Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_B01
         (668 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    25   0.86 
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                22   6.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    21   8.0  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   8.0  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   8.0  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 24.6 bits (51), Expect = 0.86
 Identities = 11/41 (26%), Positives = 18/41 (43%)
 Frame = -3

Query: 564 MCTSLMISIVPFEILVGIERAWKKEXFSGPRPVLWAGMTTD 442
           +C   ++ +  +  L      WK     GP+PV + G T D
Sbjct: 8   LCGIAVLFLALYYYLTSTFDFWKSRGVVGPKPVPFFGTTKD 48


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +1

Query: 493 FLPGSFYPYQDFKGYY*NHQ 552
           FLP S++P+Q     Y  H+
Sbjct: 311 FLPPSYHPHQHHPSQYHPHR 330


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -2

Query: 577 TGLQDVYIVDDFN 539
           TG+ D+++ DD N
Sbjct: 114 TGISDLFVFDDLN 126


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = +1

Query: 109 WKSNYFVKIIQLLDEYP 159
           W+   F  ++++LDE+P
Sbjct: 862 WRHWKFPNLVEVLDEFP 878


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = -1

Query: 422 DELELGLCSPTVCHGPQR 369
           D +E G+  PT C G  +
Sbjct: 361 DAVEYGIIGPTTCMGDHK 378


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,387
Number of Sequences: 438
Number of extensions: 4251
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)