Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_B01
(668 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160... 150 1e-36
11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164... 150 1e-36
08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171... 150 1e-36
12_01_0032 - 266954-267079,267204-267245,267290-267366,267450-26... 33 0.21
11_01_0033 - 251730-251855,252068-252144,252228-252318,252644-25... 33 0.21
06_01_0080 + 644021-645463 30 1.9
01_06_1468 + 37574124-37574180,37574275-37574346,37574437-375745... 29 2.5
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 29 3.3
10_01_0266 + 2816391-2818898,2818934-2819162,2819369-2819444,281... 29 4.4
11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577,551... 28 5.9
10_08_0406 - 17688069-17690643,17691065-17691132 28 7.7
03_04_0243 + 19298293-19299117 28 7.7
01_01_1234 - 10007446-10007940,10008030-10008125,10008980-100092... 28 7.7
>12_01_0211 -
1601129-1601272,1601670-1602062,1602142-1602240,
1602920-1602988,1603071-1603328
Length = 320
Score = 150 bits (363), Expect = 1e-36
Identities = 69/118 (58%), Positives = 90/118 (76%)
Frame = +2
Query: 314 KLLPHIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKXS 493
+L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP+ VV+P NTGL P + S
Sbjct: 80 ELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTS 139
Query: 494 FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXVYD 667
FFQ L+IPTKI+KGT+EII V ++K GDKVG+SE+ LL I PFSYGLV+ VYD
Sbjct: 140 FFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYD 197
Score = 81.8 bits (193), Expect = 4e-16
Identities = 41/69 (59%), Positives = 48/69 (69%)
Frame = +1
Query: 91 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 270
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 271 KAIKDHLDN 297
+ IK H DN
Sbjct: 64 RCIKVHADN 72
>11_01_0210 -
1647922-1648065,1648459-1648851,1648930-1649028,
1649706-1649774,1649877-1650134
Length = 320
Score = 150 bits (363), Expect = 1e-36
Identities = 69/118 (58%), Positives = 90/118 (76%)
Frame = +2
Query: 314 KLLPHIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKXS 493
+L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP+ VV+P NTGL P + S
Sbjct: 80 ELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTS 139
Query: 494 FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXVYD 667
FFQ L+IPTKI+KGT+EII V ++K GDKVG+SE+ LL I PFSYGLV+ VYD
Sbjct: 140 FFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYD 197
Score = 81.8 bits (193), Expect = 4e-16
Identities = 41/69 (59%), Positives = 48/69 (69%)
Frame = +1
Query: 91 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 270
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 271 KAIKDHLDN 297
+ IK H DN
Sbjct: 64 RCIKVHADN 72
>08_01_0215 -
1714224-1714364,1714795-1715187,1715279-1715377,
1716248-1716316,1716408-1716665
Length = 319
Score = 150 bits (363), Expect = 1e-36
Identities = 69/118 (58%), Positives = 90/118 (76%)
Frame = +2
Query: 314 KLLPHIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKXS 493
+L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP+ VV+P NTGL P + S
Sbjct: 80 ELMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTS 139
Query: 494 FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXVYD 667
FFQ L+IPTKI+KGT+EII V ++K GDKVG+SE+ LL I PFSYGLV+ VYD
Sbjct: 140 FFQVLNIPTKINKGTVEIITPVELIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYD 197
Score = 81.8 bits (193), Expect = 4e-16
Identities = 41/69 (59%), Positives = 48/69 (69%)
Frame = +1
Query: 91 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 270
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 271 KAIKDHLDN 297
+ IK H DN
Sbjct: 64 RCIKVHADN 72
>12_01_0032 -
266954-267079,267204-267245,267290-267366,267450-267540,
267864-267924,268021-268079,268176-268266,268481-268698,
268818-268824,269013-269148,270064-270307
Length = 383
Score = 33.1 bits (72), Expect = 0.21
