Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_A19
(655 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46461| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.15
SB_49250| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.20
SB_40040| Best HMM Match : hATC (HMM E-Value=3.7e-08) 31 0.62
SB_58820| Best HMM Match : DUF1014 (HMM E-Value=6.4) 31 0.82
SB_26152| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_16794| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_26456| Best HMM Match : GTP_EFTU_D2 (HMM E-Value=0.00011) 29 2.5
SB_53634| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_41489| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.3
SB_24575| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_40530| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_42496| Best HMM Match : rve (HMM E-Value=0.02) 28 5.8
SB_42014| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.083) 28 5.8
SB_26930| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_52664| Best HMM Match : Filament (HMM E-Value=0.3) 28 5.8
SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_58610| Best HMM Match : RVT_1 (HMM E-Value=0.061) 28 7.6
SB_56420| Best HMM Match : CUB (HMM E-Value=0.45) 28 7.6
SB_51198| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 28 7.6
SB_39891| Best HMM Match : Seryl_tRNA_N (HMM E-Value=0.11) 28 7.6
SB_6951| Best HMM Match : PXA (HMM E-Value=6.2) 28 7.6
SB_4883| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
>SB_46461| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 817
Score = 33.5 bits (73), Expect = 0.15
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 8/106 (7%)
Frame = +2
Query: 236 DICRKYENVGDNIVFYDSENDVDSLDYEHLNRAMIDECKEYDKMDKXLLK--------LN 391
D C E+ G + EN + E L++ + DE KE + LL+ ++
Sbjct: 151 DSCENTEDTGPKLGDMTIENQRLRQENEFLSKEL-DEFKERNTNLTELLERLHCCEHEIS 209
Query: 392 RAKVQTMCLKTEKGKLSKENIQLKHYIKKYLTELALREKDRPHSVK 529
RAK +C+K E+ KL E ++L +K+ L +E + +K
Sbjct: 210 RAKETIVCMKAERKKLKSEKMELLSQMKQVYAILEDKESELGEFIK 255
>SB_49250| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 638
Score = 33.1 bits (72), Expect = 0.20
Identities = 30/145 (20%), Positives = 64/145 (44%), Gaps = 1/145 (0%)
Frame = +2
Query: 149 INHNYIRSNVNFQRLEEVKQKINKVIQLADICRKYENVGDNIVFYDSENDVDSLDYEHLN 328
+N R N +R+ + K+++NK + + ++ E + + E + + E LN
Sbjct: 477 VNKETERVNKERERVNKKKERLNK--EKEQLNKEKEQLNKERKRLNKERKRVNKERERLN 534
Query: 329 RAMIDECKEYDKMDKXLLKLNRAKVQTMCLKTEKGKLSKENIQLKHYIKKYLTEL-ALRE 505
+ KE +++DK +LN+ + + K K+ K + K + K + L RE
Sbjct: 535 KEKERLNKETERLDKTRERLNKERKRLNKKKERLNKVRKRLNKEKERLNKEMERLDKTRE 594
Query: 506 KDRPHSVKIASGVQKLDANGKTLNR 580
+ ++ ++L+ K LN+
Sbjct: 595 RLNKERKRLNKERKRLNKERKRLNK 619
>SB_40040| Best HMM Match : hATC (HMM E-Value=3.7e-08)
Length = 824
Score = 31.5 bits (68), Expect = 0.62
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -3
Query: 437 TFLSQFSSTLSVPLLCLISAXTYPFYRILCIRQSLLYSNVHSQANPHHS 291
T L Q+ S+++VPL +S +P++ + + L Y Q PHHS
Sbjct: 730 TLLWQYHSSMAVPLFYGLSTLLWPYHFSMAV--PLFYGRTTLQLWPHHS 776
>SB_58820| Best HMM Match : DUF1014 (HMM E-Value=6.4)
Length = 238
Score = 31.1 bits (67), Expect = 0.82
