Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_P06
(652 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable A... 144 1e-33
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 141 1e-32
UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX... 136 4e-31
UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5; T... 128 9e-29
UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX... 127 3e-28
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 118 1e-25
UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 101 1e-20
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 96 6e-19
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 95 2e-18
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 91 2e-17
UniRef50_Q8MYE9 Cluster: Similar to Mus musculus (Mouse). DEAD-b... 91 2e-17
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 91 2e-17
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 89 1e-16
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 85 1e-15
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 85 2e-15
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 84 2e-15
UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase MJ0... 84 3e-15
UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box RN... 83 6e-15
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 83 7e-15
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 83 7e-15
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 82 1e-14
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 82 1e-14
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 82 1e-14
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 82 1e-14
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 82 1e-14
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 81 2e-14
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 81 2e-14
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 81 2e-14
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 81 3e-14
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 81 3e-14
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 79 9e-14
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 79 1e-13
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 78 2e-13
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 77 3e-13
UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4). EIF... 77 3e-13
UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2; ... 77 4e-13
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 77 4e-13
UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;... 77 5e-13
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 77 5e-13
UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG136... 77 5e-13
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 76 6e-13
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 76 6e-13
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 76 6e-13
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 76 6e-13
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 76 8e-13
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 76 8e-13
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 75 1e-12
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 75 1e-12
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 75 1e-12
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 75 2e-12
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 75 2e-12
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 75 2e-12
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 74 3e-12
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 74 3e-12
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 74 3e-12
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 74 3e-12
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 74 3e-12
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 73 5e-12
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 73 5e-12
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 73 5e-12
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 73 5e-12
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 73 6e-12
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 73 6e-12
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 73 6e-12
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 73 6e-12
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 73 6e-12
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 73 8e-12
UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1; F... 73 8e-12
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 72 1e-11
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 72 1e-11
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 72 1e-11
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 72 1e-11
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 72 1e-11
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 72 1e-11
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 72 1e-11
UniRef50_Q9PPQ7 Cluster: ATP-dependent RNA helicase; n=1; Ureapl... 71 2e-11
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 71 2e-11
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 71 2e-11
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 71 2e-11
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 71 2e-11
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 71 2e-11
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 71 2e-11
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 71 2e-11
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 71 2e-11
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 71 2e-11
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 71 2e-11
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 71 2e-11
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 71 2e-11
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 71 2e-11
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 71 2e-11
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 71 2e-11
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 71 2e-11
UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein; ... 71 2e-11
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 71 2e-11
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 71 3e-11
UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN ... 71 3e-11
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 69 4e-11
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 70 4e-11
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 70 4e-11
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 70 4e-11
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 70 4e-11
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 70 4e-11
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 54 5e-11
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 70 6e-11
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 70 6e-11
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 70 6e-11
UniRef50_A7P0R7 Cluster: Chromosome chr19 scaffold_4, whole geno... 70 6e-11
UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=... 69 7e-11
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 69 7e-11
UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82; E... 69 7e-11
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 69 7e-11
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 69 7e-11
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 69 7e-11
UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;... 69 1e-10
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 69 1e-10
UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1; Ent... 69 1e-10
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 69 1e-10
UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3; P... 69 1e-10
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 68 2e-10
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 68 2e-10
UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, wh... 68 2e-10
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 68 2e-10
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 68 2e-10
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 68 2e-10
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 68 2e-10
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 68 2e-10
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 68 2e-10
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 68 2e-10
UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1; S... 68 2e-10
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 67 3e-10
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 67 3e-10
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 67 3e-10
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 67 3e-10
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 67 4e-10
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 67 4e-10
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 67 4e-10
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 67 4e-10
UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform... 67 4e-10
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 67 4e-10
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 67 4e-10
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 67 4e-10
UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX... 67 4e-10
UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7; A... 67 4e-10
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 67 4e-10
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 66 5e-10
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 66 7e-10
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 66 7e-10
UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellu... 66 9e-10
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 66 9e-10
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 66 9e-10
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 65 1e-09
UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein; ... 65 1e-09
UniRef50_A2DEZ7 Cluster: DEAD/DEAH box helicase family protein; ... 65 1e-09
UniRef50_Q0D622 Cluster: DEAD-box ATP-dependent RNA helicase 32;... 65 1e-09
UniRef50_Q9FFT9 Cluster: Probable DEAD-box ATP-dependent RNA hel... 65 1e-09
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 65 1e-09
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 65 1e-09
UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX... 65 1e-09
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 65 2e-09
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 65 2e-09
UniRef50_Q5CXB0 Cluster: CG6539/Dhh1-like SF II RNA helicase; n=... 65 2e-09
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 64 2e-09
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 64 2e-09
UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box fa... 64 2e-09
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 64 2e-09
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 64 2e-09
UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1; ... 64 2e-09
UniRef50_Q4Q8D5 Cluster: ATP-dependent RNA helicase, putative; n... 64 2e-09
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 64 2e-09
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 64 2e-09
UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1; E... 64 2e-09
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 64 3e-09
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 64 3e-09
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 64 3e-09
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 64 3e-09
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 64 3e-09
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 64 4e-09
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 64 4e-09
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 64 4e-09
UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein; ... 64 4e-09
UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4; Sulfol... 64 4e-09
UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3; F... 64 4e-09
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 63 5e-09
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 63 5e-09
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 63 5e-09
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 63 5e-09
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 63 5e-09
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 63 5e-09
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 63 5e-09
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 63 5e-09
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 63 5e-09
UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1; ... 63 5e-09
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 63 5e-09
UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87; ... 63 5e-09
UniRef50_Q9VHU1 Cluster: Probable ATP-dependent RNA helicase DDX... 63 5e-09
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 63 5e-09
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 63 6e-09
UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4... 63 6e-09
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 63 6e-09
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 63 6e-09
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 63 6e-09
UniRef50_A7U5X3 Cluster: DEAD-box helicase 18; n=7; Plasmodium|R... 63 6e-09
UniRef50_A2DGJ7 Cluster: DEAD/DEAH box helicase family protein; ... 63 6e-09
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 63 6e-09
UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=... 62 8e-09
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 62 8e-09
UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter ... 62 8e-09
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 62 8e-09
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 62 8e-09
UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein; ... 62 8e-09
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 62 8e-09
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 62 8e-09
UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX... 62 8e-09
UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4; W... 62 1e-08
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 62 1e-08
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 62 1e-08
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 62 1e-08
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 62 1e-08
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 62 1e-08
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 62 1e-08
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 62 1e-08
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 62 1e-08
UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3; Actino... 62 1e-08
UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70; ... 62 1e-08
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 62 1e-08
UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2; Strept... 61 2e-08
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 61 2e-08
UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5; Tr... 61 2e-08
UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3; P... 61 2e-08
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 61 2e-08
UniRef50_A2FYU9 Cluster: DEAD/DEAH box helicase family protein; ... 61 2e-08
UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 varia... 61 2e-08
UniRef50_O74764 Cluster: ATP-dependent rRNA helicase spb4; n=1; ... 61 2e-08
UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1; P... 61 2e-08
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 61 2e-08
UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2; F... 61 2e-08
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 61 2e-08
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 61 3e-08
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 61 3e-08
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 61 3e-08
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 61 3e-08
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 61 3e-08
UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein; ... 61 3e-08
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 61 3e-08
UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1; ... 61 3e-08
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 61 3e-08
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 61 3e-08
UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase con... 61 3e-08
UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX... 61 3e-08
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 61 3e-08
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 60 3e-08
UniRef50_A0EIJ0 Cluster: Chromosome undetermined scaffold_99, wh... 60 3e-08
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 60 3e-08
UniRef50_Q9Y6V7 Cluster: Probable ATP-dependent RNA helicase DDX... 60 3e-08
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 60 5e-08
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 60 5e-08
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 60 5e-08
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 60 5e-08
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 60 5e-08
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 60 5e-08
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 60 5e-08
UniRef50_Q9AW79 Cluster: Putative RNA-dependent helicase; n=1; G... 60 5e-08
UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2; ... 60 5e-08
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 60 5e-08
UniRef50_UPI0001509DC1 Cluster: DEAD/DEAH box helicase family pr... 60 6e-08
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 60 6e-08
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 60 6e-08
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 60 6e-08
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 60 6e-08
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 60 6e-08
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 60 6e-08
UniRef50_A2DFG9 Cluster: DEAD/DEAH box helicase family protein; ... 60 6e-08
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 60 6e-08
UniRef50_Q6K7R9 Cluster: DEAD-box ATP-dependent RNA helicase 48;... 60 6e-08
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 59 8e-08
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 59 8e-08
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 59 8e-08
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 59 8e-08
UniRef50_Q28T45 Cluster: DEAD/DEAH box helicase-like protein; n=... 59 8e-08
UniRef50_A0KZD5 Cluster: DEAD/DEAH box helicase domain protein; ... 59 8e-08
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 59 8e-08
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 59 8e-08
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 59 8e-08
UniRef50_Q9K7L3 Cluster: RNA helicase; n=2; Bacillus|Rep: RNA he... 59 1e-07
UniRef50_Q5FNK0 Cluster: ATP-dependent RNA helicase; n=1; Glucon... 59 1e-07
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 59 1e-07
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 59 1e-07
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 59 1e-07
UniRef50_Q013Q9 Cluster: DEAD/DEAH box helicase, putative; n=7; ... 59 1e-07
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 59 1e-07
UniRef50_Q873H9 Cluster: ATP-dependent rRNA helicase spb-4; n=14... 59 1e-07
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 59 1e-07
UniRef50_A6PWH4 Cluster: HLA-B associated transcript 1; n=6; Hom... 51 1e-07
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 58 1e-07
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 58 1e-07
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 58 1e-07
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 58 1e-07
UniRef50_A6TX49 Cluster: DEAD/DEAH box helicase domain protein; ... 58 1e-07
UniRef50_A7QKJ8 Cluster: Chromosome chr2 scaffold_112, whole gen... 58 1e-07
UniRef50_A4S6F2 Cluster: Predicted protein; n=1; Ostreococcus lu... 58 1e-07
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 58 1e-07
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 58 1e-07
UniRef50_Q9C8S9 Cluster: Probable DEAD-box ATP-dependent RNA hel... 58 1e-07
UniRef50_Q4PEX7 Cluster: ATP-dependent RNA helicase DBP8; n=1; U... 58 1e-07
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 58 1e-07
UniRef50_UPI00006CEB85 Cluster: DEAD/DEAH box helicase family pr... 58 2e-07
UniRef50_UPI000049A17D Cluster: helicase; n=1; Entamoeba histoly... 58 2e-07
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 58 2e-07
UniRef50_Q21EB3 Cluster: DEAD/DEAH box helicase-like protein; n=... 58 2e-07
UniRef50_Q0TQ86 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 58 2e-07
