Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_A19
         (655 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0257 + 16170914-16171113,16171362-16171554,16171929-161720...    31   0.80 
02_05_0373 + 28374298-28374380,28375126-28375303,28375975-283760...    31   1.1  
01_07_0111 - 41137822-41138973,41139453-41139540,41139850-411399...    31   1.1  
02_05_0287 - 27525722-27525812,27525927-27526057,27526945-275270...    30   1.9  
08_02_0179 - 13904027-13904125,13904177-13904259,13906019-139060...    29   4.3  
04_01_0261 + 3516461-3516629,3517729-3517823,3518724-3518834,351...    28   5.6  
07_03_0557 + 19447367-19447517,19447630-19447730,19448359-194484...    28   7.5  
02_04_0558 + 23866513-23866845                                         27   9.9  
01_06_1763 + 39723596-39723691,39724030-39724672,39724773-397252...    27   9.9  

>09_04_0257 +
           16170914-16171113,16171362-16171554,16171929-16172034,
           16172293-16172415,16172739-16172830,16173276-16173376,
           16173458-16173524,16174016-16174108,16174247-16174375
          Length = 367

 Score = 31.1 bits (67), Expect = 0.80
 Identities = 13/36 (36%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
 Frame = -1

Query: 229 LNYFIYFLFHFFQPLKVY--IRSNIIMVYELLNSTY 128
           LN+F +FLFH    LK+Y  +   I+ +Y+ L+  +
Sbjct: 53  LNFFFFFLFHLSNSLKLYNLLSLKILPIYQKLSGNH 88


>02_05_0373 +
           28374298-28374380,28375126-28375303,28375975-28376065,
           28376162-28376256,28376379-28376468,28376789-28376837,
           28376941-28377079,28377224-28377340,28377437-28377527,
           28377604-28377746,28378009-28378123,28378439-28378483,
           28378565-28378645
          Length = 438

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 21/79 (26%), Positives = 35/79 (44%)
 Frame = -1

Query: 343 VNHCSIQMFIVKRIHIILGVIKNNVIADVFVFTANISQLNYFIYFLFHFFQPLKVYIRSN 164
           +  CS     +  ++I++ V  N  +A  F F      L +  YF   F +     IR+N
Sbjct: 53  IGGCSFLYMRISNVYIVIVVSSNANVACAFKFVVEAVAL-FKSYFGGAFDEDA---IRNN 108

Query: 163 IIMVYELLNSTYLNSYENN 107
            +++YELL+      Y  N
Sbjct: 109 FVLIYELLDEIMDFGYPQN 127


>01_07_0111 -
           41137822-41138973,41139453-41139540,41139850-41139969,
           41140165-41140211,41140796-41141029,41141305-41141505,
           41141506-41143407,41144140-41145303,41145574-41145879
          Length = 1737

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 21/61 (34%), Positives = 30/61 (49%)
 Frame = +2

Query: 302 DSLDYEHLNRAMIDECKEYDKMDKXLLKLNRAKVQTMCLKTEKGKLSKENIQLKHYIKKY 481
           DSL+ E L   ++ +C E +++ + L  L R +V  M        L K   QLKH   KY
Sbjct: 750 DSLNLESLEHLILSDCHELEQLPEDLGNLYRLEVLDMSDCYRVQVLPKTFCQLKHL--KY 807

Query: 482 L 484
           L
Sbjct: 808 L 808


>02_05_0287 -
           27525722-27525812,27525927-27526057,27526945-27527022,
           27527080-27527186,27527302-27527380,27528001-27528096,
           27528192-27528443,27528691-27528840,27528953-27529277,
           27529373-27529584
          Length = 506

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/48 (29%), Positives = 27/48 (56%)
 Frame = -1

Query: 355 FFAFVNHCSIQMFIVKRIHIILGVIKNNVIADVFVFTANISQLNYFIY 212
           FFA    C I  F+ +R++    + K +V+    V TA+  ++NY+++
Sbjct: 52  FFAPNTTCDISPFVKERLNRYGSIFKTSVVGRPVVVTAD-PEMNYYVF 98


