Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_B01
         (668 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical pr...   180   1e-45
U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical pr...    43   2e-04
U53154-2|AAC25856.1|  358|Caenorhabditis elegans Hypothetical pr...    28   5.2  
AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical ...    28   5.2  
AC024849-3|AAK68547.1|  327|Caenorhabditis elegans Hypothetical ...    28   6.9  

>Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical
           protein F25H2.10 protein.
          Length = 312

 Score =  180 bits (437), Expect = 1e-45
 Identities = 83/118 (70%), Positives = 98/118 (83%)
 Frame = +2

Query: 314 KLLPHIXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKXS 493
           KLLPHI  NVGFVFT+ DL E+R KLLEN+  APA+ GAIAP  V +P  NTG+GPEK S
Sbjct: 77  KLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAKAGAIAPCDVKLPPQNTGMGPEKTS 136

Query: 494 FFQALSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVKXVYD 667
           FFQAL IPTKI++GTIEI+NDVH++K GDKVGASE+ LLNM  ++PFSYGLVV+ VYD
Sbjct: 137 FFQALQIPTKIARGTIEILNDVHLIKEGDKVGASESALLNMLGVTPFSYGLVVRQVYD 194



 Score =  113 bits (272), Expect = 1e-25
 Identities = 46/75 (61%), Positives = 64/75 (85%)
 Frame = +1

Query: 85  MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTM 264
           M RED++TWK+NYF K+++L +EYPKC +VG DNVGS+QMQ+IR ++RG + +LMGKNTM
Sbjct: 1   MVREDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTM 60

Query: 265 MRKAIKDHLDNNPAL 309
           +RKA++ HL  NP+L
Sbjct: 61  IRKALRGHLGKNPSL 75


>U41264-4|AAA82424.1|  220|Caenorhabditis elegans Hypothetical
           protein F10E7.5 protein.
          Length = 220

 Score = 42.7 bits (96), Expect = 2e-04
 Identities = 27/110 (24%), Positives = 47/110 (42%), Gaps = 1/110 (0%)
 Frame = +2

Query: 329 IXGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP-AHNTGLGPEKXSFFQA 505
           + G  G +FT     EV  +  E   +  AR G +A  +VV+P    +          + 
Sbjct: 97  LKGQCGLMFTNMSKKEVEAEFSEASEEDYARVGDVATETVVLPEGPISQFAFSMEPQLRK 156

Query: 506 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMXNISPFSYGLVVK 655
           L +PTK+ KG I +     + K G+ +   +A +L    +    + L+ K
Sbjct: 157 LGLPTKLDKGVITLYQQFEVCKEGEPLTVEQAKILKHFEVKMSQFRLIFK 206



 Score = 29.5 bits (63), Expect = 2.3
 Identities = 19/74 (25%), Positives = 37/74 (50%)
 Frame = +1

Query: 58  RSPYATLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS 237
           R    +L+++ ++ K T K+N   ++   +D+Y   FI    N+ S +   IR   + +S
Sbjct: 6   RDKNVSLTKVKKKTKDT-KNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKYKENS 64

Query: 238 IVLMGKNTMMRKAI 279
               GKN ++  A+
Sbjct: 65  RFFFGKNNVISIAL 78


>U53154-2|AAC25856.1|  358|Caenorhabditis elegans Hypothetical
           protein C33G8.12 protein.
          Length = 358

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 15/38 (39%), Positives = 25/38 (65%)
 Frame = +1

Query: 40  LVLKFHRSPYATLSRMGREDKATWKSNYFVKIIQLLDE 153
           L+ K   S ++ +SR+ +EDK +  SN+++K  QLL E
Sbjct: 156 LLWKLGESIFSDVSRLSKEDKNSMISNFYIK-WQLLME 192


>AC006770-2|AAF60593.1| 1145|Caenorhabditis elegans Hypothetical
           protein Y46B2A.3 protein.
          Length = 1145

 Score = 28.3 bits (60), Expect = 5.2
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = -3

Query: 450 TTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPT 340
           TT      P  AG WT+ +N ++R  TR P    +PT
Sbjct: 192 TTRGFTQRPTAAG-WTIRANGITRGQTRVPGTTREPT 227


>AC024849-3|AAK68547.1|  327|Caenorhabditis elegans Hypothetical
           protein Y67D8B.2 protein.
          Length = 327

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = +2

Query: 389 LLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKXSFFQALSIPTKISKGT 538
           +L   +Q  A   A+  L+  +P   TGL P +   FQAL  P  I+  T
Sbjct: 42  VLNRYMQLEAYCDAVDDLTGALP--KTGLAPNEPDLFQALFFPRSIAPRT 89


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,011,504
Number of Sequences: 27780
Number of extensions: 330754
Number of successful extensions: 907
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 835
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)