Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P05_F_A04
         (651 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.          23   3.4  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    23   3.4  
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               22   4.5  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   7.8  

>AY656663-1|AAT68000.1|  148|Apis mellifera pteropsin protein.
          Length = 148

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = -1

Query: 297 FCLFLGLIQFFSDIVSAYLAVVL 229
           F   LGLI     IVS+Y A+VL
Sbjct: 68  FLFVLGLIVPVFTIVSSYAAIVL 90


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 9/43 (20%), Positives = 20/43 (46%)
 Frame = +3

Query: 423 THDLEFAQIEIQVLDGLKTGNVALKKVHDILNIDEIEKIMEES 551
           +H L +  +E  +    +  N+  + + DI N     K+M ++
Sbjct: 273 SHSLYYVNMEPFMKSQYEENNIEYEGIQDIFNTQSSAKVMSKN 315


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/35 (22%), Positives = 22/35 (62%)
 Frame = +3

Query: 471 LKTGNVALKKVHDILNIDEIEKIMEESREGIDKQR 575
           ++  ++ L    + LN+D+I+ ++E+  E + ++R
Sbjct: 19  VRCDDITLCLKQENLNLDDIDSLLEDESERMLRKR 53


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 11/34 (32%), Positives = 14/34 (41%)
 Frame = +3

Query: 462 LDGLKTGNVALKKVHDILNIDEIEKIMEESREGI 563
           LD L+TG ++  K      I          REGI
Sbjct: 474 LDALRTGTISANKASKAFGIPSSTLYKIARREGI 507


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,377
Number of Sequences: 438
Number of extensions: 2286
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)