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 58 2e-07
UniRef50_A2D755 Cluster: DEAD/DEAH box helicase family protein; ... 58 2e-07
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 58 2e-07
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 58 2e-07
UniRef50_Q6MQY6 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 58 2e-07
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 58 2e-07
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 58 2e-07
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 58 2e-07
UniRef50_A4AFV6 Cluster: ATP-dependent RNA helicase; n=3; Actino... 58 2e-07
UniRef50_A1VA48 Cluster: DEAD/DEAH box helicase domain protein; ... 58 2e-07
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 58 2e-07
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 58 2e-07
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 58 2e-07
UniRef50_Q9UHL0 Cluster: ATP-dependent RNA helicase DDX25; n=111... 58 2e-07
UniRef50_UPI0000498CE0 Cluster: DEAD/DEAH box helicase; n=1; Ent... 57 3e-07
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 57 3e-07
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 57 3e-07
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 57 3e-07
UniRef50_A4LYS0 Cluster: DEAD/DEAH box helicase domain protein; ... 57 3e-07
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 57 3e-07
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 57 3e-07
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 57 3e-07
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 57 3e-07
UniRef50_UPI000155CE2F Cluster: PREDICTED: similar to R27090_2; ... 57 4e-07
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 57 4e-07
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 57 4e-07
UniRef50_Q893G8 Cluster: ATP-dependent RNA helicase; n=4; Clostr... 57 4e-07
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 57 4e-07
UniRef50_Q11QF9 Cluster: Inducible ATP-independent RNA helicase;... 57 4e-07
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 57 4e-07
UniRef50_Q9SWV9 Cluster: Ethylene-responsive RNA helicase; n=5; ... 57 4e-07
UniRef50_Q7QNT5 Cluster: GLP_88_2286_3572; n=1; Giardia lamblia ... 57 4e-07
UniRef50_Q5CIF9 Cluster: DEAD-box RNA helicase; n=2; Cryptospori... 57 4e-07
UniRef50_Q2WF63 Cluster: Putative uncharacterized protein; n=4; ... 57 4e-07
UniRef50_Q8L4E9 Cluster: DEAD-box ATP-dependent RNA helicase 36;... 57 4e-07
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 57 4e-07
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 56 6e-07
UniRef50_Q6F1J3 Cluster: ATP-dependent RNA helicase; n=4; Mollic... 56 6e-07
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 56 6e-07
UniRef50_A6GSW1 Cluster: Putative ATP-dependent RNA helicase; n=... 56 6e-07
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 56 6e-07
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 56 6e-07
UniRef50_Q49K88 Cluster: DEAD box RNA helicase; n=1; Toxoplasma ... 56 6e-07
UniRef50_A0DK92 Cluster: Chromosome undetermined scaffold_54, wh... 56 6e-07
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 56 7e-07
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 56 7e-07
UniRef50_Q7NAY1 Cluster: SrmB; n=1; Mycoplasma gallisepticum|Rep... 56 7e-07
UniRef50_Q5QVE4 Cluster: ATP-dependent RNA helicase; n=2; Idioma... 56 7e-07
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 56 7e-07
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 56 7e-07
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ... 56 7e-07
UniRef50_Q7QUN8 Cluster: GLP_47_37459_39102; n=1; Giardia lambli... 56 7e-07
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 56 7e-07
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 56 7e-07
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 56 7e-07
UniRef50_Q0UN57 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 56 7e-07
UniRef50_Q6C835 Cluster: ATP-dependent RNA helicase DBP7; n=1; Y... 56 7e-07
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 56 1e-06
UniRef50_UPI00006CA44F Cluster: DEAD/DEAH box helicase family pr... 56 1e-06
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 56 1e-06
UniRef50_A5EYB1 Cluster: ATP-dependent rna helicase Rhl; n=2; Ga... 56 1e-06
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 56 1e-06
UniRef50_A1USG3 Cluster: DEAD/DEAH box helicase domain/helicase ... 56 1e-06
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 56 1e-06
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 56 1e-06
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 56 1e-06
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 56 1e-06
UniRef50_A0CZH3 Cluster: Chromosome undetermined scaffold_32, wh... 56 1e-06
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 56 1e-06
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 56 1e-06
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 56 1e-06
UniRef50_P20447 Cluster: ATP-dependent RNA helicase DBP3; n=20; ... 56 1e-06
UniRef50_UPI0000498D8E Cluster: ATP-dependent RNA helicase; n=1;... 55 1e-06
UniRef50_Q1WSN6 Cluster: ATP-dependent RNA helicase; n=1; Lactob... 55 1e-06
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 55 1e-06
UniRef50_Q03GJ4 Cluster: Superfamily II DNA and RNA helicase; n=... 55 1e-06
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 55 1e-06
UniRef50_Q4Q1P0 Cluster: DEAD box RNA helicase, putative; n=5; T... 55 1e-06
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 55 1e-06
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 55 1e-06
UniRef50_P38719 Cluster: ATP-dependent RNA helicase DBP8; n=14; ... 55 1e-06
UniRef50_Q7RYZ7 Cluster: ATP-dependent RNA helicase dbp-8; n=15;... 55 1e-06
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 55 2e-06
UniRef50_Q1VPX9 Cluster: ATP-independent RNA helicase; n=9; Bact... 55 2e-06
UniRef50_Q03AA2 Cluster: Superfamily II DNA and RNA helicase; n=... 55 2e-06
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 55 2e-06
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 55 2e-06
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 55 2e-06
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 55 2e-06
UniRef50_UPI0000498D2C Cluster: DEAD/DEAH box helicase; n=3; Ent... 54 2e-06
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 54 2e-06
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 54 2e-06
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 54 2e-06
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 54 2e-06
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 54 2e-06
UniRef50_Q54EC2 Cluster: Putative uncharacterized protein; n=1; ... 54 2e-06
UniRef50_Q4N7J8 Cluster: DEAD box RNA helicase, putative; n=2; T... 54 2e-06
UniRef50_Q22LR2 Cluster: Type III restriction enzyme, res subuni... 54 2e-06
UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicas... 54 2e-06
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 54 2e-06
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 54 2e-06
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 54 2e-06
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 54 2e-06
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 54 2e-06
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 54 2e-06
UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 54 2e-06
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 54 3e-06
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 54 3e-06
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 54 3e-06
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas... 54 3e-06
UniRef50_Q00GM9 Cluster: Plastid RNA helicase VDL protein; n=1; ... 54 3e-06
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 54 3e-06
UniRef50_Q5BXN2 Cluster: SJCHGC07723 protein; n=1; Schistosoma j... 54 3e-06
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 54 3e-06
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 54 3e-06
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 54 3e-06
UniRef50_P38112 Cluster: ATP-dependent RNA helicase MAK5; n=6; S... 54 3e-06
UniRef50_Q4IBS2 Cluster: ATP-dependent RNA helicase MAK5; n=2; S... 54 3e-06
UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p; ... 54 4e-06
UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; ... 54 4e-06
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 54 4e-06
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 54 4e-06
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 54 4e-06
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 54 4e-06
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 54 4e-06
UniRef50_A5A159 Cluster: DEAD-box helicase; n=5; Plasmodium|Rep:... 54 4e-06
UniRef50_Q8X0H1 Cluster: Related to RNA helicase MSS116; n=2; Ne... 54 4e-06
UniRef50_Q5VRY0 Cluster: DEAD-box ATP-dependent RNA helicase 39;... 54 4e-06
UniRef50_A5DUB2 Cluster: ATP-dependent RNA helicase MAK5; n=5; S... 54 4e-06
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 54 4e-06
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 54 4e-06
UniRef50_UPI00006CBDDC Cluster: DEAD/DEAH box helicase family pr... 53 5e-06
UniRef50_Q0S0C5 Cluster: Possible ATP-dependent RNA helicase; n=... 53 5e-06
UniRef50_Q01EH4 Cluster: Ddx49 Ddx49-related DEAD box helicase s... 53 5e-06
UniRef50_A4RUB4 Cluster: Predicted protein; n=2; Ostreococcus|Re... 53 5e-06
UniRef50_Q4N0E9 Cluster: ATP-dependent RNA helicase, putative; n... 53 5e-06
UniRef50_A7ARY5 Cluster: DEAD/DEAH box helicase protein family; ... 53 5e-06
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 53 5e-06
UniRef50_Q4P7Y2 Cluster: Putative uncharacterized protein; n=1; ... 53 5e-06
UniRef50_Q2GSJ4 Cluster: Putative uncharacterized protein; n=2; ... 53 5e-06
UniRef50_Q06218 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 53 5e-06
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 53 5e-06
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 53 7e-06
UniRef50_UPI0000498886 Cluster: DEAD/DEAH box helicase; n=1; Ent... 53 7e-06
UniRef50_Q9RXH8 Cluster: ATP-dependent RNA helicase, putative; n... 53 7e-06
UniRef50_Q92AT6 Cluster: Lin1833 protein; n=13; Listeria|Rep: Li... 53 7e-06
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 53 7e-06
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 53 7e-06
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 53 7e-06
