Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_P18
         (620 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U56965-11|AAB52666.1|  137|Caenorhabditis elegans Hypothetical p...    53   1e-07
U88168-6|AAC24401.1|  127|Caenorhabditis elegans Hypothetical pr...    47   1e-05
U88168-7|AAC24396.2|  132|Caenorhabditis elegans Hypothetical pr...    39   0.003
U57054-3|AAA98725.1|  151|Caenorhabditis elegans Hypothetical pr...    29   2.0  
U56966-4|AAA98719.2|  906|Caenorhabditis elegans Ace(angiotensin...    28   4.7  
AF016442-9|AAB65921.1|  714|Caenorhabditis elegans Hypothetical ...    27   8.2  

>U56965-11|AAB52666.1|  137|Caenorhabditis elegans Hypothetical
           protein C15H9.9 protein.
          Length = 137

 Score = 53.2 bits (122), Expect = 1e-07
 Identities = 42/132 (31%), Positives = 59/132 (44%), Gaps = 6/132 (4%)
 Frame = +3

Query: 60  FIIFSLMPLALS--IKCWNCRSSTDPKCADPFDNSTVPITDCNQEKGLSHLPGMKPSMCR 233
           F++ + + L +S  I C+ C S+ +P C    D +                 G     CR
Sbjct: 6   FVLLASLALGVSANISCYQCTSNENPTCDANDDGALEAFKKTCTPLTEGTFKGNAAVGCR 65

Query: 234 KIRQKVNGEWRYFRDCAYLGEVGIQGDERFCLMRTGTYNIFVXYCTC-NSKDG--CNS-S 401
           KI Q V G     R+CAY GE  + G     L +TG + I + Y  C N K G  CNS +
Sbjct: 66  KITQSVEGVLSVVRECAYSGE-PVDG-----LKKTGNHAIRIHYYQCENEKAGTPCNSVA 119

Query: 402 SVISPLPIFLVV 437
            V SPL I  ++
Sbjct: 120 GVFSPLSILSLI 131


>U88168-6|AAC24401.1|  127|Caenorhabditis elegans Hypothetical
           protein K11H12.7 protein.
          Length = 127

 Score = 46.8 bits (106), Expect = 1e-05
 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
 Frame = +3

Query: 57  FFIIF-SLMPLALSIKCWNCRSSTDPKCADPFD--NSTVPITDCNQEKGLSHLPGMKPSM 227
           F I+F SL  ++ ++ C+ C S   P+C   ++  N   P+      K    +  +KP  
Sbjct: 3   FLIVFASLFAVSAALNCYICNSLNQPECVHNYEKFNKICPV------KSFGGMKSVKPLG 56

Query: 228 CRKIRQKVNGEWRYFRDCAYLGE 296
           CR  RQ V  E    R+CAY GE
Sbjct: 57  CRVSRQYVKEETSIVRECAYTGE 79


>U88168-7|AAC24396.2|  132|Caenorhabditis elegans Hypothetical
           protein K11H12.6 protein.
          Length = 132

 Score = 38.7 bits (86), Expect = 0.003
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
 Frame = +3

Query: 60  FIIFS-LMPLALSIKCWNCRSSTDPKCADPFD--NSTVPITDCNQEKGLSHLPGMKPSMC 230
           FI+F+ L  ++  + C+ C S   P C D +   N+  P+      + L  +   +P  C
Sbjct: 4   FIVFAPLFAVSAPLNCYICNSKKQPDCIDNYQAFNTICPV------RSLGGVKLHEPVGC 57

Query: 231 RKIRQKVNGEWRYFRDCAYLGE 296
           R  RQ    +    R+C YLGE
Sbjct: 58  RVTRQYSKEKMWIIRECGYLGE 79


>U57054-3|AAA98725.1|  151|Caenorhabditis elegans Hypothetical
           protein B0478.3 protein.
          Length = 151

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 23/100 (23%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
 Frame = +3

Query: 42  SNFVGFFIIFSLMPLALSIKCWNCRSSTDPKCADPFDNSTVPITD--CNQEKGLSHLPGM 215
           SNF+ + ++ SL+   + + C    S  D        N+T+P ++  C   +    +P +
Sbjct: 9   SNFLIYILVTSLIAFKICVFCQQTISIGDTGVTLATMNNTIPASNFSCGANRFTEFIPQL 68

Query: 216 -KPSMCRKIRQKVNGEWRYFRDCAYLGEVGIQ-GDERFCL 329
              + C+ +R  +N       +C Y  ++G    D  FCL
Sbjct: 69  FNSTECKNLRDPMNVCCETHDNC-YNTQIGKDFCDNEFCL 107


>U56966-4|AAA98719.2|  906|Caenorhabditis elegans Ace(angiotensin
           converting enzyme)-like non-peptidase protein 1, isoform
           a protein.
          Length = 906

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 14/45 (31%), Positives = 22/45 (48%)
 Frame = +3

Query: 150 DNSTVPITDCNQEKGLSHLPGMKPSMCRKIRQKVNGEWRYFRDCA 284
           DN   P +  ++EK  S L G +    + +R+     WRYF D +
Sbjct: 167 DNLQAPGSIKDEEKLRSWLAGYEAEAIKVLREVALSGWRYFNDAS 211


>AF016442-9|AAB65921.1|  714|Caenorhabditis elegans Hypothetical
           protein K12B6.8 protein.
          Length = 714

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 12/31 (38%), Positives = 14/31 (45%)
 Frame = +3

Query: 93  SIKCWNCRSSTDPKCADPFDNSTVPITDCNQ 185
           +IKC  C  S   KCA P    +V    C Q
Sbjct: 669 AIKCERCTKSIHEKCAAPLLQQSVMCPTCKQ 699


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,398,244
Number of Sequences: 27780
Number of extensions: 247368
Number of successful extensions: 717
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 714
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1353389824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)