Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_A20
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   1.6  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   2.2  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   2.2  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    23   2.2  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    22   3.8  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   5.0  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   6.7  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   6.7  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   8.8  

>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +2

Query: 221 PENAAYYGNRSACYMMLCMYKKAL 292
           P N  YY + + CY  L M  K L
Sbjct: 34  PTNQKYYPSLAKCYACLLMVVKIL 57


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 41 VDEDEMAESEVLDLDLNIE 97
          + +DEM + E+ D DLN E
Sbjct: 1  MSDDEMEKFEITDYDLNNE 19


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -2

Query: 447 SPLTHSTPPNSVARRTACSPFNRSPNAIQHFAARMYPLVN 328
           S  T +    S +  +  SP + S +A    AARMYP V+
Sbjct: 26  SATTEAPAAYSSSSPSGSSPQHSSSSASTSPAARMYPYVS 65


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -2

Query: 447 SPLTHSTPPNSVARRTACSPFNRSPNAIQHFAARMYPLVN 328
           S  T +    S +  +  SP + S +A    AARMYP V+
Sbjct: 26  SATTEAPAAYSSSSPSGSSPQHSSSSASTSPAARMYPYVS 65


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = -2

Query: 447 SPLTHSTPPNSVARRTACS 391
           SPL HS  P + +R T  S
Sbjct: 115 SPLFHSAAPRTASRETKSS 133


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 158 NNYHCLFFLQPGSPGFWV 105
           NN + +  L+  +PGFW+
Sbjct: 651 NNGYVVLRLRANNPGFWL 668


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 6/18 (33%), Positives = 12/18 (66%)
 Frame = -3

Query: 158 NNYHCLFFLQPGSPGFWV 105
           NN + +F  +  +PG+W+
Sbjct: 651 NNGYVIFRFRADNPGYWL 668


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +2

Query: 11  FILFHIKIGTVDEDEMAESEVLDLDLNIED 100
           F+ +HIKI    EDE A  + + L + + +
Sbjct: 169 FLWYHIKIDR--EDEEARDDFIKLGIKLSN 196


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = -3

Query: 161 INNYHCLFFLQPG 123
           +  Y C+F L+PG
Sbjct: 277 LQEYRCIFSLRPG 289


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,202
Number of Sequences: 336
Number of extensions: 3162
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)