Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_A24
         (654 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_01_1106 - 10187609-10190041,10190292-10191932                       29   2.4  
06_01_0983 - 7630651-7630683,7630717-7630942,7630993-7631234,763...    29   4.3  
04_03_0785 + 19619062-19619532,19620047-19621012                       29   4.3  
09_01_0029 - 490433-490591,490930-491019,491860-492608,492996-49...    28   7.5  
04_04_1098 + 30876785-30876835,30876846-30877171,30877396-308774...    28   7.5  
04_01_0546 + 7091058-7091508,7092221-7092542,7092783-7092822           27   9.9  
02_01_0385 + 2783387-2783695,2784149-2785082,2785206-2785309,278...    27   9.9  

>07_01_1106 - 10187609-10190041,10190292-10191932
          Length = 1357

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 8/30 (26%), Positives = 19/30 (63%)
 Frame = +2

Query: 500 NIRECLETKAVPDHVKNPEKWKYYSLSGCY 589
           N+ +C+    +P + ++ +K +Y + +GCY
Sbjct: 460 NLSDCIRLMGIPQNFEDLQKLEYLNFAGCY 489


>06_01_0983 -
           7630651-7630683,7630717-7630942,7630993-7631234,
           7631502-7631591,7631680-7631845,7632225-7633191,
           7633402-7633591,7633908-7634048,7634416-7634736
          Length = 791

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +2

Query: 389 VTTTQDYGTIDRKSYRKLKHEMKQFRGKQSIFKRPEANI 505
           + T +DYG+   + Y K++ E  +    +S  K P A +
Sbjct: 432 IITNEDYGSFTTEDYEKVRREADEAIASKSATKSPVAEV 470


>04_03_0785 + 19619062-19619532,19620047-19621012
          Length = 478

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 11/20 (55%), Positives = 15/20 (75%)
 Frame = +2

Query: 518 ETKAVPDHVKNPEKWKYYSL 577
           E+  VPD+VKNP K+  Y+L
Sbjct: 345 ESPGVPDYVKNPAKYTRYTL 364


>09_01_0029 -
           490433-490591,490930-491019,491860-492608,492996-493047,
           493175-493276,493363-493494,493882-494109,494172-494321
          Length = 553

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = +2

Query: 386 KVTTTQDYGTIDRKSYRKLKHEMKQFRGKQSIFKRPEANI 505
           ++ T +DYG+   + Y K+  E  +    +S  K P A +
Sbjct: 421 RIITNEDYGSFTTEDYEKVGREADEAIASKSATKSPVAEV 460


>04_04_1098 +
           30876785-30876835,30876846-30877171,30877396-30877418,
           30877687-30879392
          Length = 701

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 20/87 (22%), Positives = 40/87 (45%)
 Frame = +2

Query: 299 RMSSFHERQKNLFNLLKDAEEQYSFSKSNKVTTTQDYGTIDRKSYRKLKHEMKQFRGKQS 478
           R S   ++++++ +  + +E     S S+  +        DRKS R+LKH+  + + +  
Sbjct: 580 RASLAAQKKRSVTSSSESSESSDYSSSSDSESDVSSDSREDRKSARQLKHDELERKKRSQ 639

Query: 479 IFKRPEANIRECLETKAVPDHVKNPEK 559
             KR E   ++  E +   D  K  E+
Sbjct: 640 DEKRKELEKQKQEEERKELDRQKQREE 666


>04_01_0546 + 7091058-7091508,7092221-7092542,7092783-7092822
          Length = 270

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
 Frame = +2

Query: 464 RGKQSIFKRPEAN--IRECLETKAVPDHVKNPEKW 562
           R K+ + ++ E    IRE LE++   D++KN  +W
Sbjct: 200 RDKEGMVRKEEVERCIREVLESERKADYMKNANRW 234


>02_01_0385 +
           2783387-2783695,2784149-2785082,2785206-2785309,
           2785402-2785486,2785517-2787578,2787732-2787753,
           2788157-2788327,2791473-2791517,2792558-2793874,
           2793962-2794012,2794090-2794188,2794352-2794504,
           2794554-2794571
          Length = 1789

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 26/105 (24%), Positives = 38/105 (36%), Gaps = 1/105 (0%)
 Frame = +2

Query: 278 Y*DQKLTRMSSFHERQKNLFNLLK-DAEEQYSFSKSNKVTTTQDYGTIDRKSYRKLKHEM 454
           Y D    R+SSF +   +L NL        Y  +    +   Q     D      L    
Sbjct: 560 YLDASSLRISSFSKSFNHLLNLQALILSNTYLKTLPTNIGCLQKLQYFDLSGCANLNELP 619

Query: 455 KQFRGKQSIFKRPEANIRECLETKAVPDHVKNPEKWKYYSLSGCY 589
             F    S+      N+  C E +A+P    N  + ++ SLS CY
Sbjct: 620 TSFGDLSSLLF---LNLASCHELEALPMSFGNLNRLQFLSLSDCY 661


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,802,923
Number of Sequences: 37544
Number of extensions: 235015
Number of successful extensions: 465
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 465
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)