Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_A19
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like p... 33 0.18
AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like ... 33 0.18
AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like ... 33 0.18
AF125455-2|AAP13747.2| 431|Caenorhabditis elegans Hypothetical ... 33 0.23
Z66515-10|CAI70410.1| 510|Caenorhabditis elegans Hypothetical p... 31 0.54
Z66515-9|CAA91346.1| 519|Caenorhabditis elegans Hypothetical pr... 31 0.54
Z97628-3|CAB10727.1| 819|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z79755-13|CAB02114.1| 819|Caenorhabditis elegans Hypothetical p... 30 1.2
AL023837-1|CAA19499.1| 718|Caenorhabditis elegans Hypothetical ... 30 1.2
AL132904-5|CAC35837.2| 406|Caenorhabditis elegans Hypothetical ... 30 1.6
U40946-4|AAA81726.1| 414|Caenorhabditis elegans Hypothetical pr... 29 2.2
AF000195-6|AAO61435.1| 350|Caenorhabditis elegans Hypothetical ... 29 2.2
AF000195-5|AAC24265.2| 504|Caenorhabditis elegans Hypothetical ... 29 2.2
U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z83114-9|CAB05553.2| 941|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z83114-8|CAJ76944.1| 875|Caenorhabditis elegans Hypothetical pr... 28 6.7
U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily ass... 28 6.7
U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily ass... 28 6.7
AL021483-8|CAI79173.1| 941|Caenorhabditis elegans Hypothetical ... 28 6.7
Z92972-1|CAB07483.1| 283|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z82057-2|CAD89759.1| 561|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z74476-6|CAA98967.1| 1139|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z74473-6|CAA98951.1| 1139|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z30973-4|CAA83220.3| 431|Caenorhabditis elegans Hypothetical pr... 27 8.8
U41991-8|AAA83348.2| 500|Caenorhabditis elegans Hypothetical pr... 27 8.8
U20168-1|AAA66364.1| 1139|Caenorhabditis elegans Lin-25 protein ... 27 8.8
AL034393-11|CAA22324.2| 2417|Caenorhabditis elegans Hypothetical... 27 8.8
AJ250261-1|CAB59919.1| 2417|Caenorhabditis elegans hypothetical ... 27 8.8
AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical ... 27 8.8
>U61947-10|AAB03132.1| 932|Caenorhabditis elegans Kinesin-like
protein protein 18 protein.
Length = 932
Score = 33.1 bits (72), Expect = 0.18
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +2
Query: 176 VNFQRLEEVKQKINKVIQLADICRKYENVG--DNIVFYDSENDVDSLDYEHLNRAMIDEC 349
VN + Q+ N + A C N+ + ++ D E+ E R +DE
Sbjct: 305 VNMHPDRDFAQESNSTLMFAQSCTMIMNIATRNEVMTGDQESSYKKAIQEL--RQEVDET 362
Query: 350 KEYDKMDKXLLKLNRAKVQTMCLKTEKGKLSKENIQLK 463
+E + + +L+ A+V+ + LKTE L EN+ L+
Sbjct: 363 REKVRTE-FASQLDEAEVEQLRLKTENNSLRLENVDLR 399
>AY211948-1|AAO34669.1| 932|Caenorhabditis elegans kinesin-like
protein-18 protein.
Length = 932
Score = 33.1 bits (72), Expect = 0.18
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +2
Query: 176 VNFQRLEEVKQKINKVIQLADICRKYENVG--DNIVFYDSENDVDSLDYEHLNRAMIDEC 349
VN + Q+ N + A C N+ + ++ D E+ E R +DE
Sbjct: 305 VNMHPDRDFAQESNSTLMFAQSCTMIMNIATRNEVMTGDQESSYKKAIQEL--RQEVDET 362
Query: 350 KEYDKMDKXLLKLNRAKVQTMCLKTEKGKLSKENIQLK 463
+E + + +L+ A+V+ + LKTE L EN+ L+
Sbjct: 363 REKVRTE-FASQLDEAEVEQLRLKTENNSLRLENVDLR 399
>AB033538-1|BAB19356.2| 930|Caenorhabditis elegans kinesin like
protein KLP-18 protein.
Length = 930
Score = 33.1 bits (72), Expect = 0.18
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Frame = +2
Query: 176 VNFQRLEEVKQKINKVIQLADICRKYENVG--DNIVFYDSENDVDSLDYEHLNRAMIDEC 349
VN + Q+ N + A C N+ + ++ D E+ E R +DE
Sbjct: 303 VNMHPDRDFAQESNSTLMFAQSCTMIMNIATRNEVMTGDQESSYKKAIQEL--RQEVDET 360
Query: 350 KEYDKMDKXLLKLNRAKVQTMCLKTEKGKLSKENIQLK 463
+E + + +L+ A+V+ + LKTE L EN+ L+
Sbjct: 361 REKVRTE-FASQLDEAEVEQLRLKTENNSLRLENVDLR 397
>AF125455-2|AAP13747.2| 431|Caenorhabditis elegans Hypothetical
protein Y48A5A.1 protein.
Length = 431
Score = 32.7 bits (71), Expect = 0.23
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = -3
Query: 449 SLSITFLSQFSSTLSVPLLCLISAXTYPFYRILCIRQSLLYSNVH 315
S S++F ++FSS L C A TYP YR + Q ++ H
Sbjct: 290 SPSLSFFAKFSSVKECLLACTRRALTYPLYRSFQLTQRVIQDVCH 334
>Z66515-10|CAI70410.1| 510|Caenorhabditis elegans Hypothetical
protein R53.1b protein.
Length = 510
Score = 31.5 bits (68), Expect = 0.54
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 449 NIQLKHYIKKYLTELALREKDRPHSVKIASGVQKLDANGKTLNRPV 586
NIQ+ + T LA +K RP + + G + D NGK + PV
Sbjct: 377 NIQVLEFPGPLKTGLAALKKTRPSIIPVLMGSRATDPNGKYMKTPV 422
>Z66515-9|CAA91346.1| 519|Caenorhabditis elegans Hypothetical
protein R53.1a protein.
Length = 519
Score = 31.5 bits (68), Expect = 0.54
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = +2
Query: 449 NIQLKHYIKKYLTELALREKDRPHSVKIASGVQKLDANGKTLNRPV 586
NIQ+ + T LA +K RP + + G + D NGK + PV
Sbjct: 386 NIQVLEFPGPLKTGLAALKKTRPSIIPVLMGSRATDPNGKYMKTPV 431
>Z97628-3|CAB10727.1| 819|Caenorhabditis elegans Hypothetical
protein F43G9.12 protein.
Length = 819
Score = 30.3 bits (65), Expect = 1.2
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +2
Query: 281 YDSENDVDSLDYEHLNRAMIDECKEYDKMDKXLLKLNRA-KVQTMCLK--TEKGKLSKEN 451
+D++ DS ++ ++E K K+++ KL + K++ L +K KLSKE+
Sbjct: 47 FDADEGADSTFKLKKDKKKVEELKRQHKLEEEAEKLYKEEKIRKEALDKIVKKEKLSKED 106
Query: 452 IQLKHYIKKYLTELALREKDRPH 520
+ K+ KYL + R+K H
Sbjct: 107 KKTKNERHKYLDK--YRDKSAKH 127
>Z79755-13|CAB02114.1| 819|Caenorhabditis elegans Hypothetical
protein F43G9.12 protein.
Length = 819
Score = 30.3 bits (65), Expect = 1.2
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +2
Query: 281 YDSENDVDSLDYEHLNRAMIDECKEYDKMDKXLLKLNRA-KVQTMCLK--TEKGKLSKEN 451
+D++ DS ++ ++E K K+++ KL + K++ L +K KLSKE+
Sbjct: 47 FDADEGADSTFKLKKDKKKVEELKRQHKLEEEAEKLYKEEKIRKEALDKIVKKEKLSKED 106
Query: 452 IQLKHYIKKYLTELALREKDRPH 520
+ K+ KYL + R+K H
Sbjct: 107 KKTKNERHKYLDK--YRDKSAKH 127
>AL023837-1|CAA19499.1| 718|Caenorhabditis elegans Hypothetical
protein Y37H2C.1 protein.
Length = 718
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/29 (51%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = -1
Query: 190 PLKVYIRS-NIIMVYELLNSTYLNSYENN 107
PL VY S +I++V LN YL+S+ENN
Sbjct: 279 PLLVYAASISIVLVITFLNYKYLDSHENN 307
>AL132904-5|CAC35837.2| 406|Caenorhabditis elegans Hypothetical
protein Y111B2A.9a protein.
Length = 406
Score = 29.9 bits (64), Expect = 1.6
Identities = 20/46 (43%), Positives = 23/46 (50%)
Frame = -3
Query: 356 ILCIRQSLLYSNVHSQANPHHSRSHKKQCYRRRFRIYGKYQPTELL 219
ILC +QSL SQ +PH SR YRRR R P+E L
Sbjct: 54 ILCAQQSLRQLPSPSQTSPHGSRF--MDGYRRRMRQASLNLPSETL 97
>U40946-4|AAA81726.1| 414|Caenorhabditis elegans Hypothetical
protein W05H9.1 protein.
Length = 414
Score = 29.5 bits (63), Expect = 2.2
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 9/80 (11%)
Frame = +2
Query: 194 EEVKQKINKVIQLADICRKYENVGDNIVFYDSEND-VDSLDYEHLNRAMIDEC------K 352
E +KQ+IN +LADI ++ +NVGD Y+ + D + L + + + + D+ K
Sbjct: 233 EALKQQIND--KLADIEQQGKNVGDQAKTYEQKKDELSDLIQDLIGQGVKDKMANQISDK 290
Query: 353 EYDKMDKXLLK--LNRAKVQ 406
++DK LK LN KV+
Sbjct: 291 LQGQLDKAALKEVLNEKKVE 310
>AF000195-6|AAO61435.1| 350|Caenorhabditis elegans Hypothetical
protein C32F10.8b protein.
Length = 350
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 278 FYDSENDVDSLDYEHLNRAMIDECKEYD 361
+Y SE+ S+D L R+ D CKEYD
Sbjct: 215 YYLSESSNWSMDEAELERSFNDHCKEYD 242
>AF000195-5|AAC24265.2| 504|Caenorhabditis elegans Hypothetical
protein C32F10.8a protein.
Length = 504
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 278 FYDSENDVDSLDYEHLNRAMIDECKEYD 361
+Y SE+ S+D L R+ D CKEYD
Sbjct: 215 YYLSESSNWSMDEAELERSFNDHCKEYD 242
>U41554-1|AAA83296.2| 556|Caenorhabditis elegans Hypothetical
protein F57C12.2 protein.
Length = 556
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Frame = +2
Query: 149 INHNYIRSNVNFQRLEE---VKQKINKVIQLADICRKYENVGDNIVFYDSENDVDSLDYE 319
I H+ +R + ++++ K++I QL D + NV + F+D+ D S D++
Sbjct: 298 ITHSSLRYAGIYLKMQDYGGTKEEIEN--QLRDETTTFSNVDAMLFFFDASVDDMSADFD 355
Query: 320 HLNRAM 337
H +A+
Sbjct: 356 HYQKAL 361
>Z83114-9|CAB05553.2| 941|Caenorhabditis elegans Hypothetical
protein K09B11.9a protein.
Length = 941
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/48 (25%), Positives = 28/48 (58%)
Frame = +2
Query: 317 EHLNRAMIDECKEYDKMDKXLLKLNRAKVQTMCLKTEKGKLSKENIQL 460
++L ++DEC E + ++ +L+ A V CLK + K ++ ++++
Sbjct: 591 QYLTTNLVDECGEGSESEQQVLRGLMAFVLLSCLKNLQSKEARSSMEI 638
>Z83114-8|CAJ76944.1| 875|Caenorhabditis elegans Hypothetical
protein K09B11.9b protein.
Length = 875
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/48 (25%), Positives = 28/48 (58%)
Frame = +2
Query: 317 EHLNRAMIDECKEYDKMDKXLLKLNRAKVQTMCLKTEKGKLSKENIQL 460
++L ++DEC E + ++ +L+ A V CLK + K ++ ++++
Sbjct: 525 QYLTTNLVDECGEGSESEQQVLRGLMAFVLLSCLKNLQSKEARSSMEI 572
>U23168-5|ABD63247.1| 2702|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform e protein.
Length = 2702
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -3
Query: 431 LSQFSSTLSVPLLCLISAXTYPFYRILCIRQSLLYSN-VHSQANPHHSRSHKKQCYRR 261
LS S + S ++ L S +P +LC S+ +N VH Q + HH + + Y R
Sbjct: 1734 LSAGSKSESCKIVRLASNLGHPTSLVLCESSSVQETNNVHYQRDEHHEHISETKSYPR 1791
>U23168-1|AAU87832.1| 7548|Caenorhabditis elegans Temporarily assigned
gene nameprotein 308, isoform c protein.
Length = 7548
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = -3
Query: 431 LSQFSSTLSVPLLCLISAXTYPFYRILCIRQSLLYSN-VHSQANPHHSRSHKKQCYRR 261
LS S + S ++ L S +P +LC S+ +N VH Q + HH + + Y R
Sbjct: 6580 LSAGSKSESCKIVRLASNLGHPTSLVLCESSSVQETNNVHYQRDEHHEHISETKSYPR 6637
>AL021483-8|CAI79173.1| 941|Caenorhabditis elegans Hypothetical
protein K09B11.9a protein.
Length = 941
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/48 (25%), Positives = 28/48 (58%)
Frame = +2
Query: 317 EHLNRAMIDECKEYDKMDKXLLKLNRAKVQTMCLKTEKGKLSKENIQL 460
++L ++DEC E + ++ +L+ A V CLK + K ++ ++++
Sbjct: 591 QYLTTNLVDECGEGSESEQQVLRGLMAFVLLSCLKNLQSKEARSSMEI 638
>Z92972-1|CAB07483.1| 283|Caenorhabditis elegans Hypothetical
protein T19C9.1 protein.
Length = 283
Score = 27.5 bits (58), Expect = 8.8
Identities = 11/46 (23%), Positives = 26/46 (56%)
Frame = -1
Query: 286 VIKNNVIADVFVFTANISQLNYFIYFLFHFFQPLKVYIRSNIIMVY 149
++K + + F+FT + LN+ Y L+ F K+ + +++++Y
Sbjct: 3 LVKTSTVIFSFLFTQTVFYLNF--YLLYSIFVSKKLCRKPDLVLIY 46
>Z82057-2|CAD89759.1| 561|Caenorhabditis elegans Hypothetical
protein T26H8.4 protein.
Length = 561
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = -1
Query: 328 IQMFIVKRIH--IILGVIKNNVIADVFVFTANISQLNYFIYFLF 203
+Q+ VK H + K+ VI + +F A +S + +FI FLF
Sbjct: 398 VQLIFVKYPHGSWTISFSKSTVILQMSIFVAIVSSVAHFISFLF 441
>Z74476-6|CAA98967.1| 1139|Caenorhabditis elegans Hypothetical
protein F56H9.5 protein.
Length = 1139
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/96 (18%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Frame = +2
Query: 197 EVKQKINKVIQLADICR-KYENVGDNIV-FYDSENDVDSLDYEHLNRAMIDECKEYDKMD 370
E +QK++ VI+ D + + D ++ F + +D + +HL + ++D+ ++++
Sbjct: 26 EKRQKVSSVIRPVDFPGISTQQLCDILIRFAYNGTYIDDVFRDHLLKLVVDKSITWNQVI 85
Query: 371 KXLLKLNRAKVQTMCLKTEKGKLSKENIQLKHYIKK 478
++ ++ + CL+ E + +Q+K + K
Sbjct: 86 HSVINTKTDRIYSKCLQCELIREMVNYVQIKSFSDK 121
>Z74473-6|CAA98951.1| 1139|Caenorhabditis elegans Hypothetical
protein F56H9.5 protein.
Length = 1139
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/96 (18%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Frame = +2
Query: 197 EVKQKINKVIQLADICR-KYENVGDNIV-FYDSENDVDSLDYEHLNRAMIDECKEYDKMD 370
E +QK++ VI+ D + + D ++ F + +D + +HL + ++D+ ++++
Sbjct: 26 EKRQKVSSVIRPVDFPGISTQQLCDILIRFAYNGTYIDDVFRDHLLKLVVDKSITWNQVI 85
Query: 371 KXLLKLNRAKVQTMCLKTEKGKLSKENIQLKHYIKK 478
++ ++ + CL+ E + +Q+K + K
Sbjct: 86 HSVINTKTDRIYSKCLQCELIREMVNYVQIKSFSDK 121
>Z30973-4|CAA83220.3| 431|Caenorhabditis elegans Hypothetical
protein B0284.1 protein.
Length = 431
Score = 27.5 bits (58), Expect = 8.8
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 1/112 (0%)
Frame = +2
Query: 290 ENDVDSLDYE-HLNRAMIDECKEYDKMDKXLLKLNRAKVQTMCLKTEKGKLSKENIQLKH 466
EN VD + + + E KEYD+ + N K++ + +T + ++ KEN ++H
Sbjct: 146 ENVVDMKNKKAEAQEKLHSEKKEYDEKKLQKSEENALKIEDLHKQTAQLEIEKENNAIEH 205
Query: 467 YIKKYLTELALREKDRPHSVKIASGVQKLDANGKTLNRPVTCIEGALCNAVM 622
+ + E L + D+ +++ +A G +++ G L NAV+
Sbjct: 206 QNRIHGME-KLFKLDK-YNIHVAGGKDTRESHFIDAVNNTRSAGGELSNAVV 255
>U41991-8|AAA83348.2| 500|Caenorhabditis elegans Hypothetical
protein C42D4.2 protein.
Length = 500
Score = 27.5 bits (58), Expect = 8.8
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +2
Query: 242 CRKYEN-VGDNIVFYDSENDVDSLDYEHLNRAMIDECKEYDKMDKXLLKLNRAKVQTMCL 418
C KYE+ V D+ + + + +YE +N + KE K++ +K N ++ + +
Sbjct: 255 CTKYESLVYDH--YRNMGKALGFENYEEVNEKYRSDSKE-GKIEFDNVK-NATQIMLIQI 310
Query: 419 KTEKGKLSKENIQLKHYIKKY 481
+T K+ K+NI HY Y
Sbjct: 311 RTRVNKILKKNIPAYHYEYAY 331
>U20168-1|AAA66364.1| 1139|Caenorhabditis elegans Lin-25 protein
protein.
Length = 1139
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/96 (18%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Frame = +2
Query: 197 EVKQKINKVIQLADICR-KYENVGDNIV-FYDSENDVDSLDYEHLNRAMIDECKEYDKMD 370
E +QK++ VI+ D + + D ++ F + +D + +HL + ++D+ ++++
Sbjct: 26 EKRQKVSSVIRPVDFPGISTQQLCDILIRFAYNGTYIDDVFRDHLLKLVVDKSITWNQVI 85
Query: 371 KXLLKLNRAKVQTMCLKTEKGKLSKENIQLKHYIKK 478
++ ++ + CL+ E + +Q+K + K
Sbjct: 86 HSVINTKTDRIYSKCLQCELIREMVNYVQIKSFSDK 121
>AL034393-11|CAA22324.2| 2417|Caenorhabditis elegans Hypothetical
protein Y18D10A.13 protein.
Length = 2417
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 275 QCYRRRFRIYGKYQPTELLYLFFVSLLP 192
+ YR+ F I G + E LYLF V L P
Sbjct: 90 ETYRQIFEILGPNKLPECLYLFAVGLFP 117
>AJ250261-1|CAB59919.1| 2417|Caenorhabditis elegans hypothetical
protein protein.
Length = 2417
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -3
Query: 275 QCYRRRFRIYGKYQPTELLYLFFVSLLP 192
+ YR+ F I G + E LYLF V L P
Sbjct: 90 ETYRQIFEILGPNKLPECLYLFAVGLFP 117
>AF125971-5|AAD14765.1| 484|Caenorhabditis elegans Hypothetical
protein Y4C6B.2a protein.
Length = 484
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Frame = -1
Query: 385 FQQXLIHF-IVFFAFVNHCS---IQMFIVKRIHIILGVIKNNVIADVFVFTANISQLNYF 218
F + L+ F + F++ HC+ IQ + K H +I +I +F+F +S YF
Sbjct: 200 FSKTLMSFGTIMFSYGGHCAFPTIQHDMKKPHHFSRSIIIAFII--IFIFYLPVSMSGYF 257
Query: 217 IY 212
+Y
Sbjct: 258 VY 259
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,933,076
Number of Sequences: 27780
Number of extensions: 284425
Number of successful extensions: 1004
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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