Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_P20
         (652 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    22   4.5  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   4.5  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   5.9  
X91509-1|CAA62809.1|  103|Apis mellifera histone H4 protein.           21   7.8  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   7.8  

>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 8/9 (88%), Positives = 9/9 (100%)
 Frame = -3

Query: 128 TTVHSIHSI 102
           TT+HSIHSI
Sbjct: 107 TTIHSIHSI 115


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +3

Query: 480 LERIHKLNVMCGRRPNHVLVNEYTPGQGIM 569
           L R+  +  + G   N   + EY PG G++
Sbjct: 397 LIRVENIIDLEGAPQNFYYIEEYLPGNGVI 426


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 487 LSRYRSNQVGIVSAIIPLLCGTPP 416
           L++YR N V +    + LL   PP
Sbjct: 508 LNKYRGNGVSLKGETVGLLNALPP 531


>X91509-1|CAA62809.1|  103|Apis mellifera histone H4 protein.
          Length = 103

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = +3

Query: 354 NIYAAPKPKWTQLSNRXLQNWGGVPHNKGMIAETIPTWLDLYLERI 491
           NI    KP   +L+ R     GGV    G+I E     L ++LE +
Sbjct: 26  NIQGITKPAIRRLARR-----GGVKRISGLIYEETRGVLKVFLENV 66


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +2

Query: 596 PDHNNNISGLAHSL 637
           PDHN N S +A +L
Sbjct: 677 PDHNGNYSCVARNL 690


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,180
Number of Sequences: 438
Number of extensions: 3822
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)