Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_A16
(654 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0438 - 18200329-18200430,18201203-18201335,18201964-182020... 98 5e-21
10_08_1034 + 22461397-22461702,22462311-22462524,22464936-224649... 30 1.9
10_08_0985 - 22042801-22042963,22043019-22043138,22043261-220435... 30 1.9
12_01_0227 - 1718726-1721183,1721804-1721957,1722090-1722165,172... 29 3.2
11_01_0229 - 1771701-1774164,1774694-1774847,1774980-1775055,177... 29 3.2
07_03_0270 + 16094334-16094539,16095067-16095177,16095431-16095896 29 4.3
03_06_0060 + 31341233-31342009,31342752-31342871,31343401-313435... 29 4.3
09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,353... 28 7.5
07_03_1462 + 26716197-26716484,26716618-26716746,26716963-267170... 27 9.9
01_01_0558 + 4098383-4098510,4100462-4100572,4100765-4100853,410... 27 9.9
>07_03_0438 -
18200329-18200430,18201203-18201335,18201964-18202034,
18202377-18202466,18203200-18203288,18203886-18203961,
18204094-18204264
Length = 243
Score = 98.3 bits (234), Expect = 5e-21
Identities = 53/130 (40%), Positives = 73/130 (56%), Gaps = 3/130 (2%)
Frame = +3
Query: 219 LEQFVLLAKGAKGSA--CAELIKQVLEAPGVHVFGELLEMPNIKELESGPYATHLKTLNL 392
+EQF A SA A L+ + P + F ELL +P + +L YA+ L L L
Sbjct: 13 IEQFSAQAAALSSSAPQLAALVLEATSHPALFAFSELLSLPALSKLTGTQYASSLDVLRL 72
Query: 393 FAYGTYKDYIENKSDYLELTTVQCKKLQHLTIATLATQEKCIPYSVLLEELDIKNVRDLE 572
FAYGT KDY N + L Q +KL+ L++ TLA K +PY L++ELD+ NVR+LE
Sbjct: 73 FAYGTLKDYKSNSGNLPALLPDQVRKLKQLSVLTLAESTKVLPYDQLMQELDVSNVRELE 132
Query: 573 DLII-EAXYA 599
D +I E Y+
Sbjct: 133 DFLINECMYS 142
>10_08_1034 +
22461397-22461702,22462311-22462524,22464936-22464997,
22465035-22465381,22465495-22465591
Length = 341
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 483 SDAVISCTGLWLILNSPICSQCSPYMC 403
+DAV C+GL+ I N+P SQ + C
Sbjct: 74 ADAVHGCSGLFAIFNTPSSSQSQSHSC 100
>10_08_0985 -
22042801-22042963,22043019-22043138,22043261-22043562,
22044055-22044351,22044448-22044556,22044826-22045358,
22045446-22045644,22045741-22045865,22045937-22046020,
22046093-22046221,22046337-22046465,22046593-22046739,
22047106-22047346,22047859-22047980
Length = 899
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +3
Query: 360 PYATHLKTLNLFAYGTYKDYIENKSDYLELTT---VQCKKLQHLTIATLATQEKCIPYSV 530
P L+ NLF+ K Y +N +YL + + KK + +E+ IP V
Sbjct: 399 PGKEELRQKNLFSVSDCKMYWQNSGEYLAVQVDRYTKTKKSTYTGFELFRIKERDIPIEV 458
Query: 531 LLEELDIKN 557
L ELD KN
Sbjct: 459 L--ELDNKN 465
>12_01_0227 - 1718726-1721183,1721804-1721957,1722090-1722165,
1722327-1722485,1722552-1722662,1722791-1722841,
1722948-1723192,1723745-1725278
Length = 1595
Score = 29.1 bits (62), Expect = 3.2
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -1
Query: 543 IPQVTHCKGYISLVLQVLQWSDA 475
+P+VTHC + L+++ +W DA
Sbjct: 940 LPEVTHCNRLLKLLVEQRRWDDA 962
>11_01_0229 -
