Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_P18
         (620 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    25   0.51 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.51 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    25   0.68 
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     24   1.2  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    24   1.2  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           24   1.2  
AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant transcrip...    24   1.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   2.1  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    23   2.1  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   6.3  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   6.3  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    21   6.3  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   6.3  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   6.3  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   8.3  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 25.0 bits (52), Expect = 0.51
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 3   IFNPTYIMEINKLSNFVGFFIIFSLMPLA 89
           IF P  I ++ ++SNF+     FSL P A
Sbjct: 293 IFTPDRIPQLEEMSNFLKRHTGFSLRPAA 321


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.51
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -1

Query: 191 LFLIAISYRYCTIIERICAF 132
           LFL+ I Y YC +I  +C +
Sbjct: 280 LFLLCIYYFYCALIILLCIY 299



 Score = 21.8 bits (44), Expect = 4.8
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 515 FPLTLYHFQQPIFFL 471
           F L +Y+F  P+FFL
Sbjct: 129 FLLCIYYFVVPLFFL 143


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 24.6 bits (51), Expect = 0.68
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +3

Query: 111 CRSSTDPKCADPFDNSTVPITDCNQEKGLSHLPGMKPS 224
           C    DP  A P D +   + DC   +  + +PG  PS
Sbjct: 151 CDIDNDPNRAPPCDPAVCVLPDCFCSEDGTTIPGDLPS 188


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 294 HPNKHSHGSTSIHH 253
           HP  HSH    IHH
Sbjct: 86  HPQLHSHHGPPIHH 99


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 294 HPNKHSHGSTSIHH 253
           HP  HSH    IHH
Sbjct: 86  HPQLHSHHGPPIHH 99


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 294 HPNKHSHGSTSIHH 253
           HP  HSH    IHH
Sbjct: 86  HPQLHSHHGPPIHH 99


>AF243042-1|AAF68438.1|  126|Tribolium castaneum mutant
           transcription factor TcDfd1 protein.
          Length = 126

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 8/14 (57%), Positives = 8/14 (57%)
 Frame = -3

Query: 294 HPNKHSHGSTSIHH 253
           HP  HSH    IHH
Sbjct: 86  HPQLHSHHGPPIHH 99


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 321 FCLMRTGTYNIFVXYCTCN 377
           +C+  T TY+ F+ Y T N
Sbjct: 335 YCVYTTATYDSFMIYKTTN 353


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 321 FCLMRTGTYNIFVXYCTCN 377
           +C+  T TY+ F+ Y T N
Sbjct: 60  YCVYTTATYDSFMIYKTTN 78


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 108 NCRSSTDPKCADPFDNSTVPITDCNQEKGLS 200
           +CR S +    + FDNS  P+ + +  + LS
Sbjct: 57  SCRFSINQPYLNHFDNSVTPMVNHDFTQHLS 87


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/35 (28%), Positives = 15/35 (42%)
 Frame = +3

Query: 108 NCRSSTDPKCADPFDNSTVPITDCNQEKGLSHLPG 212
           +C   TDP  A   D +   + DC      + +PG
Sbjct: 149 SCTVETDPNRAPDCDPTQCVLPDCFCSADGTRIPG 183


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -1

Query: 356 KYIVCTSPHETKPFISLNAN 297
           K +V T P +  PF ++ AN
Sbjct: 188 KPVVVTKPPQAPPFATVGAN 207


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 108 NCRSSTDPKCADPFDNSTVPITDCNQEKGLS 200
           +CR S +    + FDNS  P+ + +  + LS
Sbjct: 57  SCRFSINQPYLNHFDNSVTPMVNHDFTQHLS 87


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +3

Query: 108 NCRSSTDPKCADPFDNSTVPITDCNQEKGLS 200
           +CR S +    + FDNS  P+ + +  + LS
Sbjct: 57  SCRFSINQPYLNHFDNSVTPMVNHDFTQHLS 87


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 48  FVGFFIIFSLMPLALSI 98
           F+G  +IF + PLA+ I
Sbjct: 238 FLGSILIFFIFPLAILI 254


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,636
Number of Sequences: 336
Number of extensions: 2885
Number of successful extensions: 19
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15875032
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)