Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_A12
(653 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16818| Best HMM Match : Prefoldin (HMM E-Value=0.00051) 75 4e-14
SB_24029| Best HMM Match : Kinesin (HMM E-Value=2.10195e-44) 31 0.82
SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_57077| Best HMM Match : RhoGEF (HMM E-Value=2.1e-07) 30 1.4
SB_21209| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_38369| Best HMM Match : E-MAP-115 (HMM E-Value=1.7) 29 3.3
SB_7934| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_2066| Best HMM Match : Dynein_heavy (HMM E-Value=0) 28 5.8
SB_20986| Best HMM Match : RVT_1 (HMM E-Value=0.0048) 28 7.6
SB_16769| Best HMM Match : DUF1690 (HMM E-Value=0.17) 28 7.6
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 28 7.6
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 28 7.6
SB_10465| Best HMM Match : Fibrinogen_C (HMM E-Value=0) 28 7.6
SB_7704| Best HMM Match : DivIVA (HMM E-Value=9.6) 28 7.6
>SB_16818| Best HMM Match : Prefoldin (HMM E-Value=0.00051)
Length = 162
Score = 75.4 bits (177), Expect = 4e-14
Identities = 34/88 (38%), Positives = 61/88 (69%)
Frame = +1
Query: 217 KSYSGIPEAEFVDNVDEFMKSPINAEGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQI 396
K + GIPEA F+D+V +FM S +++ + V++S DE+ RKYK ME L TK+++L+ Q+
Sbjct: 16 KKHRGIPEAGFLDDVGKFM-STSSSDSAESVIRSFDEQLRKYKFMEINLLTKKKKLQGQV 74
Query: 397 PDLARTIEVIEKLKEQKEEVETQFLLSD 480
PDL ++E+++ L+ +K V ++ + +
Sbjct: 75 PDLKSSLEMVKLLQAKKANVMLEYSIDE 102
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/38 (57%), Positives = 32/38 (84%)
Frame = +1
Query: 538 ANVMLEYSLEDAEKLLTTNMETAQENLNQVEHDLDFLR 651
ANVMLEYS+++AE+LL N++TA ++L ++E DL FLR
Sbjct: 92 ANVMLEYSIDEAEELLQKNLKTAIKSLEELEDDLGFLR 129
>SB_24029| Best HMM Match : Kinesin (HMM E-Value=2.10195e-44)
Length = 534
Score = 31.1 bits (67), Expect = 0.82
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 1/110 (0%)
Frame = +1
Query: 289 AEGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQF 468
AE VD V ++++ K ++ L +++RL+ + D K KEE+E Q
Sbjct: 372 AEEVDRVKMEIEQE--KAELQLSALENEKKRLKADLDD---------SYKRHKEEMEIQQ 420
Query: 469 LLSDQVFVK-ANVPPTKSVCLWLGANVMLEYSLEDAEKLLTTNMETAQEN 615
L Q F V + + +LE +++DA L T N E QEN
Sbjct: 421 LQHFQTFRNYREVFEDQKSAIEQRYRTLLEEAIQDAVFLSTRNQELLQEN 470
>SB_49860| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/60 (28%), Positives = 37/60 (61%), Gaps = 5/60 (8%)
Frame = +1
Query: 307 VLKSLDEKHRKY----KVMEYTLATKRRRLRQQIPDLA-RTIEVIEKLKEQKEEVETQFL 471
+L+ ++EK RK ++ E K+ +L QQ +L + ++ ++++KE+K+E+E + L
Sbjct: 287 MLRQIEEKKRKLEEEERIKEEVEKQKKIKLEQQEKELRDKLLKNLKEMKERKQELERELL 346
>SB_57077| Best HMM Match : RhoGEF (HMM E-Value=2.1e-07)
Length = 658
Score = 30.3 bits (65), Expect = 1.4
Identities = 25/102 (24%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Frame = +1
Query: 199 VEPSNPKS-YSGIPEAEFVDNVDEFMKSPINAEGVDVVLKSLDEKHRKYKV-MEYTLATK 372
++ NPK+ +SG E+ F+ + ++ P+ +LK LDE +YKV +E +A +
Sbjct: 127 LDARNPKNQHSGTLESYFIKPIQRILRYPLLLR---TILKLLDETSEEYKVLLEAVVAIE 183
Query: 373 RRRLRQQIPDLARTIE----VIEKLKEQKEEVETQFLLSDQV 486
++ I ++ R E + +L E ++ E + D++
Sbjct: 184 --KVATHINEMQRITERFAPIFNQLVEDYDDCEVSDVTIDRL 223
>SB_21209| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 390
Score = 29.5 bits (63), Expect = 2.5
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Frame = +1
Query: 262 DEFMKSPINAEGVDVVLKSLDEKHRKYKVMEYTL-ATKRRRLRQQIPDLARTIEVIEKLK 438
D ++S + + + + KHR K + + A +++ +++P + +E+ EKLK
Sbjct: 234 DSILQSKVEKDQLLMDTLETIAKHRADKSRQAAVRAEQKKASEKKLPKDPKLLELQEKLK 293
Query: 439 EQKEE--VETQFL 471
+KEE +ETQ L
Sbjct: 294 AKKEERRIETQRL 306
>SB_38369| Best HMM Match : E-MAP-115 (HMM E-Value=1.7)
Length = 412
Score = 29.1 bits (62), Expect = 3.3
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Frame = +1
Query: 205 PSNPKSYSGIPEAEFVDN-----VDEFMKSPINAEGVD-------VVLKSLDEKHRKYKV 348