1771701-1774164,1774694-1774847,1774980-1775055,
1775439-1775477,1778516-1778674,1778741-1778851,
1779014-1779064,1779173-1779256
Length = 1045
Score = 29.1 bits (62), Expect = 3.2
Identities = 9/23 (39%), Positives = 16/23 (69%)
Frame = -1
Query: 543 IPQVTHCKGYISLVLQVLQWSDA 475
+P+VTHC + L+++ +W DA
Sbjct: 389 LPEVTHCNRLLKLLVEQRRWDDA 411
>07_03_0270 + 16094334-16094539,16095067-16095177,16095431-16095896
Length = 260
Score = 28.7 bits (61), Expect = 4.3
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = -1
Query: 480 DAVISCTGLWLILNSPICSQ 421
D +++CT WL + SP CSQ
Sbjct: 190 DMMMACTPSWLFIPSPACSQ 209
>03_06_0060 +
31341233-31342009,31342752-31342871,31343401-31343517,
31343615-31343704,31344279-31344386,31345124-31345306
Length = 464
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +3
Query: 177 DEPSSLLS-FSSNHPLEQFVLLAKGAKGSACAELIKQVLEAPGVHVFGELLEMP 335
D+ LLS +S HPL + L +GA G+A +K V GV++ + P
Sbjct: 391 DQSRELLSTLASMHPLSAYERLRRGALGTAVDADVKPVPARDGVNLMEKARPKP 444
>09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,
3536083-3536226,3536974-3537375,3537499-3537721,
3537830-3542368,3542480-3542599,3543005-3543038,
3543922-3544102,3544198-3544815,3545022-3551098,
3551139-3551304,3551508-3551614,3552056-3552178,
3553417-3553642
Length = 5100
Score = 27.9 bits (59), Expect = 7.5
Identities = 12/44 (27%), Positives = 24/44 (54%)
Frame = +3
Query: 174 RDEPSSLLSFSSNHPLEQFVLLAKGAKGSACAELIKQVLEAPGV 305
+DE S + +E FV +++ K S+C E +K+++ G+
Sbjct: 4492 KDETLSKNASMQRSAVENFVRVSESLKTSSCGERLKEIILEKGI 4535
>07_03_1462 +
26716197-26716484,26716618-26716746,26716963-26717055,
26717581-26717721,26718021-26718089,26718207-26718290,
26718784-26718964,26719055-26719171,26719245-26719303,
26719595-26719729,26719865-26720014,26720170-26720208
Length = 494
Score = 27.5 bits (58), Expect = 9.9
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +3
Query: 375 LKTLNLFAYGTYKDYIENKSDYLELTTVQCKKLQHLTIATLATQEKCIPYSVLLEELDIK 554
L++L G +KD IE +++ TVQ K + + A K I S+ L D +
Sbjct: 118 LESLRSRVAGKHKDEIEESLSMVDVLTVQLSKREDELLQQKAEVAK-IATSLKLASEDAR 176
Query: 555 NVRDLE--DLIIEAXYADIIHGKLDQECKRVEVD 650
+ + E + IE A K++Q K E+D
Sbjct: 177 RIVEEERSNARIEIDNARAAVQKVEQLVKEQEID 210
>01_01_0558 + 4098383-4098510,4100462-4100572,4100765-4100853,
4100974-4101107,4101337-4101435,4102619-4102994,
4103883-4104337,4104419-4107409
Length = 1460
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +3
Query: 435 DYLELTTVQC-KKLQHLTIATLATQEKCIP-YSVLLEELDIKNVR 563
D LELTT++C K L HLT T+ K + + L+EE + ++R
Sbjct: 1280 DCLELTTLKCMKTLIHLTELTVLRSPKFMEGWKNLVEEAEGSHLR 1324
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,160,421
Number of Sequences: 37544
Number of extensions: 304354
Number of successful extensions: 691
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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