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 53 7e-06
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 53 7e-06
UniRef50_A0LD66 Cluster: DEAD/DEAH box helicase domain protein; ... 53 7e-06
UniRef50_Q7QTB2 Cluster: GLP_15_13424_14974; n=2; Giardia intest... 53 7e-06
UniRef50_Q7QP86 Cluster: GLP_397_1016_18; n=1; Giardia lamblia A... 53 7e-06
UniRef50_Q7K4L8 Cluster: LD33749p; n=1; Drosophila melanogaster|... 53 7e-06
UniRef50_Q5CHB7 Cluster: Putative uncharacterized protein; n=2; ... 53 7e-06
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 53 7e-06
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 53 7e-06
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 53 7e-06
UniRef50_A5K5I2 Cluster: Putative uncharacterized protein; n=1; ... 53 7e-06
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 53 7e-06
UniRef50_Q9UTP9 Cluster: ATP-dependent RNA helicase dbp4; n=1; S... 53 7e-06
UniRef50_Q88XN5 Cluster: ATP-dependent RNA helicase; n=2; Lactob... 52 9e-06
UniRef50_Q836U7 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 52 9e-06
UniRef50_Q1MYS3 Cluster: Probable ATP-dependent RNA helicase; n=... 52 9e-06
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 52 9e-06
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 52 9e-06
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 52 9e-06
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 52 9e-06
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 52 9e-06
UniRef50_Q5APM7 Cluster: ATP-dependent RNA helicase MSS116, mito... 52 9e-06
UniRef50_Q966L9 Cluster: ATP-dependent RNA helicase glh-2; n=4; ... 52 9e-06
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 52 9e-06
UniRef50_UPI0000D57716 Cluster: PREDICTED: similar to CG9143-PA;... 52 1e-05
UniRef50_UPI0000F3242A Cluster: Probable ATP-dependent RNA helic... 52 1e-05
UniRef50_A6Q863 Cluster: ATP-dependent RNA helicase; n=1; Sulfur... 52 1e-05
UniRef50_Q5BXU1 Cluster: SJCHGC08663 protein; n=1; Schistosoma j... 52 1e-05
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 52 1e-05
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 52 1e-05
UniRef50_Q96XQ7 Cluster: 337aa long hypothetical ATP-dependent R... 52 1e-05
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 52 1e-05
UniRef50_Q8AYI1 Cluster: Vasa-like protein; n=1; Squalus acanthi... 52 2e-05
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 52 2e-05
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 52 2e-05
UniRef50_Q22308 Cluster: Putative uncharacterized protein; n=7; ... 52 2e-05
UniRef50_Q84TG1 Cluster: DEAD-box ATP-dependent RNA helicase 57;... 52 2e-05
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 52 2e-05
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 52 2e-05
UniRef50_Q750Q4 Cluster: ATP-dependent RNA helicase MSS116, mito... 52 2e-05
UniRef50_Q8NHQ9 Cluster: ATP-dependent RNA helicase DDX55; n=86;... 52 2e-05
>UniRef50_UPI0000D55AB0 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3) (Regulator of steroidogenic factor 1)
(ROSF-1); n=1; Tribolium castaneum|Rep: PREDICTED:
similar to Probable ATP-dependent RNA helicase DDX20
(DEAD box protein 20) (DEAD box protein DP 103)
(Component of gems 3) (Gemin-3) (Regulator of
steroidogenic factor 1) (ROSF-1) - Tribolium castaneum
Length = 688
Score = 144 bits (350), Expect = 1e-33
Identities = 69/133 (51%), Positives = 95/133 (71%), Gaps = 1/133 (0%)
Frame = +1
Query: 253 HDIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLL 432
HD+ RT+DV + EN++F S+LL + GL SGF+KPSPIQ +PLG+CGFDL++
Sbjct: 7 HDLDAKERTKDVILDENISFASLLLPDDIKQGLSVSGFKKPSPIQFKAIPLGRCGFDLIV 66
Query: 433 EAKSGTGKTVVFSIIALEKLN-LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEX 609
++KSGTGKT+VFS IALE +N + LQV+IL PTREIA QI DV++ +G H GL +E
Sbjct: 67 KSKSGTGKTLVFSTIALETVNTAKDHLQVLILVPTREIAVQIEDVLRSVGCHVNGLKIES 126
Query: 610 VMGGLSVNEXIAK 648
+GG + + + K
Sbjct: 127 FIGGRPLEDDLKK 139
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 141 bits (342), Expect = 1e-32
Identities = 68/128 (53%), Positives = 94/128 (73%), Gaps = 1/128 (0%)
Frame = +1
Query: 253 HDIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLL 432
H++ RT D++I E+VTF+ M LS+ L GL++ GF KPSPIQ +PLG+CGFDL++
Sbjct: 7 HNLSAKERTSDIEIQEDVTFSQMGLSQQVLNGLLNCGFHKPSPIQHKSIPLGRCGFDLIV 66
Query: 433 EAKSGTGKTVVFSIIALEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEX 609
AKSGTGKT VF IIALE +++ + +QV+IL PTREIA QI +VI +G KGL VE
Sbjct: 67 RAKSGTGKTAVFGIIALEMIDIKISSVQVIILAPTREIAIQIKEVIASLGCEIKGLKVES 126
Query: 610 VMGGLSVN 633
+GG++++
Sbjct: 127 FIGGVAMD 134
>UniRef50_P0C218 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=9; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX20 - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 761
Score = 136 bits (329), Expect = 4e-31
Identities = 68/129 (52%), Positives = 92/129 (71%), Gaps = 1/129 (0%)
Frame = +1
Query: 253 HDIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLL 432
H++++ TRT DV I V F+S+LLS+ L GL +SGFQ+PSPIQL +PLG+CG DL++
Sbjct: 9 HELQSRTRTDDVLISGGVEFSSLLLSKPVLEGLSASGFQRPSPIQLKAIPLGRCGLDLIV 68
Query: 433 EAKSGTGKTVVFSIIALEKLNLNNG-LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEX 609
+AKSGTGKT VF+ IAL+ L L N QV++L PTREIA QI V+ IGS +GL
Sbjct: 69 QAKSGTGKTCVFTTIALDSLILENATTQVLVLAPTREIAVQIHAVVMAIGSAMEGLECHV 128
Query: 610 VMGGLSVNE 636
+GG +++
Sbjct: 129 FIGGRPISQ 137
>UniRef50_Q8R4Z5 Cluster: DEAD-box corepressor DP103 beta; n=5;
Tetrapoda|Rep: DEAD-box corepressor DP103 beta - Mus
musculus (Mouse)
Length = 505
Score = 128 bits (310), Expect = 9e-29
Identities = 67/130 (51%), Positives = 87/130 (66%), Gaps = 2/130 (1%)
Frame = +1
Query: 253 HDIRNS-TRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLL 429
HDI TRT DV + E F S+LLS L GL ++GF++PSP+QL +PLG+CG DL+
Sbjct: 45 HDIGGPRTRTGDVVLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLI 104
Query: 430 LEAKSGTGKTVVFSIIALEKLNLNN-GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVE 606
++AKSGTGKT VFS IAL+ L L N Q++IL PTREIA QI VI IG +GL
Sbjct: 105 VQAKSGTGKTCVFSTIALDSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECH 164
Query: 607 XVMGGLSVNE 636
+GG +++
Sbjct: 165 VFIGGTPLSQ 174
>UniRef50_Q9UHI6 Cluster: Probable ATP-dependent RNA helicase DDX20;
n=24; Eumetazoa|Rep: Probable ATP-dependent RNA helicase
DDX20 - Homo sapiens (Human)
Length = 824
Score = 127 bits (306), Expect = 3e-28
Identities = 64/123 (52%), Positives = 84/123 (68%), Gaps = 1/123 (0%)
Frame = +1
Query: 271 TRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGT 450
TRT DV + E F S+LLS L GL ++GF++PSP+QL +PLG+CG DL+++AKSGT
Sbjct: 51 TRTGDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGT 110
Query: 451 GKTVVFSIIALEKLNLNN-GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLS 627
GKT VFS IAL+ L L N Q++IL PTREIA QI VI IG +GL +GG
Sbjct: 111 GKTCVFSTIALDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTP 170
Query: 628 VNE 636
+++
Sbjct: 171 LSQ 173
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 118 bits (284), Expect = 1e-25
Identities = 57/105 (54%), Positives = 76/105 (72%), Gaps = 1/105 (0%)
Frame = +1
Query: 319 MLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNL 498
M S+ L GL GFQ+PSPIQL +PLG+CGFDL++ AKSGTGKT+VF II+LE +++
Sbjct: 1 MGFSQKILDGLSVCGFQRPSPIQLKAIPLGRCGFDLIMRAKSGTGKTLVFCIISLEMIDI 60
Query: 499 N-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSV 630
+ + +QV+IL PTREIA QI V +G K L VE +GGL++
Sbjct: 61 DISSVQVLILAPTREIAVQIAQVFSSVGCEIKDLKVEVFIGGLAI 105
>UniRef50_Q17BP5 Cluster: DEAD box ATP-dependent RNA helicase; n=2;
Culicidae|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 1061
Score = 101 bits (243), Expect = 1e-20
Identities = 53/122 (43%), Positives = 75/122 (61%), Gaps = 1/122 (0%)
Frame = +1
Query: 274 RTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 453
RT DV+ ++ F+ M LSE L GL + F PSPIQ +PL K G DLL++AKSGTG
Sbjct: 12 RTADVEFDLSLQFSKMFLSEPVLRGLTRNNFTHPSPIQARAIPLAKLGLDLLVQAKSGTG 71
Query: 454 KTVVFSIIALEKLNLNNGL-QVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSV 630
KT+VF+++ E N + Q + + PTREIA QI DV+ +IG + +GGL +
Sbjct: 72 KTLVFTVLITENHNPDVMFPQSLTVVPTREIAVQIEDVLNRIGYSVPNFRAKSFIGGLDI 131
Query: 631 NE 636
++
Sbjct: 132 SQ 133
>UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46;
n=2; Caenorhabditis elegans|Rep: Putative
uncharacterized protein mel-46 - Caenorhabditis elegans
Length = 973
Score = 96.3 bits (229), Expect = 6e-19
Identities = 46/117 (39%), Positives = 76/117 (64%), Gaps = 1/117 (0%)
Frame = +1
Query: 274 RTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 453
R + + N TF S+++ + TL L +S F +PSP+Q +P+G G D+L++AKSGTG
Sbjct: 12 RGSSIDVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTG 71
Query: 454 KTVVFSIIALEKLNLNNG-LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
KT+VFS++A+E L+ + +Q +I+TPTREI+ QI + ++++ G +GG
Sbjct: 72 KTLVFSVLAVENLDSRSSHIQKVIVTPTREISVQIKETVRKVAP--TGARTSVYVGG 126
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 94.7 bits (225), Expect = 2e-18
Identities = 50/134 (37%), Positives = 75/134 (55%), Gaps = 1/134 (0%)
Frame = +1
Query: 250 PHDIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLL 429
P D+R +T DV + F L L G+ ++GF++PSPIQ +P+ G D+L
Sbjct: 20 PKDLR--PQTEDVTATQGSRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDIL 77
Query: 430 LEAKSGTGKTVVFSIIALEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVE 606
AK+GTGKT F I L ++N + + +Q +IL PTRE+A Q V K +G+H L V
Sbjct: 78 ARAKNGTGKTASFIIPTLNRINTSLSHIQALILVPTRELALQTSQVCKTLGAHIPNLQVM 137
Query: 607 XVMGGLSVNEXIAK 648
GG ++ + I +
Sbjct: 138 ITTGGTTLRDDILR 151
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 91.5 bits (217), Expect = 2e-17
Identities = 46/129 (35%), Positives = 71/129 (55%), Gaps = 1/129 (0%)
Frame = +1
Query: 265 NSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKS 444
N RT DV + F L L G+ G++KPSPIQ +P+ G D+L AK+
Sbjct: 76 NRVRTSDVTATKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKN 135
Query: 445 GTGKTVVFSIIALEKLNL-NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
GTGK+ + I LE+++L + +Q ++L PTRE+A Q+ + QI H G+ V GG
Sbjct: 136 GTGKSGAYLIPMLERIDLKKDHIQALVLVPTRELALQVSQISIQIAKHLGGVKVMATTGG 195
Query: 622 LSVNEXIAK 648
++ + I +
Sbjct: 196 TNLRDDIMR 204
>UniRef50_Q8MYE9 Cluster: Similar to Mus musculus (Mouse). DEAD-box
corepressor DP103 alpha; n=2; Dictyostelium
discoideum|Rep: Similar to Mus musculus (Mouse).
