Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_P18
         (620 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0665 - 30720842-30721003,30721290-30721448,30721555-307216...    28   6.9  
06_01_0600 + 4332886-4332896,4332968-4333067,4333588-4333664,433...    27   9.1  

>02_05_0665 -
           30720842-30721003,30721290-30721448,30721555-30721687,
           30722042-30722227,30722377-30722906
          Length = 389

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 16/46 (34%), Positives = 21/46 (45%)
 Frame = -3

Query: 234 CGTCLVSFPANAKVPFLDCNQLSVLYYYRKDLRIWDRCWICSSNIL 97
           C  CL S+   A++  L CN         K LR+   C +C  NIL
Sbjct: 338 CCICLSSYEDGAELSALPCNHHFHWTCITKWLRMHATCPLCKYNIL 383


>06_01_0600 +
           4332886-4332896,4332968-4333067,4333588-4333664,
           4333774-4333835,4334016-4334134,4334237-4334404,
           4335004-4335123
          Length = 218

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 6/20 (30%), Positives = 17/20 (85%)
 Frame = -1

Query: 197 KSLFLIAISYRYCTIIERIC 138
           K +++  +S+++C+++ER+C
Sbjct: 13  KHVYIDRLSFKFCSVVERVC 32


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,599,377
Number of Sequences: 37544
Number of extensions: 253304
Number of successful extensions: 657
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 657
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1502076244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)