)
Frame = +2
Query: 317 LLPHIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-XS 493
L ++ G VG V T + + +L +K AP G +AP +V+P +TG+ P
Sbjct: 81 LTEYVEGEVGLVATNDNPFGLYQQLENSKTPAPINAGEVAPNDIVVPEGDTGIDPGPFVG 140
Query: 494 FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXVY 664
Q + +I +G+I++++D + + G+ V + +L+ I P GL ++ V+
Sbjct: 141 ELQTIGANARIQEGSIQVLDDSVVTEEGETVSDDVSNVLSELGIEPKEVGLDLRGVF 197
Score = 46.4 bits (105), Expect = 6e-04
Identities = 21/76 (27%), Positives = 40/76 (52%)
Frame = +1
Query: 94 EDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRK 273
E+ WK +++ LL+ Y +V + S+Q+Q +R L G + + M +NT++ +
Sbjct: 10 EEVPEWKRQEVAELVDLLETYDSVGVVNVTGIPSKQLQDMRRGLHGQAALRMSRNTLLVR 69
Query: 274 AIKDHLDNNPALXETV 321
A+++ D L E V
Sbjct: 70 ALEEAGDGLDTLTEYV 85
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 57.6 bits (133), Expect = 3e-07
Identities = 26/53 (49%), Positives = 38/53 (71%)
Frame = +2
Query: 317 LLPHIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 475
L+P + GNVG +FT+GDL EV +++ + KV APAR G +A + V++P NT L
Sbjct: 21 LVPLLVGNVGPIFTKGDLKEVDEEVAKYKVGAPARTGLVAHIDVIVPPGNTXL 73
>UniRef50_Q74N82 Cluster: NEQ091; n=1; Nanoarchaeum equitans|Rep:
NEQ091 - Nanoarchaeum equitans
Length = 284
Score = 57.6 bits (133), Expect = 3e-07
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Frame = +2
Query: 356 TRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL--GPEKXSFFQALSIPTKIS 529
T ++ ++ +E+KV P + G IAP +VIP T + GP + +AL + TK++
Sbjct: 86 TNENIFKIAKIFMEHKVNVPIKAGEIAPKDIVIPKGITNIPVGPIQTEL-RALGVKTKVT 144
Query: 530 KGTIEIINDVHILKPGDKVGASEATLLNMXNISP 631
G IEI+ D ++K G+ V A +L I P
Sbjct: 145 SGKIEIVEDAVVVKEGEIVSPKVANVLQTLGIKP 178
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 56.8 bits (131), Expect = 4e-07
Identities = 25/53 (47%), Positives = 37/53 (69%)
Frame = +2
Query: 317 LLPHIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 475
L+P + GNVG +FT+GDL E +++ + KV APA G +A + V++P NTGL
Sbjct: 62 LVPLLVGNVGPIFTKGDLKEADEEVAKYKVGAPAHTGLVAHIDVIVPPGNTGL 114
>UniRef50_A5C7V3 Cluster: Putative uncharacterized protein; n=2;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 742
Score = 56.4 bits (130), Expect = 6e-07
Identities = 25/53 (47%), Positives = 37/53 (69%)
Frame = +2
Query: 317 LLPHIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGL 475
L+P + GNVG + T+GDL EV ++ + KV APAR G ++ + V++P NTGL
Sbjct: 618 LVPLLVGNVGLISTKGDLKEVDKEVAKYKVGAPARAGLVSHIDVIVPPGNTGL 670
>UniRef50_A3CSJ7 Cluster: Ribosomal protein L10; n=4;
Methanomicrobiales|Rep: Ribosomal protein L10 -
Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498
/ JR1)
Length = 346
Score = 52.0 bits (119), Expect = 1e-05
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 1/114 (0%)
Frame = +2
Query: 326 HIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-XSFFQ 502
H G +FT + ++ L + K + A+PG AP +VIP T P Q
Sbjct: 80 HAEGQSALIFTNENPFKLFKLLEKTKTKMAAKPGETAPEDIVIPKGPTSFKPGPIVGELQ 139
Query: 503 ALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXVY 664
+ IP I G ++I ++K G+ + A L + P GL+++ Y
Sbjct: 140 QVGIPAAIEGGKVKIRETKTVVKKGEVINKKVAEALVKLGVKPMDVGLILQAAY 193
Score = 38.7 bits (86), Expect = 0.13
Identities = 18/59 (30%), Positives = 36/59 (61%)
Frame = +1
Query: 109 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAIKD 285
WK + +I + ++E+ +V + + Q+QQIR +LRG++ V M +NT++ A+ +
Sbjct: 11 WKKDEVEEIKRGIEEHTLVGVVDMYGIPASQVQQIRRNLRGTARVKMARNTLIEHALNE 69
>UniRef50_Q0W051 Cluster: 50S ribosomal protein L10E; n=1;
uncultured methanogenic archaeon RC-I|Rep: 50S ribosomal
protein L10E - Uncultured methanogenic archaeon RC-I
Length = 304
Score = 51.2 bits (117), Expect = 2e-05
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Frame = +2
Query: 302 QPSXKLLPHIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP 481
+ + +L ++ G + V+T + ++ L K + A+ G IAP +VIP T P
Sbjct: 79 EKAKELAKYVDGQMLIVYTNDNPFKLYKLLNATKSKRAAKGGDIAPSDIVIPKGPTSFKP 138
Query: 482 -EKXSFFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGL 646
FQ + IP I G + I + ++K G+K+ A A L I P GL
Sbjct: 139 GPLVGEFQQVGIPAGIEGGKVVIKDTKTVVKQGEKISAKLAEALTRLEIMPIDVGL 194
>UniRef50_Q2Y4X9 Cluster: Acidic ribosomal protein P0; n=1;
uncultured archaeon|Rep: Acidic ribosomal protein P0 -
uncultured archaeon
Length = 313
Score = 50.8 bits (116), Expect = 3e-05
Identities = 34/118 (28%), Positives = 54/118 (45%), Gaps = 1/118 (0%)
Frame = +2
Query: 317 LLPHIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-EKXS 493
++ I + +FT D + L + K+ AP + GA+AP+ +VI T L P
Sbjct: 75 MVDFIDDQMALIFTDLDAFALYKVLEKGKIPAPIKAGAVAPIDIVIEEGPTSLRPGPVVG 134
Query: 494 FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXVYD 667
Q L IP+ I G + + ++ G+ V A +L I P + GL + VYD
Sbjct: 135 ELQNLGIPSGIDGGKVVVKQRKVAVEEGEIVSPELADMLAKLEIYPITEGLDLCAVYD 192
Score = 38.3 bits (85), Expect = 0.17
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +1
Query: 109 WKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKA 276
WK I LL Y + +GS+Q+Q+IR RG +++ + KN+M+ ++
Sbjct: 11 WKEEQVASINSLLGSYDTIGLAKIRGLGSKQLQRIRKEFRGDALLKVSKNSMIARS 66
>UniRef50_Q8PY51 Cluster: Acidic ribosomal protein P0 homolog; n=6;
Archaea|Rep: Acidic ribosomal protein P0 homolog -
Methanosarcina mazei (Methanosarcina frisia)
Length = 347
Score = 50.0 bits (114), Expect = 5e-05
Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 1/115 (0%)
Frame = +2
Query: 326 HIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEK-XSFFQ 502
++ +FT ++ L + K +P + GAIAP +++ T P Q
Sbjct: 83 YLDNQTALIFTNESPFKLYKLLEQTKTPSPIKAGAIAPEDIIVQKGPTSFPPGPILGELQ 142
Query: 503 ALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXVYD 667
+ IP I G + + + K G+ V AT+L+ I P GL ++ YD
Sbjct: 143 SAGIPASIDAGKVAVKETKVVCKAGEAVPQKLATMLSKLEIYPLIVGLDLRAAYD 197
>UniRef50_A0B921 Cluster: Ribosomal protein L10; n=1; Methanosaeta
thermophila PT|Rep: Ribosomal protein L10 - Methanosaeta
thermophila (strain DSM 6194 / PT)
(Methanothrixthermophila (strain DSM 6194 / PT))
Length = 321
Score = 49.6 bits (113), Expect = 7e-05
Identities = 30/117 (25%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Frame = +2
Query: 317 LLPHIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGP-EKXS 493
L+ +I +F+ + ++ L K P + GA+AP+ +V+ + T P
Sbjct: 80 LVDYIEDQTALIFSDANPFALKKMLDAEKRPMPIKAGAVAPVDIVVESGETSFSPGPMVG 139
Query: 494 FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXVY 664