DEAD-box corepressor DP103 alpha - Dictyostelium
discoideum (Slime mold)
Length = 837
Score = 91.5 bits (217), Expect = 2e-17
Identities = 40/71 (56%), Positives = 54/71 (76%)
Frame = +1
Query: 274 RTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 453
RT D++I +N+TF+ +LL + L GL G+Q+PSPIQL +PLG G DL+ +AKSGTG
Sbjct: 33 RTNDIEIEDNITFSELLLQKEVLKGLEDGGYQRPSPIQLKAIPLGISGVDLIAQAKSGTG 92
Query: 454 KTVVFSIIALE 486
KT+VF +IALE
Sbjct: 93 KTIVFGVIALE 103
Score = 44.0 bits (99), Expect = 0.003
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +1
Query: 514 VMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVN 633
V+I+ PTREIA QI DVIK I + K + E +GGL+ N
Sbjct: 152 VLIIAPTREIAVQIKDVIKSISKYCKRIKCEVFIGGLNSN 191
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 91.5 bits (217), Expect = 2e-17
Identities = 48/126 (38%), Positives = 71/126 (56%), Gaps = 1/126 (0%)
Frame = +1
Query: 274 RTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 453
+T DV + TF L L G+ +GF+KPSPIQ +P+ G D+L AK+GTG
Sbjct: 36 QTDDVLNTKGNTFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTG 95
Query: 454 KTVVFSIIALEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSV 630
KT F I LEK+ N +Q +I+ PTRE+A Q V++ +G H G++ GG ++
Sbjct: 96 KTAAFVIPTLEKVKPKLNKIQALIMVPTRELALQTSQVVRTLGK-HCGISCMVTTGGTNL 154
Query: 631 NEXIAK 648
+ I +
Sbjct: 155 RDDILR 160
>UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila
pseudoobscura|Rep: GA19670-PA - Drosophila pseudoobscura
(Fruit fly)
Length = 1007
Score = 88.6 bits (210), Expect = 1e-16
Identities = 43/128 (33%), Positives = 76/128 (59%), Gaps = 2/128 (1%)
Frame = +1
Query: 253 HDIRNS-TRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLL 429
H++ N RT DV+ + F+++ L + GL + F+ P+ IQ +P+ G DLL
Sbjct: 7 HNLANGQNRTSDVEAGQMKHFSALHLRRQVMRGLAAENFRTPTKIQAAAIPIALTGMDLL 66
Query: 430 LEAKSGTGKTVVFSIIALEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVE 606
+++KSGTGKT+++ + AL+ +L+ +V+++ PTRE+A Q+ D+ + +G + V
Sbjct: 67 VQSKSGTGKTLIYVVTALQMCSLSTQHPEVLVILPTRELALQVHDIFRFLGEKLRSFKVS 126
Query: 607 XVMGGLSV 630
MGG V
Sbjct: 127 SFMGGTDV 134
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 85.0 bits (201), Expect = 1e-15
Identities = 56/131 (42%), Positives = 80/131 (61%), Gaps = 6/131 (4%)
Frame = +1
Query: 274 RTRDVQI--VENV-TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKS 444
+T+D+Q +E V TF + LS+ L G+ S GF++PS IQ + G D+L +A+S
Sbjct: 43 QTQDLQENWIEQVETFEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPIILGKDVLAQAQS 102
Query: 445 GTGKTVVFSIIALEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEX--VM 615
GTGKT F+I AL++++ N QV+IL P RE+A QI DV+K IG + LN+E +
Sbjct: 103 GTGKTGTFTIGALQRIDPNQRKTQVIILAPVRELAKQIYDVVKGIGQY---LNIEAFCCI 159
Query: 616 GGLSVNEXIAK 648
GG S E K
Sbjct: 160 GGTSTQETREK 170
>UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35;
Vibrionales|Rep: ATP-dependent RNA helicase DeaD -
Vibrio cholerae
Length = 663
Score = 84.6 bits (200), Expect = 2e-15
Identities = 44/110 (40%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Frame = +1
Query: 304 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 483
+ F+ + L+ L L GF P+PIQ +P+ G D L +A++GTGKT FS+ L
Sbjct: 26 IQFSDLALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTAAFSLPLL 85
Query: 484 EKLNLNN-GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSV 630
KLNL+ Q +++ PTRE+A Q+ IK +G + KGL V + GG S+
Sbjct: 86 NKLNLSQYKPQAIVMAPTRELAIQVAAEIKNLGQNIKGLKVLEIYGGASI 135
>UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA
helicase SA1885; n=13; Staphylococcus|Rep: Probable
DEAD-box ATP-dependent RNA helicase SA1885 -
Staphylococcus aureus (strain N315)
Length = 506
Score = 84.2 bits (199), Expect = 2e-15
Identities = 42/111 (37%), Positives = 68/111 (61%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F + +S+ T+ L S GF++P+PIQ +P G D+L +A++GTGKT F I +EK
Sbjct: 4 FKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTGTGKTGAFGIPLIEK 63
Query: 490 LNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 642
+ G+Q +IL PTRE+A Q+ + +++ S +G+ V V GG+ + I
Sbjct: 64 VVGKQGVQSLILAPTRELAMQVAEQLREF-SRGQGVQVVTVFGGMPIERQI 113
>UniRef50_Q58083 Cluster: Probable ATP-dependent RNA helicase
MJ0669; n=11; cellular organisms|Rep: Probable
ATP-dependent RNA helicase MJ0669 - Methanococcus
jannaschii
Length = 367
Score = 83.8 bits (198), Expect = 3e-15
Identities = 41/113 (36%), Positives = 73/113 (64%), Gaps = 1/113 (0%)
Frame = +1
Query: 295 VENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLG-KCGFDLLLEAKSGTGKTVVFS 471
VE + F + LS+ L + + GF+KP+ IQ+ +PL ++++ +A++G+GKT F+
Sbjct: 3 VEYMNFNELNLSDNILNAIRNKGFEKPTDIQMKVIPLFLNDEYNIVAQARTGSGKTASFA 62
Query: 472 IIALEKLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSV 630
I +E +N NNG++ +ILTPTRE+A Q+ D I+ + +K L + + GG ++
Sbjct: 63 IPLIELVNENNGIEAIILTPTRELAIQVADEIESL-KGNKNLKIAKIYGGKAI 114
>UniRef50_Q4FSS4 Cluster: Possible ATP-dependent DEAD/DEAH box
RNA-helicase; n=4; Gammaproteobacteria|Rep: Possible
ATP-dependent DEAD/DEAH box RNA-helicase - Psychrobacter
arcticum
Length = 567
Score = 83.0 bits (196), Expect = 6e-15
Identities = 47/133 (35%), Positives = 70/133 (52%), Gaps = 4/133 (3%)
Frame = +1
Query: 256 DIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 435
D N T D VTFT + +++ L L SG+ P+PIQ +P G DLLL
Sbjct: 28 DTNNEAATTDATDENKVTFTDLNIAKPILSALERSGYTHPTPIQAEAIPFALQGRDLLLS 87
Query: 436 AKSGTGKTVVFSIIALEKL----NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNV 603
A++G+GKT F I L++L + + + +ILTPTRE+A Q+ D ++ +GL
Sbjct: 88 AQTGSGKTAAFVIPVLDRLSRATSFDKLTKALILTPTRELAQQVHDSVRTYSKDMRGLFC 147
Query: 604 EXVMGGLSVNEXI 642
++GG N I
Sbjct: 148 VPLVGGAPYNGQI 160
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 82.6 bits (195), Expect = 7e-15
Identities = 40/109 (36%), Positives = 65/109 (59%)
Frame = +1
Query: 304 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 483
+ F + + E +I GF++PSPIQ +P G D++ +A++GTGKT F I +
Sbjct: 6 IKFNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGIPVV 65
Query: 484 EKLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSV 630
EK++ +Q +ILTPTRE+A Q+ I+++ S HK + + GG S+
Sbjct: 66 EKVSTGRHVQALILTPTRELAIQVSGEIQKL-SKHKKIRTLPIYGGQSI 113
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 82.6 bits (195), Expect = 7e-15
Identities = 40/102 (39%), Positives = 63/102 (61%)
Frame = +1
Query: 325 LSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN 504
L +F L G+ +GF PSP+Q +P+ G DL+ +A++GTGKT F+I L LN N
Sbjct: 52 LKDFVLKGIREAGFSTPSPVQSQSIPIILQGKDLIAQAQTGTGKTAAFAIPILNTLNRNK 111
Query: 505 GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSV 630
++ +I+TPTRE+A QI + I ++G + + + GG S+
Sbjct: 112 DIEALIITPTRELAMQISEEILKLGRFGR-IKTICMYGGQSI 152
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 82.2 bits (194), Expect = 1e-14
Identities = 43/114 (37%), Positives = 67/114 (58%), Gaps = 1/114 (0%)
Frame = +1
Query: 304 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 483
+TF + LSE L L GF++PSPIQ +P G D++ +A++GTGKT F + +
Sbjct: 6 LTFRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIV 65
Query: 484 EKL-NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 642
E+L +Q ++LTPTRE+A Q+ + I +IG H + + + GG S+ I
Sbjct: 66 ERLVPGQRAVQALVLTPTRELAIQVAEEITKIGRHAR-VKTIAIYGGQSIERQI 118
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 81.8 bits (193), Expect = 1e-14
Identities = 47/120 (39%), Positives = 72/120 (60%), Gaps = 1/120 (0%)
Frame = +1
Query: 280 RDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKT 459
