Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P05_F_A10
(402 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40594| Best HMM Match : Extensin_2 (HMM E-Value=0.083) 110 5e-25
SB_10357| Best HMM Match : zf-C2H2 (HMM E-Value=9.8e-38) 36 0.012
SB_34562| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.087
SB_45463| Best HMM Match : zf-C2H2 (HMM E-Value=0) 31 0.46
SB_39159| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.61
SB_55441| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.61
SB_16971| Best HMM Match : zf-C2H2 (HMM E-Value=5.8e-36) 30 0.81
SB_44730| Best HMM Match : zf-C2H2 (HMM E-Value=0) 30 0.81
SB_50183| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 1.1
SB_42899| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.1
SB_34420| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.1
SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 1.1
SB_15809| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 1.4
SB_11426| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.4
SB_27848| Best HMM Match : zf-C2H2 (HMM E-Value=1.49995e-41) 29 1.9
SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0) 29 1.9
SB_13281| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.5
SB_56660| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 3.3
SB_23259| Best HMM Match : zf-C2H2 (HMM E-Value=0) 28 3.3
SB_51905| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 4.3
SB_37930| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.3
SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.3
SB_32609| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 4.3
SB_11362| Best HMM Match : zf-C2H2 (HMM E-Value=7.9e-32) 27 4.3
SB_32644| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 5.7
SB_21010| Best HMM Match : PHD (HMM E-Value=7e-10) 27 5.7
SB_14666| Best HMM Match : NHL (HMM E-Value=4.5) 27 5.7
SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 5.7
SB_46756| Best HMM Match : zf-C2H2 (HMM E-Value=4.60046e-42) 27 5.7
SB_40339| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 5.7
SB_37978| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 5.7
SB_34111| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 5.7
SB_8757| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 5.7
SB_43276| Best HMM Match : zf-C2H2 (HMM E-Value=0) 27 7.6
SB_32903| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_8854| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_3588| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_57933| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 7.6
SB_52567| Best HMM Match : zf-C2H2 (HMM E-Value=0) 26 10.0
SB_9634| Best HMM Match : zf-C2H2 (HMM E-Value=0) 26 10.0
SB_2814| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 10.0
SB_27651| Best HMM Match : zf-C2H2 (HMM E-Value=0) 26 10.0
SB_22641| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 10.0
SB_11871| Best HMM Match : zf-C2H2 (HMM E-Value=1.3e-13) 26 10.0
SB_5864| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 10.0
SB_2816| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 10.0
>SB_40594| Best HMM Match : Extensin_2 (HMM E-Value=0.083)
Length = 440
Score = 110 bits (264), Expect = 5e-25
Identities = 48/74 (64%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Frame = +1
Query: 181 VGRRRRHP-NLGAGIVTXXFDDEKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHKE 357
+GR+++ P FDDEKILIQHQKAKHFKC ICHKKLYTGPGL+IHC QVHKE
Sbjct: 1 MGRKKKKPMKPWCWYCNRDFDDEKILIQHQKAKHFKCMICHKKLYTGPGLAIHCTQVHKE 60
Query: 358 AIDXVPNSLPNRSN 399
+ +PNSLPNR +
Sbjct: 61 TVSAIPNSLPNRGD 74
Score = 44.0 bits (99), Expect = 5e-05
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +3
Query: 177 MGRKKKKASKPWCWYCN 227
MGRKKKK KPWCWYCN
Sbjct: 1 MGRKKKKPMKPWCWYCN 17
>SB_10357| Best HMM Match : zf-C2H2 (HMM E-Value=9.8e-38)
Length = 509
Score = 35.9 bits (79), Expect = 0.012
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 262 HQKAKHFKCHICHKKLYTGPGLSIHCMQVH 351
H K K FKCHICH++ ++ H M++H
Sbjct: 421 HSKEKPFKCHICHRRFAQSSSVTTH-MRIH 449
>SB_34562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 978
Score = 33.1 bits (72), Expect = 0.087
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +1
Query: 241 DEKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHKEAIDXVPNSLPNRSN 399
D I + H + K FKC CHK + H + H +A P+S ++S+
Sbjct: 286 DLHIKVVHNRVKAFKCEHCHKVFGHSFDRARHVKKFHSDAKPVTPSSQSDQSH 338
>SB_45463| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 347
Score = 30.7 bits (66), Expect = 0.46
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 256 IQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHKE 357
+ H K FKCHIC K + L+ H M H E
Sbjct: 276 LTHTGEKPFKCHICGKAFHQVYNLTFH-MHTHNE 308
>SB_39159| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 728
Score = 30.3 bits (65), Expect = 0.61
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +1
Query: 262 HQKAKHFKCHICHKKLYTGPGLSIHCMQVHKE 357
H+K K +KC +C K LS H VH++
Sbjct: 658 HKKEKPYKCDVCKKIFGLSSSLSRHIRTVHQD 689
>SB_55441| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 694
Score = 30.3 bits (65), Expect = 0.61
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 262 HQKAKHFKCHICHKKLYTGPGLSIHCMQVHKE 357
H + +KC IC KK GLSIH ++H E
Sbjct: 483 HTDERPYKCDICGKKFRQQGGLSIH-KKIHTE 513
Score = 27.1 bits (57), Expect = 5.7
Identities = 11/30 (36%), Positives = 16/30 (53%)
Frame = +1
Query: 262 HQKAKHFKCHICHKKLYTGPGLSIHCMQVH 351
H K ++C IC K L+IH M++H
Sbjct: 539 HSGEKPYRCEICEKSFRDKDSLNIH-MRIH 567
>SB_16971| Best HMM Match : zf-C2H2 (HMM E-Value=5.8e-36)
Length = 477
Score = 29.9 bits (64), Expect = 0.81
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 250 ILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVH 351
+L H+K + +CH+C K+ L+ H M+VH
Sbjct: 294 VLHVHEKHRPHECHVCQKRFSQSSSLNKH-MRVH 326
>SB_44730| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1346
Score = 29.9 bits (64), Expect = 0.81
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = +1
Query: 253 LIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHK 354
++ H + + F C C K L HCM VH+
Sbjct: 1188 IVTHSEQRPFSCEQCMKSFNRSGDLRRHCMTVHE 1221
>SB_50183| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 717
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +1
Query: 253 LIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVH 351
L++H K FKC C K ++ L IH ++VH
Sbjct: 508 LLKHTGEKKFKCAHCPKTFFSSSSLKIH-VRVH 539
>SB_42899| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 490
Score = 29.5 bits (63), Expect = 1.1
Identities = 12/34 (35%), Positives = 20/34 (58%)
Frame = +1
Query: 250 ILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVH 351
+L H+K + +CH+C K+ L+ H M+VH
Sbjct: 305 VLHVHEKHRPHECHVCKKRFSQSSSLNKH-MRVH 337
>SB_34420| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 544
Score = 29.5 bits (63), Expect = 1.1
Identities = 19/45 (42%), Positives = 19/45 (42%), Gaps = 5/45 (11%)
Frame = +1
Query: 235 FDDEKILIQHQKAKH-----FKCHICHKKLYTGPGLSIHCMQVHK 354
FD L HQK H FKC C K LY L H VHK
Sbjct: 296 FDSYNQLHNHQKTIHGGKNPFKCGHCGKCLYNESYLKEHIRGVHK 340
>SB_38457| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 4303
Score = 29.5 bits (63), Expect = 1.1
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 262 HQKAKHFKCHICHKKLYTGPGLSIHCMQVHKE 357
H+ K KC+ C KK++T G+ H QVH +
Sbjct: 521 HRDEKLVKCNYC-KKIFTKYGMKEHIEQVHNK 551
Score = 27.9 bits (59), Expect = 3.3
Identities = 8/31 (25%), Positives = 19/31 (61%)
Frame = +1
Query: 262 HQKAKHFKCHICHKKLYTGPGLSIHCMQVHK 354
H++++ ++C C L + L++H ++HK
Sbjct: 2391 HERSRPYRCEYCGWHLASKSNLTLHIKRIHK 2421
Score = 26.6 bits (56), Expect = 7.6
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = +1
Query: 244 EKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHKE 357
E + + H+K K + C C K+ T L H H +
Sbjct: 459 EHVKVSHEKVKIYVCDHCDKEFETSCQLGSHKKVAHDQ 496
>SB_15809| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 935
Score = 29.1 bits (62), Expect = 1.4
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +1
Query: 262 HQKAKHFKCHICHKKLYTGPGLSIHCMQVHKE 357
H K F+C +CHK LS H VH++
Sbjct: 478 HTGEKPFECPVCHKAFSQTGNLSKHVRYVHEK 509
>SB_11426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 522
Score = 29.1 bits (62), Expect = 1.4
Identities = 16/60 (26%), Positives = 24/60 (40%)
Frame = +1
Query: 223 VTXXFDDEKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHKEAIDXVPNSLPNRSNI 402
+ DDEK +H K F C C+K + H VHKE+ N + ++
Sbjct: 289 IQTTHDDEKPE-RHTTEKLFDCCYCNKNFTAARSVRRHIRAVHKESRSSPENKKSEKKSL 347
>SB_27848| Best HMM Match : zf-C2H2 (HMM E-Value=1.49995e-41)
Length = 257
Score = 28.7 bits (61), Expect = 1.9
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +1
Query: 253 LIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHKE 357
+I H K F+C++C K LS H M +H +
Sbjct: 138 MIVHSNRKPFQCNVCEKAFKRSSTLSTH-MLIHSD 171
>SB_57| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1498
Score = 28.7 bits (61), Expect = 1.9
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +1
Query: 235 FDDEKILIQHQKA----KHFKCHICHKKLYTGPGLSIHCMQVHKEA 360
F L++HQ++ + F C +C K L T L H M HK++
Sbjct: 1185 FSTHVYLVEHQESVLGEREFTCEVCDKSLLTRAHLKRHTMN-HKKS 1229
>SB_13281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 477
Score = 28.3 bits (60), Expect = 2.5
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +1
Query: 265 QKAKHFKCHICHKKLYTGPGLSIHCMQVHKE 357
Q + F CH+C++ L IH + VH++
Sbjct: 331 QGDRKFPCHLCNRSFEKRDRLRIHILHVHEK 361
>SB_56660| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 917
Score = 27.9 bits (59), Expect = 3.3
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 253 LIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVH 351
L+ H K FKC +C K GL H +++H
Sbjct: 469 LMMHSGQKPFKCDVCDKGFTRHAGLKSH-LRIH 500
>SB_23259| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1449
Score = 27.9 bits (59), Expect = 3.3
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +1
Query: 250 ILIQHQKAKHFKCHICHKKLYTGPGLSIH 336
+ + H + F+C ICHK + L+ H
Sbjct: 989 VRVHHTHERPFQCQICHKSFHMAGDLTKH 1017
>SB_51905| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 928
Score = 27.5 bits (58), Expect = 4.3
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = +1
Query: 262 HQKAKHFKCHICHKKLYTGPGLSIHCMQVH 351
H AK FKC C K + L+ H VH
Sbjct: 866 HSGAKPFKCDTCEKAFRSSSELTRHVKLVH 895
>SB_37930| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 707
Score = 27.5 bits (58), Expect = 4.3
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +1
Query: 238 DDEKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVH 351
D + ++ H K K F C C+K T L +H ++VH
Sbjct: 115 DLRRHMLTHTKEKPFACSTCNKAFATKQTLIVH-IRVH 151
>SB_16305| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1122
Score = 27.5 bits (58), Expect = 4.3
Identities = 18/52 (34%), Positives = 26/52 (50%)
Frame = +1
Query: 247 KILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHKEAIDXVPNSLPNRSNI 402
K + H+ K ++C C K LSIH + HKE VP P+RS++
Sbjct: 917 KHMRSHKDFKPYRCDKCDKSFNQSRLLSIHSL-THKEK-KTVPK--PSRSSV 964
>SB_32609| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 1741
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/21 (52%), Positives = 13/21 (61%)
Frame = +1
Query: 274 KHFKCHICHKKLYTGPGLSIH 336
K FKC IC K+ T GL+ H
Sbjct: 1303 KLFKCDICEKEFKTHVGLNFH 1323
>SB_11362| Best HMM Match : zf-C2H2 (HMM E-Value=7.9e-32)
Length = 382
Score = 27.5 bits (58), Expect = 4.3
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +1
Query: 247 KILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHK 354
KI + + ++CH+C + G GL+ H HK
Sbjct: 324 KITHEGGELAKYECHLCGARYTRGTGLTSHLKAKHK 359
>SB_32644| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 365
Score = 27.1 bits (57), Expect = 5.7
Identities = 11/38 (28%), Positives = 18/38 (47%)
Frame = +1
Query: 238 DDEKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVH 351
D +K+ ++ + F C C K T GL +H + H
Sbjct: 182 DRKKLKLESESQDTFDCMSCKKVFSTPHGLEVHVRRSH 219
>SB_21010| Best HMM Match : PHD (HMM E-Value=7e-10)
Length = 389
Score = 27.1 bits (57), Expect = 5.7
Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = +1
Query: 193 RRHPNLGAGIVTXXFDDEKI--LIQHQKAKHFKCHICHKKLYTGPGLSIH 336
R P ++ E++ + + K + C IC ++ GPGL H
Sbjct: 170 RPSPLFSGSMIVRNITKEELARMTPEDRKKPYVCEICGRRYKNGPGLKYH 219
>SB_14666| Best HMM Match : NHL (HMM E-Value=4.5)
Length = 151
Score = 27.1 bits (57), Expect = 5.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 263 IRKRSILNVTFVTKSCTQDLDCPYTACRYIKKP*TKY 373
IR+ +++++TF + S +L P+ CR K P T Y
Sbjct: 27 IRQVTVVDLTFTSDSEECNLKSPFGICRSHKDPYTLY 63
>SB_1799| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 907
Score = 27.1 bits (57), Expect = 5.7
Identities = 9/32 (28%), Positives = 14/32 (43%)
Frame = +1
Query: 262 HQKAKHFKCHICHKKLYTGPGLSIHCMQVHKE 357
H + F+C +C K L HC + H +
Sbjct: 258 HTNERLFQCDLCEKAFIDRADLRRHCQRTHSD 289
>SB_46756| Best HMM Match : zf-C2H2 (HMM E-Value=4.60046e-42)
Length = 1078
Score = 27.1 bits (57), Expect = 5.7
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 253 LIQHQKAKHFKCHICH 300
+++H K F+CHICH
Sbjct: 361 VLKHPNYKAFECHICH 376
>SB_40339| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 251
Score = 27.1 bits (57), Expect = 5.7
Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 6/45 (13%)
Frame = +2
Query: 257 SNIRKRSILNVTFVTKSCTQDLDC---PYTACRYI---KKP*TKY 373
SN+ R+I V+ + KSCT + C P T RY+ K P T Y
Sbjct: 3 SNLAGRTIEEVSEIIKSCTDRVICTVKPSTDFRYVDTHKTPDTDY 47
>SB_37978| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 487
Score = 27.1 bits (57), Expect = 5.7
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 259 QHQKAKHFKCHICHKKLYTGPGLSIHCMQVHK 354
Q++K K FKC C K L H M +HK
Sbjct: 284 QNEKLKKFKCPTCDKAFIRNYTLQCH-MLIHK 314
>SB_34111| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 757
Score = 27.1 bits (57), Expect = 5.7
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +1
Query: 253 LIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHKE 357
+++H K F C +C ++ L++H +VH E
Sbjct: 545 MMRHDGVKPFSCPLCTQRFVNQSALNVH-QKVHSE 578
>SB_8757| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 539
Score = 27.1 bits (57), Expect = 5.7
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +1
Query: 259 QHQKAKHFKCHICHKKLYTGPGLSIH 336
+H KHFKC C+K+ + H
Sbjct: 262 RHSNEKHFKCSYCNKRFVESGDMRKH 287
>SB_43276| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 426
Score = 26.6 bits (56), Expect = 7.6
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 253 LIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVH 351
L+ H K +KC +C K GL H +++H
Sbjct: 282 LMMHSGQKPYKCDVCDKGFTRHAGLKSH-LRIH 313
>SB_32903| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 765
Score = 26.6 bits (56), Expect = 7.6
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = +1
Query: 262 HQKAKHFKCHICHKKLYTGPGLSIHCMQVH 351