Q+ IP I G + I V + K GD + A +L + I P GL ++ Y
Sbjct: 140 KLQSAGIPAAIKGGKVVINQRVVLAKQGDVITPKVAEVLKLMEIYPKLVGLELRAAY 196
>UniRef50_Q7R447 Cluster: GLP_254_32992_33747; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_254_32992_33747 - Giardia lamblia
ATCC 50803
Length = 251
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/80 (27%), Positives = 44/80 (55%)
Frame = +1
Query: 40 LVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRI 219
L+ + RS L+++ ++ + K +I + D Y +++ + N+ S QQ+R
Sbjct: 10 LMPRSKRSKTVVLAKVEKKTREA-KQEIIKQIREAFDTYDTVYVIDSHNMTSSSWQQLRT 68
Query: 220 SLRGSSIVLMGKNTMMRKAI 279
S++G + + MGKN +MR A+
Sbjct: 69 SMKGYARIFMGKNQLMRYAL 88
Score = 38.3 bits (85), Expect = 0.17
Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Frame = +2
Query: 329 IXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKXSF---- 496
+ G G +FT +VR L AR G +A ++VIP L +K SF
Sbjct: 107 LKGMTGLLFTSAPEEKVRSALASVARPCLARGGDVATKTIVIP--QGPLDRDKYSFALEP 164
Query: 497 -FQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLL 610
+ L +PT + I ++ D + K GD + +++A LL
Sbjct: 165 ELRKLGLPTSLQNTVIHVLCDHVLCKEGDVLTSAQARLL 203
>UniRef50_Q19302 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 220
Score = 42.7 bits (96), Expect = 0.008
Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
Frame = +2
Query: 329 IXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP-AHNTGLGPEKXSFFQA 505
+ G G +FT EV + E + AR G +A +VV+P + +
Sbjct: 97 LKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLPEGPISQFAFSMEPQLRK 156
Query: 506 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVK 655
L +PTK+ KG I + + K G+ + +A +L + + L+ K
Sbjct: 157 LGLPTKLDKGVITLYQQFEVCKEGEPLTVEQAKILKHFEVKMSQFRLIFK 206
>UniRef50_A7PSP2 Cluster: Chromosome chr6 scaffold_28, whole genome
shotgun sequence; n=3; Vitis vinifera|Rep: Chromosome
chr6 scaffold_28, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 105
Score = 39.1 bits (87), Expect = 0.095
Identities = 24/50 (48%), Positives = 27/50 (54%)
Frame = -3
Query: 471 PVLWAGMTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLPLMCG 322
PVL G T A P RAGA TL+ + S TS +SP V PTLP G
Sbjct: 17 PVLPGGAMTSIWATNPVRAGAPTLYLATSSSTSFKSPFVKIGPTLPTRRG 66
>UniRef50_Q08XA8 Cluster: Secretion protein HlyD, putative; n=2;
Cystobacterineae|Rep: Secretion protein HlyD, putative -
Stigmatella aurantiaca DW4/3-1
Length = 395
Score = 37.1 bits (82), Expect = 0.38
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 1/98 (1%)
Frame = +2
Query: 296 TIQPSXKLLPHIXGNVGFVF-TRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTG 472
T+ PS +G V T+ VEV ++ K +A RPGA+ L A
Sbjct: 262 TLNPSGARFEAKVTTLGAVIDTQSRTVEVLADIIPGKAEATLRPGALVELDFAAAAAEGD 321
Query: 473 LGPEKXSFFQALSIPTKISKGTIEIINDVHILKPGDKV 586
G K F A ++ +K +G + ++ D +LK KV
Sbjct: 322 DG--KSLFLPAQAVSSKGQQGYVWVVQDGRVLKRDVKV 357
>UniRef50_A3Y9U7 Cluster: Putative uncharacterized protein; n=1;
Marinomonas sp. MED121|Rep: Putative uncharacterized
protein - Marinomonas sp. MED121
Length = 418
Score = 36.7 bits (81), Expect = 0.51
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Frame = +1
Query: 46 LKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRIS- 222