R V + +N F+++ LS L + GF+ +PIQ +PL G D++ +AK+G+GKT
Sbjct: 40 RGVPVSQN-EFSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKT 98
Query: 460 VVFSIIALEKLNLNNG-LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNE 636
FS+ L K+NL+ LQ +IL PTRE+A+Q+ I+++G GL V + GG S E
Sbjct: 99 AAFSLPILNKINLDQPLLQALILCPTRELASQVVTEIRKLGRRLPGLKVLAMTGGQSGRE 158
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 81.8 bits (193), Expect = 1e-14
Identities = 47/119 (39%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
Frame = +1
Query: 274 RTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 453
+T V E V F S+ L E L ++S GF + IQ +P G D+L EA++GTG
Sbjct: 5 KTETVTEPEAVAFASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTG 64
Query: 454 KTVVFSIIALEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLS 627
KT F + AL K++ + Q+M+L PTRE+A Q+ + I+ G KGL V + GG S
Sbjct: 65 KTAAFGLPALAKIDTSIKKPQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQS 123
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 81.8 bits (193), Expect = 1e-14
Identities = 42/121 (34%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
Frame = +1
Query: 277 TRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGK 456
TR + + ++ F M LSE L G+ P+P+Q G DL++ +K+GTGK
Sbjct: 20 TRPAEYIADIGFDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGK 79
Query: 457 TVVFSIIALEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVN 633
T F + LEK+ + ++ +IL PTRE+A Q+ D +K + + HKGL + + GG S+
Sbjct: 80 TAAFGLPLLEKIPADERRVRALILCPTRELALQVADELKML-AKHKGLKIAAIYGGASMK 138
Query: 634 E 636
+
Sbjct: 139 Q 139
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 81.8 bits (193), Expect = 1e-14
Identities = 42/111 (37%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVP-LGKCGFDLLLEAKSGTGKTVVFSIIALE 486
F + L+E L +I GF+ P+ +Q +P L + DL+ A++GTGKT F ++
Sbjct: 4 FEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLLEKDIDLVALAQTGTGKTAAFGFPVIQ 63
Query: 487 KLNLNN-GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNE 636
K++ NN Q +IL+PTRE+ QI + +K + KG+NV V GG S+ E
Sbjct: 64 KIDANNRNTQALILSPTRELCLQITNELKNYSKYEKGINVVAVYGGASITE 114
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 81.4 bits (192), Expect = 2e-14
Identities = 46/138 (33%), Positives = 73/138 (52%), Gaps = 1/138 (0%)
Frame = +1
Query: 238 LCL*PHDIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCG 417
L L P D+R +T DV + F L L G+ G++ PS IQ +P+ G
Sbjct: 62 LKLPPKDLR--IKTLDVTSTKGNEFEDYCLKRELLIGIFEMGWE-PSSIQEESIPIALSG 118
Query: 418 FDLLLEAKSGTGKTVVFSIIALEKLNL-NNGLQVMILTPTREIAAQICDVIKQIGSHHKG 594
D+L AK+GTGK+ + I LE+L+L + +Q M++ PTRE+A Q+ + Q+ H G
Sbjct: 119 RDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGG 178
Query: 595 LNVEXVMGGLSVNEXIAK 648
V GG ++ + + +
Sbjct: 179 AKVMATTGGTNLRDDVMR 196
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 81.4 bits (192), Expect = 2e-14
Identities = 41/107 (38%), Positives = 62/107 (57%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F SM L L + GF+KP+PIQ+ +P+ G DL+ +A++GTGKT F I L +
Sbjct: 6 FYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPILNR 65
Query: 490 LNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSV 630
+ GLQ ++L PTRE+A Q+ + I + S + V + GG S+
Sbjct: 66 VIKGEGLQALVLCPTRELAVQVTEEISSL-SRRMRIQVLAIYGGQSI 111
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 81.4 bits (192), Expect = 2e-14
Identities = 41/116 (35%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Frame = +1
Query: 298 ENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSII 477
E TF +SE L + GF++P+PIQ +P G D+ +A++GTGKT F I
Sbjct: 3 ETKTFAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGIP 62
Query: 478 ALEKLNLNN-GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 642
+E+L+ +N +Q ++L+PTRE+A Q + ++ + KGLNV + GG + +
Sbjct: 63 IIERLDPDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPIERQL 118
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 80.6 bits (190), Expect = 3e-14
Identities = 43/112 (38%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F + LS + + S G+ + +PIQ +P+ G DL +A++GTGKT F I A+E
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH 62
Query: 490 LNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 642
++++ N Q +IL PTRE+A Q+C +K++ KGL V V GG S+ I
Sbjct: 63 VDISINQTQSLILCPTRELALQVCTELKKLSKFKKGLRVLAVYGGESIERQI 114
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 80.6 bits (190), Expect = 3e-14
Identities = 47/120 (39%), Positives = 68/120 (56%), Gaps = 4/120 (3%)
Frame = +1
Query: 289 QIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF 468
Q+ EN F S+ LS L GL S G+ KPSPIQ +P+ G D++ A +G+GKT F
Sbjct: 228 QMYEN--FNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAF 285
Query: 469 SIIALEKLNLN----NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNE 636
I +E+L +V++L PTRE+A Q+ DV KQI G+ +GGL++ +
Sbjct: 286 MIPIIERLLYKPAKIASTRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQ 345
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 79.0 bits (186), Expect = 9e-14
Identities = 46/121 (38%), Positives = 69/121 (57%), Gaps = 1/121 (0%)
Frame = +1
Query: 289 QIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF 468
+IV+N F M L E L G+ + GF+KPS IQ + G+D++ +A+SGTGKT F
Sbjct: 30 EIVDN--FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATF 87
Query: 469 SIIALEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXIA 645
+I L++L + Q ++L PTRE+A QI VI +G + G +GG +V +
Sbjct: 88 AISILQQLEIEFKETQALVLAPTRELAQQIQKVILALGD-YMGATCHACIGGTNVRNEMQ 146
Query: 646 K 648
K
Sbjct: 147 K 147
>UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6
protein - Homo sapiens (Human)
Length = 187
Score = 78.6 bits (185), Expect = 1e-13
Identities = 42/110 (38%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
Frame = +1
Query: 238 LCL*PHDIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCG 417
L L P D+R +T DV + F L L G+ G++KPSPIQ +P+ G
Sbjct: 76 LKLPPKDLR--IKTSDVTSTKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSG 133
Query: 418 FDLLLEAKSGTGKTVVFSIIALEKLNL-NNGLQVMILTPTREIAAQICDV 564
D+L AK+GTGK+ + I LE+L+L + +Q M++ PTRE+A Q+ +
Sbjct: 134 RDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQVSQI 183
>UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 407
Score = 78.2 bits (184), Expect = 2e-13
Identities = 47/125 (37%), Positives = 71/125 (56%), Gaps = 9/125 (7%)
Frame = +1
Query: 301 NVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 480
+ +F + L E L ++GF PSP+QL VPLG+ G D++ +AKSGTGKT+ F +IA
Sbjct: 36 SASFGDLQLDERLTRALRAAGFDAPSPVQLACVPLGRFGCDVIAQAKSGTGKTMTFVVIA 95
Query: 481 LEKLNL-NNGLQVMILTPTREIAAQ----ICDVIKQI----GSHHKGLNVEXVMGGLSVN 633
LE+++ Q + L PTRE A Q ++I++ G G+ ++GGL V
Sbjct: 96 LERVDAGRRRTQALALAPTRECAVQTHECFVEMIEKFKDMDGDARGGIETCLLVGGLPVK 155
Query: 634 EXIAK 648
E A+
Sbjct: 156 EDRAR 160
>UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG5800-PA - Tribolium castaneum
Length = 770
Score = 77.4 bits (182), Expect = 3e-13
Identities = 42/110 (38%), Positives = 67/110 (60%), Gaps = 5/110 (4%)
Frame = +1
Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 486
+F + LS TL GL G+ KP+ IQ + LG G D+L A++G+GKT+ F I LE
Sbjct: 52 SFDDLPLSPKTLKGLKECGYTKPTDIQRETIKLGLTGKDILGAAQTGSGKTLAFLIPILE 111
Query: 487 KLNLN-----NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
+L +GL +++TPTRE+A QI + ++++G HH+ + ++GG
Sbjct: 112 RLYCKQWTRLDGLGALVITPTRELAYQIFEELRRVGEHHE-FSAGLIIGG 160
>UniRef50_Q5CX71 Cluster: Hca4p helicase DBP4 (Helicase CA4).