H + ++F C IC+K + L H VH
Sbjct: 410 HVEERNFPCEICNKAYTSDANLKAHKRSVH 439
>SB_8854| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 339
Score = 26.6 bits (56), Expect = 7.6
Identities = 12/44 (27%), Positives = 18/44 (40%)
Frame = +1
Query: 253 LIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHKEAIDXVPNSL 384
++ H K +KC IC+ K + L H H D N +
Sbjct: 270 ILTHTGEKPYKCSICNWKFISSSNLRTHIRIHHSYFTDKAGNQV 313
>SB_3588| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 391
Score = 26.6 bits (56), Expect = 7.6
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 253 LIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVH 351
L+ H K +KC +C K GL H +++H
Sbjct: 247 LMMHSGQKPYKCDVCDKGFTRHAGLKSH-LRIH 278
>SB_57933| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 26.6 bits (56), Expect = 7.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 392 LFGSEFGTXSMASLCTCMQCMDSPGPVYSF 303
++G+E T +M C C++ GPVY F
Sbjct: 123 IYGAERCTPNMHLSCLLGDCVNDYGPVYGF 152
>SB_52567| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 370
Score = 26.2 bits (55), Expect = 10.0
Identities = 10/27 (37%), Positives = 12/27 (44%)
Frame = +1
Query: 262 HQKAKHFKCHICHKKLYTGPGLSIHCM 342
H K F CHIC K + L H +
Sbjct: 282 HSTVKEFVCHICEKGFHQKGNLRNHLL 308
>SB_9634| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 587
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 256 IQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHKE 357
++H KAK C IC K L+ H + H E
Sbjct: 552 LKHSKAKTHYCAICDKYYGQKSNLNTHNKKFHSE 585
>SB_2814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 896
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +1
Query: 235 FDDEKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVH 351
FD ++ + H K FKC C K L H +VH
Sbjct: 802 FDLKRHIRTHTGIKPFKCDRCDKAFTQRCSLEAHLTRVH 840
>SB_27651| Best HMM Match : zf-C2H2 (HMM E-Value=0)
Length = 280
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +1
Query: 265 QKAKHFKCHICHKKLYTGPGLSIHCMQVHKE 357
+K +FKC +C K GL H M+ H E
Sbjct: 84 KKPDNFKCELCEKSFGYSAGLRQH-MKYHTE 113
>SB_22641| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 26.2 bits (55), Expect = 10.0
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 248 RFSSNIRKRSILNVTFVTKSCTQDLDCPYTACRYIKK 358
R SN K+S N FVTK ++ P+ C+ IKK
Sbjct: 44 RLESN--KKSNENKLFVTKKPNPTINVPWRYCKGIKK 78
>SB_11871| Best HMM Match : zf-C2H2 (HMM E-Value=1.3e-13)
Length = 774
Score = 26.2 bits (55), Expect = 10.0
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +1
Query: 244 EKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVHK 354
++ L H K K CH+C K L+ H +++HK
Sbjct: 704 QRHLRTHTKEKAHTCHVCGKAFGRSDHLTKH-LRIHK 739
>SB_5864| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 26.2 bits (55), Expect = 10.0
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = +1
Query: 262 HQKAKHFKCHICHKKLYTGPGLSIHCMQVHKE 357
HQ+ CH+C K+ T L +H M+ H +
Sbjct: 152 HQERNPNHCHLCEKEFDTPSKLKVH-MRKHTQ 182
>SB_2816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 503
Score = 26.2 bits (55), Expect = 10.0
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +1
Query: 235 FDDEKILIQHQKAKHFKCHICHKKLYTGPGLSIHCMQVH 351
FD ++ + H K FKC C K L H +VH
Sbjct: 406 FDLKRHIRTHTGIKPFKCDRCDKAFTQRCSLEAHLTRVH 444
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,626,034
Number of Sequences: 59808
Number of extensions: 172664
Number of successful extensions: 620
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 620
length of database: 16,821,457
effective HSP length: 75
effective length of database: 12,335,857
effective search space used: 715479706
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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