+K ++PYA L+ + DKA + + +++LL YP +V D + + I+
Sbjct: 295 IKQAKTPYAALAHQFKTDKAKYDDSSMGLLVKLLGIYPPGTVVQLDTGQFALVISVNINK 354
Query: 223 LRGSSIVLMGKNTMMRKAIKDHLDNNPALXETVATHQXQ 339
L ++++ + +A+ L+ NP L A H Q
Sbjct: 355 LLAPNVLIYDSSIPKEQAVILDLNENPELKIVKALHPAQ 393
>UniRef50_Q5BY73 Cluster: SJCHGC01801 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC01801 protein - Schistosoma
japonicum (Blood fluke)
Length = 236
Score = 36.3 bits (80), Expect = 0.67
Identities = 27/114 (23%), Positives = 49/114 (42%), Gaps = 3/114 (2%)
Frame = +2
Query: 317 LLPHIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKXS- 493
L ++ G +FT+ E+R++L + RPGA A +V I + P
Sbjct: 86 LCKYLKGQCALLFTKSSPSELREQLDAFRSAEYCRPGAPAEQTVRIASGPLPKFPHTMEP 145
Query: 494 FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNI--SPFSYGLV 649
+ L +P K+ +G + + D + D + + +L + I S F GL+
Sbjct: 146 VLRQLGMPVKLVRGVVHLERDYLVCNSEDVLSPEQCRILKLFQIEMSEFRVGLL 199
>UniRef50_Q7S302 Cluster: mRNA turnover protein 4 homolog; n=17;
Ascomycota|Rep: mRNA turnover protein 4 homolog -
Neurospora crassa
Length = 252
Score = 36.3 bits (80), Expect = 0.67
Identities = 25/91 (27%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +2
Query: 194 RNRCSRSVSRYVAPVSCSWEKTQ*CAKPSKTTWTTIQPSX--KLLPHIXGNVGFVFTRGD 367
RN + V + + + KT+ A+ TT Q KL ++ G+VG +FT D
Sbjct: 49 RNNYLKDVRKELNDCRIFFGKTKLTARALGTTPEDAQADGLDKLSKYLSGSVGLIFTNRD 108
Query: 368 LVEVRDKLLENKVQAPARPGAIAPLSVVIPA 460
E++D + AR G++A ++ IP+
Sbjct: 109 PSEIKDYFVNLTQVDFARAGSVATRTITIPS 139
>UniRef50_A0X4T2 Cluster: Putative outer membrane adhesin like
proteiin precursor; n=1; Shewanella pealeana ATCC
700345|Rep: Putative outer membrane adhesin like proteiin
precursor - Shewanella pealeana ATCC 700345
Length = 3840
Score = 34.7 bits (76), Expect = 2.0
Identities = 36/161 (22%), Positives = 61/161 (37%), Gaps = 4/161 (2%)
Frame = -3
Query: 588 PTLSPGFKMCTSLMISIVPFEILVGIERAWKKEXFSGPRPVLWAGMTTDNGAMAPGRAGA 409
P +S +C L ++ V I A + F P PV + DN PG++ A
Sbjct: 3116 PVISVPADLCGDLTVNANALYTRVDIGAATAIDSFGNPLPV---SIINDNLLFPPGQSQA 3172
Query: 408 WTLFSNSLSRTSTRSPRVNTKPTLPLMCGNSFXEG-WIVVQVVFDGFAHHCVFSHEHDTG 232
+ ++S R S + + +P + + EG + V V +G + S +
Sbjct: 3173 YWQATDSEGRVSIAAQNICVRPLVSFQKDQTVLEGEEVTVSVHLNGRSEIYPLSIPYQLS 3232
Query: 231 XXXXXXXXXXXXXXHVI--GTHDE-TFWVLVQELDDLNEVV 118
VI GTH E +L+ EL + +E +
Sbjct: 3233 GSASSGDYHVVTSELVIESGTHTEIRIDILMDELVEADETI 3273
>UniRef50_Q58J68 Cluster: Mitochondrial SBP40; n=1; Solanum
tuberosum|Rep: Mitochondrial SBP40 - Solanum tuberosum
(Potato)
Length = 387
Score = 34.7 bits (76), Expect = 2.0
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Frame = +1
Query: 139 QLLDEYPKCFIVGADNVGSQQMQQIRISLRGS--SIVLMGKNTMMRKAIKDHLD 294
+ +DEY CF + A+NV Q + +SL+G+ S+ GKN ++ + H D
Sbjct: 166 EFMDEYQSCFHIVAENVNFVQGLKRNVSLKGNVKSVYPKGKNFVLDENDNQHSD 219
>UniRef50_Q5KM60 Cluster: Ribosomal protein, putative; n=1;
Filobasidiella neoformans|Rep: Ribosomal protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 245
Score = 34.7 bits (76), Expect = 2.0
Identities = 19/77 (24%), Positives = 36/77 (46%)
Frame = +1
Query: 49 KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR 228
K RS TLS+ K +I + +D+Y C++ ++ + ++++R R