PS+ K+ S + E E + N V+EF+K D V+L+ + + + +V
Sbjct: 248 PSSTKTTSDLEEGEILKNEDRKWVEEFLKGIAPTSNTDQHATETKVMLQETERRLGEKEV 307
Query: 349 MEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVE 459
E T KRR+ +Q+ + +EK +K ++
Sbjct: 308 QELTEKWKRRKRKQEWLKRRKIKRTLEKQAAEKRRLQ 344
>SB_7934| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 129
Score = 28.3 bits (60), Expect = 5.8
Identities = 24/108 (22%), Positives = 48/108 (44%)
Frame = -1
Query: 575 SASSRLYSNITLAPSHKHTDFVGGTLAFTNT*SLRRNCVSTSSFCSFNFSITSIVRAKSG 396
S S+ +SN T+A S+ + GT+ + + N S+C+ S ++ A+S
Sbjct: 1 SYSTSTHSNGTVAQSYSTSTHSNGTVTQSYSTITHSNGTVAQSYCTSTHSHGTV--AQSY 58
Query: 395 ICCRNRLLLVANVYSITLYLRCFSSRLFKTTSTPSALIGDFINSSTLS 252
+ VA YS + + C ++ + T++ + ++ST S
Sbjct: 59 STSTHSHGTVAQSYSPSTHFHCTVAQSYSTSTHSHGTVAQSYSTSTHS 106
>SB_2066| Best HMM Match : Dynein_heavy (HMM E-Value=0)
Length = 1256
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/65 (26%), Positives = 29/65 (44%)
Frame = +1
Query: 307 VLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVETQFLLSDQV 486
+L+ + RK K +E L + + + D IEV+ K EEV + L++
Sbjct: 384 LLEDVSSNKRKMKELEDNLLYRLTSTQGSLVDDESLIEVLSVTKTTAEEVSQKLLVAADT 443
Query: 487 FVKAN 501
+K N
Sbjct: 444 EIKIN 448
>SB_20986| Best HMM Match : RVT_1 (HMM E-Value=0.0048)
Length = 247
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/67 (26%), Positives = 29/67 (43%)
Frame = +1
Query: 268 FMKSPINAEGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQK 447
F + P AE +L + H + E T K R + +L +T +++LKE +
Sbjct: 96 FARVPFGAEASPFMLGATIHHHLDRQPTELTNTDKALRENTYVDNLMQTGNDVDELKEFR 155
Query: 448 EEVETQF 468
EE F
Sbjct: 156 EEATRIF 162
>SB_16769| Best HMM Match : DUF1690 (HMM E-Value=0.17)
Length = 837
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 337 KYKVMEYTLATKRRRLRQQIPDLARTIEVIEKLKEQKEEVE 459
KY + +A KR L+Q +LA T V++ K + EVE
Sbjct: 315 KYHFVAKGVAPKRAALQQATEELAETQRVLDAAKARLTEVE 355
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 27.9 bits (59), Expect = 7.6
Identities = 25/118 (21%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Frame = +1
Query: 325 EKHRKYKVMEYTLATKRRRLRQQIPDLARTIEV----IEKLKEQKEEVETQF----LLSD 480
++ KY+ YT ++ L QQ +L +EV E+L+ ++ + L+
Sbjct: 4204 QERDKYQTANYTYNREKEELAQQNAELKMKLEVKVNECEELERTTSDLSKKLSQAELIVQ 4263
Query: 481 QVFVKANVPPTKSVCLWLGANV-MLEYSLEDAEKLLTTNMETAQENLNQVEHDLDFLR 651
Q+ ++++ P +++ L L+ L+ +K L + A+E L + +L+ L+
Sbjct: 4264 QLSIESDAPAAQTLVQQLQQEKDDLKSKLDQLKKTLQKSEANAEEALQRRTDELEKLQ 4321
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/83 (24%), Positives = 39/83 (46%)
Frame = +1
Query: 238 EAEFVDNVDEFMKSPINAEGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQQIPDLARTI 417
EAE + +EF ++ E + + SL+ + + YK Y L T+ L ++ L
Sbjct: 2041 EAELSNIKEEFTENKTGVETTEKKVVSLESEIKDYKQSIYRLGTEVESLARERDSLT--- 2097
Query: 418 EVIEKLKEQKEEVETQFLLSDQV 486
E I+ + ++E ++L S +
Sbjct: 2098 EEIKSKDLRLGDIEKKYLKSQNI 2120
>SB_10465| Best HMM Match : Fibrinogen_C (HMM E-Value=0)
Length = 352
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = -3
Query: 306 YIDSFSIDR*FHKFVYIIYKFSFWYSRI-RLRVRGFY 199
YID+ +R F K + YK ++WY R + GFY
Sbjct: 129 YIDNDEREREFIKSCAVQYKGAWWYKNCHRANLNGFY 165
>SB_7704| Best HMM Match : DivIVA (HMM E-Value=9.6)
Length = 163
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/59 (28%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +1
Query: 217 KSYSGIP-EAEFVDNVDEFMKSPINAEGVDVVLKSLDEKHRKYKVMEYTLATKRRRLRQ 390
K+ +G P E + +D +DE I A ++ K+L+++ + K + T+ T+RR+ R+
Sbjct: 3 KAGTGPPLEVDGIDKLDENEFLKIQASRLEDQTKALEQEVQTLKKIIQTIETRRRKNRR 61
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,428,629
Number of Sequences: 59808
Number of extensions: 272607
Number of successful extensions: 827
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 823
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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