Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_P14
         (653 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B5D11 Cluster: PREDICTED: similar to LOC398471 ...    45   0.001
UniRef50_Q7XBF1 Cluster: NBS-type resistance protein; n=23; Malv...    33   6.0  
UniRef50_Q7FZR6 Cluster: T6L9.2 protein; n=1; Arabidopsis thalia...    33   6.0  
UniRef50_Q9UU76 Cluster: Puf family RNA-binding protein; n=1; Sc...    33   7.9  

>UniRef50_UPI00015B5D11 Cluster: PREDICTED: similar to LOC398471
           protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
           similar to LOC398471 protein - Nasonia vitripennis
          Length = 658

 Score = 45.2 bits (102), Expect = 0.001
 Identities = 18/61 (29%), Positives = 38/61 (62%)
 Frame = +3

Query: 456 RRKAKITAEVFXISHKAKLLAAQIQRKVVKSDFKINSCKELHNMLKGQYKSIALTHDLSR 635
           +R+AK   + + ++ +AK +  +++R  + +D +    K+LH++++ QY  +   HDLSR
Sbjct: 136 KRRAKKLEDTYEVAIQAKQIGEKLRRSNLSADMQEKLTKKLHDLIQNQYAKMIFAHDLSR 195

Query: 636 V 638
           V
Sbjct: 196 V 196


>UniRef50_Q7XBF1 Cluster: NBS-type resistance protein; n=23;
           Malvaceae|Rep: NBS-type resistance protein - Gossypium
           barbadense (Sea-island cotton) (Egyptian cotton)
          Length = 173

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 17/57 (29%), Positives = 31/57 (54%)
 Frame = +3

Query: 477 AEVFXISHKAKLLAAQIQRKVVKSDFKINSCKELHNMLKGQYKSIALTHDLSRVFSL 647
           ++VF I    K +A+Q++R +   +  I    +L  M +GQ + + +  D+ R FSL
Sbjct: 33  SQVFDIRKLQKDIASQLERNLSDDESTIVRAGKLSKMFRGQMRYVLILDDVWRSFSL 89


>UniRef50_Q7FZR6 Cluster: T6L9.2 protein; n=1; Arabidopsis
           thaliana|Rep: T6L9.2 protein - Arabidopsis thaliana
           (Mouse-ear cress)
          Length = 783

 Score = 33.1 bits (72), Expect = 6.0
 Identities = 22/68 (32%), Positives = 29/68 (42%)
 Frame = +3

Query: 339 KGSKFVKTKEKSNFSKDEANGXXXXXXXXXXXXXQLXTVRRKAKITAEVFXISHKAKLLA 518
           KG+K V T  K+   K  A G             QL   R   K  AEV   +HK KL+ 
Sbjct: 659 KGTKSVATVSKAIAEKSIAKGSKSPVKKSQLLDSQLHLRRSPRKGVAEVIKTNHKCKLMD 718

Query: 519 AQIQRKVV 542
              +++VV
Sbjct: 719 ISGRKQVV 726


>UniRef50_Q9UU76 Cluster: Puf family RNA-binding protein; n=1;
           Schizosaccharomyces pombe|Rep: Puf family RNA-binding
           protein - Schizosaccharomyces pombe (Fission yeast)
          Length = 642

 Score = 32.7 bits (71), Expect = 7.9
 Identities = 31/151 (20%), Positives = 60/151 (39%), Gaps = 1/151 (0%)
 Frame = +3

Query: 189 DGVSSPKKKKLNSSHEQDXXXXXXXXXXXXXXXXXXXDGVKGFKKFTKNDKGSKFVKTKE 368
           D  S  KKK   SS   +                   D  + F  F ++   +  +++ E
Sbjct: 33  DSFSPKKKKNTTSSGSSESDSMSQNDKKKDSSLNESED--EDFAGFGESASENDELESAE 90

Query: 369 KSNFSKDEANGXXXXXXXXXXXXXQLXTVRRKAKITAEVFXISHKAKLLAAQIQRKV-VK 545
               + +E++              +L   R+  K  A+    S KAK L  ++++K  +K
Sbjct: 91  SEAENDEESSSQKSNSKESHAQRKKLQKERKAMKPFADT---SLKAKSLWDKLRQKTSIK 147

Query: 546 SDFKINSCKELHNMLKGQYKSIALTHDLSRV 638
           ++ +     EL ++++   K +   HD+SRV
Sbjct: 148 AEERKTIIAELFDLIRTNVKQLVFKHDMSRV 178


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 422,327,125
Number of Sequences: 1657284
Number of extensions: 5681440
Number of successful extensions: 13680
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13393
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13675
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)