Sbjct: 3 KSKRSKLTTLSKTPVRSTKASKQALVNEIRENVDKYDYCWMFSVGDMRNDGLKEVRAQWR 62
Query: 229 GSSIVLMGKNTMMRKAI 279
G+ GK +M KA+
Sbjct: 63 GTGRFFFGKGKVMAKAL 79
>UniRef50_O28781 Cluster: Acidic ribosomal protein P0 homolog; n=1;
Archaeoglobus fulgidus|Rep: Acidic ribosomal protein P0
homolog - Archaeoglobus fulgidus
Length = 339
Score = 34.7 bits (76), Expect = 2.0
Identities = 17/50 (34%), Positives = 30/50 (60%)
Frame = +1
Query: 130 KIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMRKAI 279
+I +++ P IV NV + QMQ+IR RG + + + KNT++ +A+
Sbjct: 18 EIKRMISSKPVVAIVSFRNVPAGQMQKIRREFRGKAEIKVVKNTLLERAL 67
>UniRef50_P14222 Cluster: Perforin-1 precursor; n=23; Mammalia|Rep:
Perforin-1 precursor - Homo sapiens (Human)
Length = 555
Score = 33.9 bits (74), Expect = 3.6
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 3/50 (6%)
Frame = +3
Query: 234 QYRAHGKKHNDAQSHQRPPGQQSSPRRNC---CHTSXATLASCSPAETSL 374
QY + D S PPG+Q SPR C CH S T C P + L
Sbjct: 366 QYLTDRARWRDC-SRPCPPGRQKSPRDPCQCVCHGSAVTTQDCCPRQRGL 414
>UniRef50_UPI0000428949 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 123
Score = 33.1 bits (72), Expect = 6.2
Identities = 18/61 (29%), Positives = 22/61 (36%), Gaps = 2/61 (3%)
Frame = +3
Query: 285 PPGQQSSPRRNCC--HTSXATLASCSPAETSLRSVTNCWRTKSKLQLVLVPLPHCQSSFP 458
PP QQ +P + CC A C P C + + V P P CQ P
Sbjct: 53 PPPQQCAPPQQCCPPPQQCAPPQQCCPPPQQCAPPQQCCPPPQQTKQVCQPPPKCQQKCP 112
Query: 459 P 461
P
Sbjct: 113 P 113
>UniRef50_Q7K1Q7 Cluster: LD47064p; n=7; Endopterygota|Rep: LD47064p
- Drosophila melanogaster (Fruit fly)
Length = 256
Score = 33.1 bits (72), Expect = 6.2
Identities = 18/71 (25%), Positives = 35/71 (49%)
Frame = +1
Query: 58 RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 237
R +L++ R+ A WK I + +YP F+ N+ + ++ +R L+ +S
Sbjct: 6 RDKKVSLTKTDRKGLA-WKQRIVDDIRFCVGKYPNIFVFQVQNMRNSLLKDLRQELKKNS 64
Query: 238 IVLMGKNTMMR 270
+ GKN +M+
Sbjct: 65 RFIFGKNRVMQ 75
>UniRef50_A4S8Z4 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 255
Score = 32.7 bits (71), Expect = 8.2
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 6/102 (5%)
Frame = +2
Query: 329 IXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVI---PAHNTGLGPEKXSFF 499
+ G+ G +FT +V V+ AR GA+A +V + P H + +
Sbjct: 97 VKGDCGVMFTNLSREDVESVFERFAVKDYARTGALARETVTVEAGPVHGPSGALMEHTLE 156
Query: 500 QAL---SIPTKISKGTIEIINDVHILKPGDKVGASEATLLNM 616
L +PTK+++G IE+ + + K G + A LL +
Sbjct: 157 PTLRKNGMPTKLNRGVIELEANHTLCKEGQHISPQGAILLRL 198
>UniRef50_A4HBP4 Cluster: Putative uncharacterized protein; n=1;
Leishmania braziliensis|Rep: Putative uncharacterized
protein - Leishmania braziliensis
Length = 934
Score = 32.7 bits (71), Expect = 8.2
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +3
Query: 216 YLATWLQYRAHGKKHNDAQSHQRPPGQQSSP 308
+ TWLQ+ HN Q HQ+PP + P
Sbjct: 149 HAVTWLQWEEIKALHNSEQPHQKPPARSMRP 179
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 715,671,463
Number of Sequences: 1657284
Number of extensions: 14755179
Number of successful extensions: 41763
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 40129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41739
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -