Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_A24
         (654 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.41 
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.2  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    23   2.9  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   3.8  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    21   6.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.9  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.9  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   8.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.4 bits (53), Expect = 0.41
 Identities = 15/41 (36%), Positives = 19/41 (46%)
 Frame = +1

Query: 139 IFFYLNLCFNNCQVC*AVLYLFKCTFMGTYYFSLNCTHYIY 261
           I F ++L F  C     V  LF C F+      L CT+Y Y
Sbjct: 64  ITFNVHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYFY 104


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 91   RQKTVAVFFQFNSVNIIFFYLNLCFNNCQV 180
            R K+V  FF FN++ ++  +L L  N  Q+
Sbjct: 1265 RNKSVFAFFMFNALFVLVVFL-LQLNKDQI 1293



 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +2

Query: 50   YCLIKCIIYVIYVPDRKQLLFFSNL 124
            +C++  IIY++ +P    LL   ++
Sbjct: 1027 WCIVPGIIYLLSIPSMYLLLILYSI 1051


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 11/30 (36%), Positives = 18/30 (60%)
 Frame = +1

Query: 91   RQKTVAVFFQFNSVNIIFFYLNLCFNNCQV 180
            R K+V  FF FN++ ++  +L L  N  Q+
Sbjct: 1265 RNKSVFAFFMFNALFVLVVFL-LQLNKDQI 1293



 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +2

Query: 50   YCLIKCIIYVIYVPDRKQLLFFSNL 124
            +C++  IIY++ +P    LL   ++
Sbjct: 1027 WCIVPGIIYLLSIPSMYLLLILYSI 1051


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +2

Query: 50  YCLIKCIIYVI 82
           YC I C+IY+I
Sbjct: 218 YCYINCLIYLI 228


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/36 (30%), Positives = 19/36 (52%)
 Frame = +3

Query: 297 QGCRHFTKDRKIYSICSKTLKNSTVFRNLIKSQQPK 404
           +G +  +K ++IY I +    N    R   KS++PK
Sbjct: 22  RGRKKLSKHQQIYGIWADDSDNDEEERPSFKSRKPK 57


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +2

Query: 338 NLLKDAEEQYSFSKSNKV 391
           NLLKD E +   + +NKV
Sbjct: 291 NLLKDTEAEVRAAAANKV 308


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +2

Query: 50   YCLIKCIIYVIYVPDRKQLLFFSNL 124
            +C++  IIY++ +P    LL   ++
Sbjct: 1027 WCIVPGIIYLLSIPSMYLLLILYSI 1051


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +2

Query: 50   YCLIKCIIYVIYVPDRKQLLFFSNL 124
            +C++  IIY++ +P    LL   ++
Sbjct: 1027 WCIVPGIIYLLSIPSMYLLLILYSI 1051


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +3

Query: 519 KLKLYQIM*KILRNGNIIHS 578
           +LK+  I+  ++  GNIIH+
Sbjct: 13  RLKIITIVILVVATGNIIHT 32


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,757
Number of Sequences: 336
Number of extensions: 3180
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)