Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_A13
         (512 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_02_0040 + 4482853-4482988,4483111-4483224,4485372-4485514          172   1e-43
03_02_0370 + 7853646-7853772,7854508-7854621,7855152-7855294          171   2e-43
06_01_0239 - 1819316-1819458,1820578-1820691,1820794-1820923          169   9e-43
03_02_0020 - 5045900-5046211,5046233-5046290,5046604-5047242,504...    53   2e-07
07_01_0344 - 2490700-2493249                                           30   0.95 
03_06_0314 - 33077621-33077869,33078218-33078280,33079392-330794...    30   0.95 
06_02_0345 + 14833838-14833997,14834095-14834552,14834633-148348...    29   2.9  

>10_02_0040 + 4482853-4482988,4483111-4483224,4485372-4485514
          Length = 130

 Score =  172 bits (419), Expect = 1e-43
 Identities = 80/121 (66%), Positives = 99/121 (81%)
 Frame = +2

Query: 107 AAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 286
           A   + G  +   +A    ++RIRITL+S+NV++LEKVCADL+ GAK ++LRVKGPVR+P
Sbjct: 9   AGGAMKGGKLGMEEARELQLNRIRITLSSKNVKNLEKVCADLVKGAKDKQLRVKGPVRIP 68

Query: 287 TKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIA 466
           TK+L ITTRK+PCGEG+ TWDRF+ RIHKRVIDL S  ++VKQITSI IEPGVEVEVTIA
Sbjct: 69  TKVLHITTRKSPCGEGTNTWDRFEFRIHKRVIDLISSPDVVKQITSITIEPGVEVEVTIA 128

Query: 467 D 469
           D
Sbjct: 129 D 129


>03_02_0370 + 7853646-7853772,7854508-7854621,7855152-7855294
          Length = 127

 Score =  171 bits (417), Expect = 2e-43
 Identities = 84/126 (66%), Positives = 102/126 (80%), Gaps = 4/126 (3%)
 Frame = +2

Query: 104 MAAAVV----SGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKG 271
           MAAA V     G  +   +A    ++RIRITL+S+NV++LEKVCADL+ GAK ++LRVKG
Sbjct: 1   MAAAAVYGGMKGGKLGVEEAHELQLNRIRITLSSKNVKNLEKVCADLVKGAKDKQLRVKG 60

Query: 272 PVRMPTKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEV 451
           PVR+PTK+L ITTRK+PCGEG+ TWDRF+ RIHKRVIDL S  ++VKQITSI IEPGVEV
Sbjct: 61  PVRIPTKVLHITTRKSPCGEGTNTWDRFEFRIHKRVIDLISSPDVVKQITSITIEPGVEV 120

Query: 452 EVTIAD 469
           EVTIAD
Sbjct: 121 EVTIAD 126


>06_01_0239 - 1819316-1819458,1820578-1820691,1820794-1820923
          Length = 128

 Score =  169 bits (412), Expect = 9e-43
 Identities = 81/121 (66%), Positives = 100/121 (82%)
 Frame = +2

Query: 107 AAAVVSGKDIEKPQAEVSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMP 286
           A  + SGK   +   EV   HRIRITL+S++V++LEKVC DL+ GAK + L+VKGPVRMP
Sbjct: 9   APPMKSGKIGFESSQEVQ--HRIRITLSSKSVKNLEKVCGDLVKGAKDKSLKVKGPVRMP 66

Query: 287 TKILRITTRKTPCGEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIA 466
           TK+L ITTRK+PCGEG+ TWDRF+MR+HKRVIDL S +++VKQITSI IEPGVEVEVTI+
Sbjct: 67  TKVLHITTRKSPCGEGTNTWDRFEMRVHKRVIDLVSSADVVKQITSITIEPGVEVEVTIS 126

Query: 467 D 469
           D
Sbjct: 127 D 127


>03_02_0020 -
           5045900-5046211,5046233-5046290,5046604-5047242,
           5048475-5048515,5048672-5048728,5048952-5049140
          Length = 431

 Score = 52.8 bits (121), Expect = 2e-07
 Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 1/104 (0%)
 Frame = +2

Query: 155 VSPIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRITTRKTPCGEG 334
           ++P  +IRI L S  V  +E  C  +I  AK    +  GPV +PTK        +P    
Sbjct: 329 LAPKQKIRIKLRSYWVPLIEDSCKKIIEAAKTTNAKTMGPVPLPTKRRVYCVLNSPHVHK 388

Query: 335 SKTWDRFQMRIHKRVIDLHSP-SEIVKQITSINIEPGVEVEVTI 463
              +  F++R H+R+ID+  P ++ +  +  + +  GV+VEV +
Sbjct: 389 DSRF-HFEIRTHQRLIDIMYPTAQTIDSLMQLQLPAGVDVEVKL 431


>07_01_0344 - 2490700-2493249
          Length = 849

 Score = 30.3 bits (65), Expect = 0.95
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -3

Query: 171 RWIGETSAWGFSMSLPDTTAAA 106
           RWIG++S   F++SLP T A A
Sbjct: 46  RWIGDSSPKNFTLSLPGTVATA 67


>03_06_0314 -
           33077621-33077869,33078218-33078280,33079392-33079449,
           33079534-33079688,33079797-33080106,33080634-33080890,
           33081280-33081359,33083888-33083948
          Length = 410

 Score = 30.3 bits (65), Expect = 0.95
 Identities = 12/27 (44%), Positives = 17/27 (62%)
 Frame = +1

Query: 199 CALAREGLC*PNQWSQETEAACKGPSP 279
           C LA EGL   ++W++   A  +GPSP
Sbjct: 155 CRLAAEGLVTASKWARPGRAGTRGPSP 181


>06_02_0345 +
           14833838-14833997,14834095-14834552,14834633-14834870,
           14834974-14835431,14836554-14836955
          Length = 571

 Score = 28.7 bits (61), Expect = 2.9
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
 Frame = +1

Query: 172 HQDHSYFTQCALAREGLC*PNQWSQETEAACKG--PSPH---ANQDPA 300
           H   S   +CAL R+G     +W  ET   C G  P+P     +QDPA
Sbjct: 11  HHLQSTLFECALLRDGRAESFEWLFETFKNCMGNCPTPRCILTDQDPA 58


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,984,767
Number of Sequences: 37544
Number of extensions: 312547
Number of successful extensions: 778
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 777
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1106928780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)