Identities = 18/63 (28%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 329 RAMIDECKEYDKMDKXLLKLNRAKVQTMC-LKTEKGKLSKENIQLKHYIKKYLTELALRE 505
+A++ ++ +++ L KL ++K+Q K E+ KL KE +QL+H + E R+
Sbjct: 16 KALVVYHEDEKRLNLLLHKLEQSKLQKYIDYKLEEKKLQKELLQLRHEQMHLMQESRQRQ 75
Query: 506 KDR 514
K++
Sbjct: 76 KEK 78
>SB_26152| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1380
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/84 (27%), Positives = 37/84 (44%)
Frame = +2
Query: 404 QTMCLKTEKGKLSKENIQLKHYIKKYLTELALREKDRPHSVKIASGVQKLDANGKTLNRP 583
+T + T G SKEN QL H + + A R+ RP + S K + K N P
Sbjct: 907 RTTPMSTNDGDTSKENQQLFHKCTQAQKKKAKRKNQRPKISQRKSRTGKQECQKKE-NEP 965
Query: 584 VTCIEGALCNAVMHEKRMKTYVKK 655
+ G +++H R + V++
Sbjct: 966 ELSVIGK--ESILHNFRTEAIVEQ 987
>SB_21701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1906
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/90 (22%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Frame = +2
Query: 326 NRAMIDECKEYDKMDKXLLKLNRAKVQTMCLKTEKGKLSKENIQLK-HYIKKYLTELALR 502
N A+ +CK+ D+M + ++KL + + +G++ + L +K + +
Sbjct: 1537 NEALATKCKDADEMRRNIIKLTTQLREADKARLNQGEIDDLKLSLSISQAEKQQLQTRID 1596
Query: 503 EKDRPHS--VKIASGVQKLDANGKTLNRPV 586
E DR H+ + A VQ++ +L V
Sbjct: 1597 ELDRAHADLRETAEEVQRIKKENASLKAQV 1626
>SB_16794| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1407
Score = 29.5 bits (63), Expect = 2.5
Identities = 39/168 (23%), Positives = 75/168 (44%), Gaps = 13/168 (7%)
Frame = +2
Query: 191 LEEVKQKINKVIQLADICRKY---ENVGDNIVFYDSE-NDVDSLDYEHLN-----RAMID 343
+EE+K + +V QLA + E+ G+++ DS+ + + L E R +D
Sbjct: 566 IEELKNSLEEVKQLAAQYEQEVAAESQGEDLELMDSQLEEYNRLKEEARRETAAVRQQLD 625
Query: 344 ECKEYDKMDKXLLKLNRAKVQTMCLKTEKGKLSKENIQLKHYIKK---YL-TELALREKD 511
+ D+ LL + K LKT + +L ++++QL+ I K YL T + EK
Sbjct: 626 RINREQQSDQELL--DGVKQTKTDLKTRQKQLQEQSVQLRERIDKLEEYLTTNVEHVEKL 683
Query: 512 RPHSVKIASGVQKLDANGKTLNRPVTCIEGALCNAVMHEKRMKTYVKK 655
+ S ++S V + ++ + ++ L A ++ + KK
Sbjct: 684 KAESESLSSEVSDANTRHHDISGKLESVQLELNEAKSNKHESARHQKK 731
>SB_26456| Best HMM Match : GTP_EFTU_D2 (HMM E-Value=0.00011)
Length = 343
Score = 29.5 bits (63), Expect = 2.5
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +2
Query: 236 DICRKYENVGDNIVFYDSENDVDSLDYEHLNRAMIDECKEYDKMD 370
++C K E+ GD Y D L ++R ID K+Y + D
Sbjct: 280 EVCIKIESTGDAPKLYGRHFDYTDLIVSKISRTSIDAVKDYFRED 324
>SB_53634| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 408
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/64 (26%), Positives = 32/64 (50%)
Frame = +2
Query: 383 KLNRAKVQTMCLKTEKGKLSKENIQLKHYIKKYLTELALREKDRPHSVKIASGVQKLDAN 562
K + V CL EK K ++LK K+Y L ++ + RP+ + + + KL+ N
Sbjct: 127 KTVKVAVSVECLTNEKYDAGKRLLRLKDNQKQY-ESLDIQNQSRPYDIFVVD-IGKLNLN 184
Query: 563 GKTL 574
+++
Sbjct: 185 NESI 188
>SB_41489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 390
Score = 29.1 bits (62), Expect = 3.3
Identities = 20/88 (22%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = +2
Query: 185 QRLEEVKQKINKVIQLADICRK-YENVGDNIVFYDSENDVDSLDYEHLNRAMIDECKEYD 361
++ EE + + K ++ +K + + I + EN +E NR++++ E
Sbjct: 142 EKFEEFQSTLTKSNEMFVTFKKEMDKMTKTIKKLEKENKTWKSRFEGTNRSLLEMLDERA 201