EIF4A-1-family RNA SFII helicase; n=3;
Cryptosporidium|Rep: Hca4p helicase DBP4 (Helicase CA4).
EIF4A-1-family RNA SFII helicase - Cryptosporidium
parvum Iowa II
Length = 770
Score = 77.4 bits (182), Expect = 3e-13
Identities = 42/112 (37%), Positives = 69/112 (61%), Gaps = 5/112 (4%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F+ + +S TL GL + G+ + + IQ +P G D++ +A++G+GKT+ + I LE
Sbjct: 73 FSDLPISRRTLEGLRAEGYYQMTLIQRDTLPHSLQGRDIIGQARTGSGKTLAYVIPILEN 132
Query: 490 LNLNN-----GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSV 630
+ +N GL +ILTPTRE+A+Q+ DVIK+IG H L+ ++GG +
Sbjct: 133 IYRDNYCSIDGLLSLILTPTRELASQVFDVIKEIGKFHSTLSAGCIVGGKDI 184
>UniRef50_Q0CMM5 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Aspergillus terreus (strain NIH 2624)
Length = 729
Score = 77.0 bits (181), Expect = 4e-13
Identities = 49/127 (38%), Positives = 75/127 (59%), Gaps = 6/127 (4%)
Frame = +1
Query: 274 RTRDVQIVENV-TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGT 450
R D+ + E+ FT + LSE TL GL +S ++ + IQ V G D+L AK+G+
Sbjct: 35 RVEDLDLKESFKAFTDLPLSEPTLSGLSASHYKTLTDIQSRAVSHALKGRDILGAAKTGS 94
Query: 451 GKTVVFSIIALEKLNL-----NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVM 615
GKT+ F I LE L ++GL +IL+PTRE+A QI +V++++G +H + V+
Sbjct: 95 GKTLAFLIPVLENLYRKQWAEHDGLGALILSPTRELAIQIFEVLRKVGRYHH-FSAGLVI 153
Query: 616 GGLSVNE 636
GG S+ E
Sbjct: 154 GGKSLKE 160
>UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP4 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 770
Score = 77.0 bits (181), Expect = 4e-13
Identities = 46/121 (38%), Positives = 70/121 (57%), Gaps = 5/121 (4%)
Frame = +1
Query: 283 DVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTV 462
D +I + F + +S+ TL GL S F K + IQ +P+ G D+L AK+G+GKT+
Sbjct: 34 DPKITKAKFFKDLPISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTL 93
Query: 463 VFSIIALEKLNLN-----NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLS 627
F + +EKL +GL +I++PTRE+A QI +V+ +IGS H + V+GG
Sbjct: 94 AFLVPVIEKLYREKWTEFDGLGALIISPTRELAMQIYEVLTKIGS-HTSFSAGLVIGGKD 152
Query: 628 V 630
V
Sbjct: 153 V 153
>UniRef50_UPI0000585111 Cluster: PREDICTED: hypothetical protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
hypothetical protein - Strongylocentrotus purpuratus
Length = 1117
Score = 76.6 bits (180), Expect = 5e-13
Identities = 39/68 (57%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Frame = +1
Query: 421 DLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMILTPTREIAAQICDVIKQIGSHHKGL 597
DL+++AKSGTGKT VFS+IALE ++L N QV+IL PTREIA QI D I+ IG +GL
Sbjct: 5 DLIVQAKSGTGKTCVFSVIALEGIDLTNPSTQVLILAPTREIAVQIQDTIRAIGCEMEGL 64
Query: 598 NVEXVMGG 621
+GG
Sbjct: 65 RSHVFIGG 72
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 76.6 bits (180), Expect = 5e-13
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
Frame = +1
Query: 304 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 483
++F M L L L + F P+PIQL +P G D+L EA++GTGKT F + AL
Sbjct: 8 LSFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEGQDVLGEAQTGTGKTAAFGLPAL 67
Query: 484 EKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
K++ + QV+++TPTRE+A Q+ + ++ + +G+ V V GG
Sbjct: 68 AKIDASVKQTQVLVVTPTRELAIQVAEALEGFAAKMRGVGVATVYGG 114
>UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG13685;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG13685 - Caenorhabditis
briggsae
Length = 935
Score = 76.6 bits (180), Expect = 5e-13
Identities = 42/101 (41%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Frame = +1
Query: 277 TRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGK 456
T DVQ N TF S+++ + TL +K +Q +P+G G D+L++AKSGTGK
Sbjct: 15 TLDVQ--SNCTFESLMIGQKTL--------EKLKSVQAKAIPVGLLGRDMLVQAKSGTGK 64
Query: 457 TVVFSIIALEKLNLN-NGLQVMILTPTREIAAQICDVIKQI 576
T+VFS++A+E L+L + +Q +I+TPTREI+ QI + ++++
Sbjct: 65 TLVFSVLAVENLDLKAHYIQKVIITPTREISTQIKETVRKL 105
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 76.2 bits (179), Expect = 6e-13
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVP-LGKCGFDLLLEAKSGTGKTVVFSIIALE 486
F + LS+ L GL GF+ P+ IQ +P L K D + A++GTGKT F + L+
Sbjct: 15 FEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLKHDGDFIGLAQTGTGKTAAFGLPLLD 74
Query: 487 KLNLNNG-LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 642
+++N+ +Q +IL PTRE+A QIC ++Q+ H LNV V GG ++ I
Sbjct: 75 LIDVNSREVQALILAPTRELAQQICGQMEQMSKHLGKLNVVPVFGGANIMNQI 127
>UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep:
Predicted protein - Nematostella vectensis
Length = 643
Score = 76.2 bits (179), Expect = 6e-13
Identities = 43/121 (35%), Positives = 72/121 (59%), Gaps = 5/121 (4%)
Frame = +1
Query: 274 RTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 453
R +++ E F+ +S+ TL GL+ +GF P+ IQ G+P+ G D+L AK+G+G
Sbjct: 40 RCKEIGSSEVEKFSDFPISKRTLDGLMKAGFVTPTDIQKQGIPVALSGRDVLGAAKTGSG 99
Query: 454 KTVVFSIIALE-----KLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMG 618
KT+ F I +E K +GL ++++PTRE+A Q +V+ +IG+ H L+ ++G
Sbjct: 100 KTLAFLIPIIETLWRQKWTSMDGLGALVISPTRELAYQTFEVLVKIGNKH-DLSAGLIIG 158
Query: 619 G 621
G
Sbjct: 159 G 159
>UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3;
Methanosarcinaceae|Rep: DEAD-box RNA helicase -
Methanococcoides burtonii
Length = 522
Score = 76.2 bits (179), Expect = 6e-13
Identities = 37/112 (33%), Positives = 67/112 (59%)
Frame = +1
Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 486
+F + + + L + F++P+ IQ +PL G D++ A +G+GKT+ F ++
Sbjct: 3 SFKKLGIEDAILRSIEDKKFEEPTEIQKMAIPLILEGKDIIGGAATGSGKTLAFGCGIIQ 62
Query: 487 KLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 642
K+ NG++ ++LTPTRE+A Q+ + +K+ S HK L V + GG+++N I
Sbjct: 63 KIEKGNGIRALVLTPTRELAEQVQNSLKEF-SRHKQLRVAPIYGGVAINPQI 113
>UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase DBP4 -
Chaetomium globosum (Soil fungus)
Length = 825
Score = 76.2 bits (179), Expect = 6e-13
Identities = 45/114 (39%), Positives = 69/114 (60%), Gaps = 5/114 (4%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