Identities = 21/97 (21%), Positives = 44/97 (45%)
Frame = +1
Query: 61 SPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSI 240
S TLS+ ++ K I ++ Y ++ DN+ +Q+++ +R L+ SS
Sbjct: 143 SSAVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLKSSSR 202
Query: 241 VLMGKNTMMRKAIKDHLDNNPALXETVATHQXQRWLR 351
+ + +M+ A L +PA H+ ++L+
Sbjct: 203 IFLAGKKVMQIA----LGRSPADEAKTGLHKLSKFLQ 235
>11_01_0033 -
251730-251855,252068-252144,252228-252318,252644-252704,
252800-252858,252955-253045,253238-253406,253760-253787
Length = 233
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 49 KFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLR 228
K R+ TLS+ ++ K I ++ Y ++ DN+ +Q+++ +R L+
Sbjct: 3 KSKRNRPVTLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLK 62
Query: 229 GSS-IVLMGKNTM 264
SS I L GK M
Sbjct: 63 SSSRIFLAGKKVM 75
>06_01_0080 + 644021-645463
Length = 480
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -2
Query: 556 IVDDFNSTL*NLGRDRKSLEERXLLWTEAGVVGGND 449
I+D N N R K++EER LL+ GV GG +
Sbjct: 100 IIDGGNEWYENTERREKAMEERGLLYLGMGVSGGEE 135
>01_06_1468 +
37574124-37574180,37574275-37574346,37574437-37574513,
37574897-37574978,37576005-37576069,37576313-37576354,
37576452-37576503,37576631-37576679,37576784-37576797,
37576942-37577049,37577129-37577272,37577421-37577810
Length = 383
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +3
Query: 228 WLQYRAHGKKHNDAQSHQRPPGQQSSPRRNCCH 326
+LQY +H + D SH R P Q P N H
Sbjct: 74 YLQYSSHQELTTDQSSHGRNPDQAFKPSYNISH 106
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +2
Query: 341 VGFVFTRGDLVEV--RDKLLENKVQAPARPGAIAPLSVVIPA 460
VG + T GDL + + L+++KV P PGA+ +S + PA
Sbjct: 148 VGDIITGGDLYAIVNENTLMQHKVALP--PGAMGKISYIAPA 187
>10_01_0266 +
2816391-2818898,2818934-2819162,2819369-2819444,
2819776-2819830,2822042-2822110,2823077-2823321,
2824029-2824065
Length = 1072
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 16 PHGSRAF---CLVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPK 162
PH S A CL L+F T R R K T K + II++L+ YP+
Sbjct: 802 PHASSADIDKCLFLEFLMLMTCTTIRNSRSFKFTHKKFGYWMIIEMLNSYPR 853
>11_01_0676 -
5511755-5511831,5512857-5513052,5513462-5513577,
5513752-5514597,5515515-5515766,5522344-5525206
Length = 1449
Score = 28.3 bits (60), Expect = 5.9
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Frame = +2
Query: 317 LLPH--IXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSV----VIPAHN--TG 472
+LPH + GN+GF+ + + ++ D +L++ A P + LS I HN G
Sbjct: 406 VLPHNNLEGNMGFLSSLSECRQLEDLILDHNSFVGALPDHLGNLSARLISFIADHNKLAG 465
Query: 473 LGPEKXSFFQALSI 514
PEK S +L +
Sbjct: 466 SLPEKMSNLSSLEL 479
>10_08_0406 - 17688069-17690643,17691065-17691132
Length = 880
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 1/52 (1%)
Frame = +3
Query: 132 DHPTLGRVPKMFHRGCR*RGLATDAA-DPYLATWLQYRAHGKKHNDAQSHQR 284
D P R ++FHR R RG A D A D W+ + ND Q H +
Sbjct: 789 DDPAARRGARLFHR-LRRRGPAFDKAWDELARFWVHLVVYLAPSNDVQGHAK 839
>03_04_0243 + 19298293-19299117
Length = 274
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = -3
Query: 453 MTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLP 334
+ TD+ + APG A A + S SRTS +P ++ PT P
Sbjct: 172 VVTDSLSRAPGAAWAAAMAPTSWSRTS--APPASSSPTSP 209
>01_01_1234 -
10007446-10007940,10008030-10008125,10008980-10009253,
10009381-10009682,10010078-10010123,10010319-10010368,
10011124-10011268,10012051-10012229,10012327-10012485,
10012636-10012887,10012972-10013097,10013197-10013525,
10014183-10014252
Length = 840
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 261 NDAQSHQRPPGQQSSPRRNCCHTSXATLASCSPAETSLRS 380
+D++ H++ P Q+++ RR T + L CS A + S
Sbjct: 101 SDSEKHKKNPAQRAASRRAPIQTLTSILTKCSRASDGVIS 140
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,780,875
Number of Sequences: 37544
Number of extensions: 427544
Number of successful extensions: 1131
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1130
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -