Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_A19
         (655 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.     25   1.6  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    24   3.7  
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    24   4.8  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    24   4.8  
AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase ...    24   4.8  
DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    23   8.4  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    23   8.4  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   8.4  

>DQ383819-1|ABD38144.1|  377|Anopheles gambiae abdominal-B protein.
          Length = 377

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 326 SNVHSQANPHHSRSH 282
           S+ HSQA PHH+  H
Sbjct: 346 SHSHSQAQPHHNPHH 360


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -1

Query: 184 KVYIRSNIIMVYELLNSTYLNSYENN*LLFS*GITCT 74
           +VY + N+ +VY  +  TY  S+    L  S   T T
Sbjct: 459 EVYAKENLALVYIFVKDTYYRSFTKGELFGSKPSTTT 495


>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 18/73 (24%), Positives = 31/73 (42%)
 Frame = +2

Query: 332  AMIDECKEYDKMDKXLLKLNRAKVQTMCLKTEKGKLSKENIQLKHYIKKYLTELALREKD 511
            A +   K+  K  K   K+N    +      ++ KL K+N +LK  IKK   E+     +
Sbjct: 864  AAVTALKQQIKQHKE--KMNSQSKELKAKYHQRDKLLKQNDELKLEIKKKENEITKVRNE 921

Query: 512  RPHSVKIASGVQK 550
                    SG+++
Sbjct: 922  NKDGYDRISGMEQ 934


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 184 KVYIRSNIIMVYELLNSTYLNSY 116
           +VY + N+ +VY  +  TY  S+
Sbjct: 459 EVYAKENLALVYIFVKDTYYRSF 481


>AJ439060-8|CAD27759.1|  808|Anopheles gambiae putative V-ATPase
           protein.
          Length = 808

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = -1

Query: 544 NTRGYLDTVWSIFFSKCQFSEILLNVMFKL 455
           +T  YL  +W++  +  + SE+L N++F +
Sbjct: 705 HTASYL-RLWALSLAHAELSEVLYNMVFTI 733


>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 7/18 (38%), Positives = 14/18 (77%)
 Frame = -3

Query: 245 GKYQPTELLYLFFVSLLP 192
           G+++ + + YLF V++LP
Sbjct: 68  GRFEESVIAYLFIVNILP 85


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +1

Query: 538  WCSEAGCEWKDT*PSS 585
            WC+E   +WK T P++
Sbjct: 1524 WCAERDMKWKFTPPAA 1539


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/27 (29%), Positives = 19/27 (70%)
 Frame = +2

Query: 149 INHNYIRSNVNFQRLEEVKQKINKVIQ 229
           I + Y++ NV  ++ EE+ ++I+ +I+
Sbjct: 85  IVYYYVKPNVGVRQFEEIMERIDILIR 111


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 629,564
Number of Sequences: 2352
Number of extensions: 13024
Number of successful extensions: 26
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)