Query: 362 KMDKXLLKLN--RAKVQTMCLKTEKGKL 439
KM+K L L+ K++++C +K +L
Sbjct: 202 KMEKERLALSARNDKLESLCRAMQKERL 229
>SB_24575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1741
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/80 (26%), Positives = 35/80 (43%)
Frame = +2
Query: 416 LKTEKGKLSKENIQLKHYIKKYLTELALREKDRPHSVKIASGVQKLDANGKTLNRPVTCI 595
+ T G SKEN QL H + + A R+ RP + + S K + K N P +
Sbjct: 1272 MSTNDGDTSKENQQLLHKCAQAQKKKAKRKNQRPKTSQRKSRTGKQECQKKE-NEPELSV 1330
Query: 596 EGALCNAVMHEKRMKTYVKK 655
G +++H + V++
Sbjct: 1331 IGK--ESILHNFNAEAIVEQ 1348
>SB_40530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 28.7 bits (61), Expect = 4.4
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 7/130 (5%)
Frame = +2
Query: 287 SENDVDSLDYEHLNRAMIDECKEYDKMDKXLLK-LNRAKVQTMCLKTE----KGKLSKEN 451
S+ D+D+L L R + KE+ D L K +N K + K E K K+ + N
Sbjct: 163 SQGDIDTLKVTPLERDYVTLLKEWVDKDLDLSKEVNETKKEVQETKKEVQETKIKVDETN 222
Query: 452 IQLKHYIKKYLTELALREKDRPHSVKIASGVQKLDANGKTLNRPVTCIEG--ALCNAVMH 625
++ H + L+E++L K +V +AS ++ + + +T +G A H
Sbjct: 223 -EVVHKMDGKLSEMSL--KAEKMAVDLASLKEEFSSKKVNSKKDITAAKGDEAASGKTSH 279
Query: 626 EKRMKTYVKK 655
+ ++ KK
Sbjct: 280 DPGNESLPKK 289
>SB_42496| Best HMM Match : rve (HMM E-Value=0.02)
Length = 371
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 580 TVKCLSIRIQLLNTRGYLDTVWSIFFSKCQFSEILLNVMF 461
T + L + +++N RG DTVWS Q ++ L +MF
Sbjct: 268 TDEFLQVLSRMVNRRGVCDTVWSDNAKSFQAADRELEIMF 307
>SB_42014| Best HMM Match : Myosin_tail_1 (HMM E-Value=0.083)
Length = 1007
Score = 28.3 bits (60), Expect = 5.8
Identities = 29/94 (30%), Positives = 37/94 (39%), Gaps = 4/94 (4%)
Frame = +2
Query: 191 LEEVKQKINKVIQLADICRKYENVGDNI----VFYDSENDVDSLDYEHLNRAMIDECKEY 358
LEE KQ N +LA + E I YD E D E LN +IDE K
Sbjct: 820 LEERKQNQNGSEELATCRSELEKAKGEIEKAWTLYDKEKD----RLEKLNGQLIDELKSL 875
Query: 359 DKMDKXLLKLNRAKVQTMCLKTEKGKLSKENIQL 460
+ + K + Q + KGK +IQL
Sbjct: 876 TSVLDEMKKESENDAQCQKILDLKGKQEDLSIQL 909
>SB_26930| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1533
Score = 28.3 bits (60), Expect = 5.8
Identities = 21/80 (26%), Positives = 35/80 (43%)
Frame = +2
Query: 416 LKTEKGKLSKENIQLKHYIKKYLTELALREKDRPHSVKIASGVQKLDANGKTLNRPVTCI 595
+ T G SKEN QL H + + A R+ RP + + S K + K N P +
Sbjct: 760 MSTNDGDTSKENQQLLHKCAQAQKKKAKRKNQRPKTSQRKSRTGKQECQKKE-NEPELSV 818
Query: 596 EGALCNAVMHEKRMKTYVKK 655
G +++H + V++
Sbjct: 819 IGK--ESILHNFSAEAIVEQ 836
>SB_52664| Best HMM Match : Filament (HMM E-Value=0.3)
Length = 394
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/65 (27%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Frame = +2
Query: 326 NRAMIDECKEYDKMDKXLLKLNR---AKVQTMCLKTEKGKLSKENIQLKHYIKKYLTELA 496
N+A+ ++C+ ++ K LL+ N+ K Q M + K S E ++ ++Y + E
Sbjct: 24 NKALQNDCQLAGELGKTLLEQNKEWEKKYQEMSEEYVIAKTSVEELKQENYSLRSRREAD 83
Query: 497 LREKD 511
+R KD
Sbjct: 84 IRTKD 88
>SB_50937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2480
Score = 27.9 bits (59), Expect = 7.6
Identities = 24/96 (25%), Positives = 41/96 (42%), Gaps = 2/96 (2%)
Frame = +2
Query: 287 SENDVDSLDYEHLNRAMIDECKEYDKMDKXLLK-LNRAKVQTMCLKTEKGKLSKENIQLK 463
S+ D+D+L L R + KE+ D L K +N K + K + + KE + K
Sbjct: 1259 SQGDIDTLKVTPLERDYVTLLKEWVDKDLDLSKEVNETKKEVQETKKDVQETKKEVDETK 1318
Query: 464 HYIKKYLTELALREKDRPHSVK-IASGVQKLDANGK 568
+ + E+ +KD + K + K+D K
Sbjct: 1319 TKVDETKKEVQETKKDVQETKKEVQETKTKVDETNK 1354
>SB_58610| Best HMM Match : RVT_1 (HMM E-Value=0.061)
Length = 1445
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +2
Query: 227 QLADICRKY-ENVGDNIVFYDSENDVDSLDYEHLNRAMIDECKEYDK--MDKXLLKL 388
QL I + + EN+ +VFY S+ D+ ++ +++ ++ KEY K M K KL
Sbjct: 1299 QLTSITKPFRENIAALVVFYTSKADMKAILHDYGAELSEEKMKEYMKALMTKKFSKL 1355
>SB_56420| Best HMM Match : CUB (HMM E-Value=0.45)
Length = 1017
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 239 ICRKYENVGDNIVFYDSENDVDSL-DYEHLNRAMIDECKEYDKMDKXLLKLNRAKVQTMC 415
+C KYEN+ N V Y + S ++E + + +CK +K+D + + + +++
Sbjct: 267 LCEKYENMNKNTVEYKIWLESKSYREWEKYHESGNVDCKRVNKLD-CIGHVQKRMGKSLI 325
Query: 416 LKTEKGKL 439
KGKL
Sbjct: 326 ALQSKGKL 333
>SB_51198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1627
Score = 27.9 bits (59), Expect = 7.6
Identities = 27/111 (24%), Positives = 50/111 (45%), Gaps = 12/111 (10%)
Frame = +2
Query: 245 RKYENVGDNIVFYDSENDVDSLDYEHLNRAMIDECKEYDKMDKXLLK---------LNRA 397
R ++GDNI S +D ++ R+ + +E DK + LLK L+++
Sbjct: 228 RTITDIGDNIKSEKSAKFIDIVEVAKRKRSKNSQVREVDKPAQYLLKNLQSEIRSTLDKS 287
Query: 398 KVQTMCLK-TEKGKLSKENIQLKHYIKKYLTEL--ALREKDRPHSVKIASG 541
+ + +K T +G + N+ Y+ K TE +++K K A+G
Sbjct: 288 NIFSYDIKWTSEGVTPEGNLTHGQYLGKLCTEFYDVMKKKITDAITKRAAG 338
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = +2
Query: 317 EHLNRAMIDECKEYDKMDKXLLKLNRAKVQTMCLKTEKGKLSKENIQLKHYIKKYLTELA 496
E L+ A I +CK +D + K++ + EK L K+N L +K ELA
Sbjct: 173 EKLSAANIAKCKAEAALDDIESQGTSFKIREKRMDQEKVLLQKQNESLSAELKAKTEELA 232
Query: 497 LREKDR 514
K++
Sbjct: 233 TIRKEK 238
>SB_39891| Best HMM Match : Seryl_tRNA_N (HMM E-Value=0.11)
Length = 285
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 287 SENDVDSLDYEHLNRAMIDECKEYDKMDKXLLK-LNRAKVQTMCLKTEKGKLSKENIQLK 463
S+ D+D+L L R + KE+ D L K +N K + KT+ + +KE ++K
Sbjct: 165 SQGDIDALKVTPLERDYVTLLKEWFDRDLDLSKEVNETKKEVQETKTKVDEANKEVHEVK 224
>SB_6951| Best HMM Match : PXA (HMM E-Value=6.2)
Length = 284
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/68 (26%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +2
Query: 239 ICRKYENVGDNIVFYDSENDVDSL-DYEHLNRAMIDECKEYDKMDKXLLKLNRAKVQTMC 415
+C KYEN+ N V Y + S ++E + + +CK +K+D + + + +++
Sbjct: 22 LCEKYENMNKNTVEYKIWLESKSYREWEKYHESGNVDCKRVNKLD-CIGHVQKRMGKSLI 80
Query: 416 LKTEKGKL 439
KGKL
Sbjct: 81 ALQSKGKL 88
>SB_4883| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 721
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 245 RKYENVGDNIVFYDSENDVDSLDYEHLNRAMIDECKE-YDKMDKXLLK 385
R+ E ++V E+D+D ++H A+ DE KE K K L K
Sbjct: 666 RRLEEQEQDVVSESHESDIDPEKWDHAQDALGDEAKELISKKVKSLRK 713
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,073,211
Number of Sequences: 59808
Number of extensions: 351988
Number of successful extensions: 1174
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1166
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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