Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_P20
         (652 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73422-1|CAA97764.1|  160|Caenorhabditis elegans Hypothetical pr...   108   3e-24
Z37139-6|CAB63431.2|  591|Caenorhabditis elegans Hypothetical pr...    33   0.18 
Z83229-3|CAB05740.3|  369|Caenorhabditis elegans Hypothetical pr...    29   3.8  
U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical p...    29   3.8  
Z78418-2|CAB01695.1|  817|Caenorhabditis elegans Hypothetical pr...    28   5.0  
U56963-11|AAB38127.1|  342|Caenorhabditis elegans Serpentine rec...    27   8.7  

>Z73422-1|CAA97764.1|  160|Caenorhabditis elegans Hypothetical
           protein B0564.2 protein.
          Length = 160

 Score =  108 bits (260), Expect = 3e-24
 Identities = 59/128 (46%), Positives = 77/128 (60%), Gaps = 2/128 (1%)
 Frame = +3

Query: 261 NIEDHIVIKAEPTAYYISKFITEAEEQLILSNIYAAPKPKWTQLSNRXLQNWGGVPHNKG 440
           NI+  IV  A  T  YI  +I E EE L  S I  AP+PKW  L+NR LQN+GGV     
Sbjct: 10  NIKKFIVKSAPATMIYIPNWIDEEEENLYKSCIENAPQPKWRVLANRRLQNYGGVVGKTA 69

Query: 441 MI-AETIPTWLDLYLERIHKLNVMCGRRP-NHVLVNEYTPGQGIMPHLDGNLFYPTITTI 614
           +I  +  P  L   + +I+ L +   + P NHVLVNEY  GQGIMPH DG  F+  +TT+
Sbjct: 70  LIPTDDFPVELKYLMTKINDLGIF--KNPVNHVLVNEYEAGQGIMPHTDGPAFHRIVTTV 127

Query: 615 SVGSHIVL 638
           ++GSH +L
Sbjct: 128 TLGSHCLL 135


>Z37139-6|CAB63431.2|  591|Caenorhabditis elegans Hypothetical
           protein C14B1.10 protein.
          Length = 591

 Score = 33.1 bits (72), Expect = 0.18
 Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = +3

Query: 447 AETIPTWLDLYLERIHKLNVMCGRRPNHVLVNEYTPGQGIMPHLD-GNLFYPTITTISVG 623
           A+ IP  ++  ++R+     +   RP+ V  N Y  G GI  H D  + F   I +IS+ 
Sbjct: 194 ADPIPPVINSLIDRLISDKYIT-ERPDQVTANVYESGHGIPSHYDTHSAFDDPIVSISLL 252

Query: 624 SHIVLKF 644
           S +V++F
Sbjct: 253 SDVVMEF 259


>Z83229-3|CAB05740.3|  369|Caenorhabditis elegans Hypothetical
           protein F54F11.3 protein.
          Length = 369

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 17/43 (39%), Positives = 21/43 (48%)
 Frame = -1

Query: 445 IIPLLCGTPPQFCNXRFDSCVHLGFGAAYMFDSISCSSASVMN 317
           I+P L G+   + N  F S V LGF A      I  SS S+ N
Sbjct: 303 IVPTLLGSVNAWRNFTFSSGVCLGFKAQVRLKIIKVSSVSIGN 345


>U61946-10|AAC24388.1| 1827|Caenorhabditis elegans Hypothetical
           protein F47C12.1 protein.
          Length = 1827

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = -1

Query: 454 VSAIIPLLCGTPPQFCNXRFDSCVHLGFG 368
           +S   P+ CG  PQ  N   DS  ++ FG
Sbjct: 277 ISTCQPIYCGAVPQIANGFVDSATNVSFG 305


>Z78418-2|CAB01695.1|  817|Caenorhabditis elegans Hypothetical
           protein F25D7.3 protein.
          Length = 817

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 369 PKPKWTQLSNRXLQNWGGVPHNKGMI 446
           P P+  Q+ +  +QN GG+PH   +I
Sbjct: 753 PPPQHFQMDHSGMQNGGGIPHQHQLI 778


>U56963-11|AAB38127.1|  342|Caenorhabditis elegans Serpentine
           receptor, class v protein32 protein.
          Length = 342

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 9/21 (42%), Positives = 16/21 (76%)
 Frame = +1

Query: 88  LFVFTIECMLCTVVYFTIHYY 150
           L V ++ C+LC+V+Y ++ YY
Sbjct: 184 LIVVSLTCILCSVLYGSLFYY 204


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,017,563
Number of Sequences: 27780
Number of extensions: 314948
Number of successful extensions: 663
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 662
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)