>08_02_0179 -
           13904027-13904125,13904177-13904259,13906019-13906066,
           13906215-13906308,13907114-13907184,13910157-13910343,
           13910714-13910717,13910847-13910919,13911044-13911088,
           13912046-13912442
          Length = 366

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 26/91 (28%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
 Frame = +2

Query: 278 FYDSENDVDSLDYEHLN--RAMIDECKEYDKMDKXLLKLNRAK-VQTMCLKTEKGKLSKE 448
           ++D+  DVDSLD E LN    ++D  ++ +   K +  L+  K +Q +  +T    L+ +
Sbjct: 116 YFDAGFDVDSLDLEVLNGLALLVDVPRDDNITAKMMESLHIPKGIQRVLFRT----LNTD 171

Query: 449 NIQLKHYIKKYLTELALRE-KDRPHSVKIAS 538
           ++    +I  Y   L++ E  + PH VK++S
Sbjct: 172 SMSTDSFI-AYSYNLSIMEFPEIPHLVKLSS 201


>04_01_0261 +
           3516461-3516629,3517729-3517823,3518724-3518834,
           3519179-3519213,3519864-3519954,3520124-3520196,
           3521127-3521257,3524325-3524720
          Length = 366

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 15/48 (31%), Positives = 28/48 (58%)
 Frame = +2

Query: 365 MDKXLLKLNRAKVQTMCLKTEKGKLSKENIQLKHYIKKYLTELALREK 508
           ++K +L   + K++   LK +  +LSK+N +L    K+ +   ALR+K
Sbjct: 258 INKQILGAEQYKMENRDLKRQNKELSKQNKELMEQSKELMELPALRKK 305


>07_03_0557 +
           19447367-19447517,19447630-19447730,19448359-19448480,
           19448725-19448912,19449000-19449178,19449370-19449711,
           19449795-19449859,19450259-19450317,19450486-19450573,
           19450653-19450722,19450759-19450992,19451072-19451411,
           19451643-19451691,19452690-19452780,19453077-19453442
          Length = 814

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
 Frame = +2

Query: 263 GDNI--VFYDSENDVDSLDYEHLNRAMIDE-CKEYDKMDKXLLKLNRAKVQTMCLKTEKG 433
           G N+  +FYD ++ + S+  + +++  +DE CK Y+ M+  ++      +Q M    EK 
Sbjct: 501 GSNLSKLFYDCKDYILSIYQDDISKEKLDEICKVYETME-AIVTHPEETLQIMEAPDEKS 559

Query: 434 KLSKEN 451
            L  +N
Sbjct: 560 PLESKN 565


>02_04_0558 + 23866513-23866845
          Length = 110

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +2

Query: 323 LNRAMIDECKEYDKMDKXLLKLNRAKVQTMCLKTEKGKLSKENIQL 460
           LN++  + C+E DK     L   RAK+Q + +K E  K+    + +
Sbjct: 55  LNKSHAEVCREADKNSAAYLLAKRAKLQAL-IKEEWAKIDFSRVHV 99


>01_06_1763 +
           39723596-39723691,39724030-39724672,39724773-39725275,
           39725786-39725905,39726356-39726421,39727146-39727256,
           39727650-39727726,39727996-39728063,39728384-39728497,
           39728593-39728774,39728926-39728994,39729294-39729449,
           39729657-39729734
          Length = 760

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 25/94 (26%), Positives = 46/94 (48%), Gaps = 1/94 (1%)
 Frame = +2

Query: 299 VDSLDYEHLNRAMIDECKEYDKMDKXLL-KLNRAKVQTMCLKTEKGKLSKENIQLKHYIK 475
           ++S+  E+ N  +  EC   D+  K L  ++   + + + L++ + KL KE   L   I 
Sbjct: 479 LESVRTEYANAQL--ECNAADERAKVLAAEVILLEDKALRLRSSELKLEKEIEGLSSEIS 536

Query: 476 KYLTELALREKDRPHSVKIASGVQKLDANGKTLN 577
            Y  +++  EK+R H   + S V+ L    K L+
Sbjct: 537 SYRRKVSSLEKERQH---LQSTVEALQEEKKLLH 567


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,834,812
Number of Sequences: 37544
Number of extensions: 269154
Number of successful extensions: 721
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 709
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 720
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)