FT + L E T GL +S F+ + +Q +PL G D+L AK+G+GKT+ F + LEK
Sbjct: 55 FTDLPLCEATASGLRASHFEVLTDVQRAAIPLALKGRDILGAAKTGSGKTLAFLVPVLEK 114
Query: 490 L-----NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNE 636
L +GL +I++PTRE+A QI +V+++IG +H + V+GG S+ E
Sbjct: 115 LYHAKWTEYDGLGALIISPTRELAVQIFEVLRKIGRNH-FFSAGLVIGGKSLKE 167
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 75.8 bits (178), Expect = 8e-13
Identities = 42/107 (39%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F SM LS L G++ G++ P+PIQ +PL G D++ A++G+GKT F I EK
Sbjct: 38 FQSMALSFPILKGILKRGYKIPTPIQRKTIPLALEGRDIVAMARTGSGKTACFLIPLFEK 97
Query: 490 LNLNN---GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
L + G + +IL+PTRE+A Q IK++G GL ++GG
Sbjct: 98 LKIRQAKVGARALILSPTRELALQTLKFIKELG-RFTGLKATIILGG 143
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 75.8 bits (178), Expect = 8e-13
Identities = 43/113 (38%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLL-EAKSGTGKTVVFSIIALE 486
F M LS+ L + G++ P+PIQ +PL G + ++ +A++GTGKT F I +E
Sbjct: 4 FQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIPLIE 63
Query: 487 KLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 642
+L+ N +Q ++LTPTRE+A Q+C+ I + +K LN+ V GG+S+ I
Sbjct: 64 RLDEKANDVQALVLTPTRELALQVCNEIDSL-KGNKRLNLLPVYGGVSIGNQI 115
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 75.4 bits (177), Expect = 1e-12
Identities = 46/130 (35%), Positives = 68/130 (52%), Gaps = 6/130 (4%)
Frame = +1
Query: 274 RTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 453
R + + + F S+ + E L + G+Q P+PIQ +PL G DLL A++GTG
Sbjct: 72 RNQTTDHTDTMQFRSLAIIEPILQAIEEEGYQTPTPIQAEAIPLILDGNDLLGCAQTGTG 131
Query: 454 KTVVFSIIALEKLNL------NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVM 615
KT F+I L+ LN ++ +I+TPTRE+A QI + K G H GL +
Sbjct: 132 KTAAFAIPVLQLLNAVKTNEKKRKIRSLIITPTRELAIQIGESFKAYG-RHTGLTSTVIF 190
Query: 616 GGLSVNEXIA 645
GG++ N A
Sbjct: 191 GGVNQNPQTA 200
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 75.4 bits (177), Expect = 1e-12
Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Frame = +1
Query: 328 SEFTLXGLISS-----GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL 492
SEF + G I+ GF+ +PIQ +P+ G D++ EA++GTGKT F+I LE L
Sbjct: 7 SEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIPVLENL 66
Query: 493 NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXIAK 648
Q +I+ PTRE+ Q+ + IK+IG + K + V V GG S+ IA+
Sbjct: 67 EAERVPQALIICPTRELCLQVSEEIKRIGKYMK-VKVLAVYGGQSIGNQIAQ 117
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 74.9 bits (176), Expect = 1e-12
Identities = 42/111 (37%), Positives = 65/111 (58%), Gaps = 3/111 (2%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F SM LS+ + G++ G++ P+PIQ +P+ G D++ A++G+GKT F I EK
Sbjct: 40 FQSMGLSQSVIRGILKRGYKIPTPIQRKTIPIALDGRDVVAMARTGSGKTACFLIPMFEK 99
Query: 490 L---NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVN 633
L G + +IL+PTRE+A Q IK+IG GL ++GG S++
Sbjct: 100 LKTRQAKTGARALILSPTRELALQTQRFIKEIG-RFTGLKSSVILGGDSMD 149
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 74.5 bits (175), Expect = 2e-12
Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Frame = +1
Query: 295 VENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 474
+E +F+ + LS + + G+++P+PIQ +PL G D+ +A +GTGKT F I
Sbjct: 1 MEIPSFSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGI 60
Query: 475 IALEKLN-LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 642
A+E N +Q ++L P+RE+A Q+ + ++ H KG+++ V GG + I
Sbjct: 61 PAIELCQPANRNVQTIVLCPSRELAVQVGTELNKLAMHKKGISILPVYGGQPIERQI 117
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 74.5 bits (175), Expect = 2e-12
Identities = 44/115 (38%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Frame = +1
Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 486
TF +M L E L G+ + GF+KPS IQ + G D++ +++SGTGKT FSI L+
Sbjct: 39 TFDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQ 98
Query: 487 KLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXIAK 648
L++ Q +IL PTRE+A QI + +G + + +GG +V E I K
Sbjct: 99 CLDIQVRETQALILAPTRELAVQIQKGLLALGD-YMNVQCHACIGGTNVGEDIRK 152
>UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54;
Gammaproteobacteria|Rep: Cold-shock DEAD box protein A -
Shigella flexneri
Length = 629
Score = 74.5 bits (175), Expect = 2e-12
Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 1/106 (0%)
Frame = +1
Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 486
TF + L L L G++KPSPIQ +P G D+L A++G+GKT FS+ L+
Sbjct: 7 TFADLGLKAPILEALNDLGYEKPSPIQAECIPHLLNGRDVLGMAQTGSGKTAAFSLPLLQ 66
Query: 487 KLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
L+ Q+++L PTRE+A Q+ + + H +G+NV + GG
Sbjct: 67 NLDPELKAPQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGG 112
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 74.1 bits (174), Expect = 3e-12
Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Frame = +1
Query: 304 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 483
V+FT L + L+ GF +P+PIQ +PL G DL+ +A++GTGKT F + L
Sbjct: 55 VSFTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLL 114
Query: 484 EKLNLNNG-LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLS 627
++ + +Q ++L PTRE+A Q+ D + S G NV V GG S
Sbjct: 115 NNIDFSKKCVQALVLAPTRELAQQVGDALATY-SGDDGRNVLVVYGGSS 162
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 74.1 bits (174), Expect = 3e-12
Identities = 43/113 (38%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F SE L L G+ PSPIQ P G DL+ +A++GTGKT F++ LE+
Sbjct: 73 FDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLLER 132
Query: 490 LNLNNGL-QVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXIA 645
L QV++L PTRE+A Q+ D K + H L V V GG I+
Sbjct: 133 LESGQKTPQVLVLAPTRELAMQVADSFKAYAAGHPHLKVLAVYGGTDFRSQIS 185
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 74.1 bits (174), Expect = 3e-12
Identities = 38/113 (33%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
Frame = +1
Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 486
TF + LS+ L + S GF++ +PIQ +P G D++ +A++GTGKT F + L+
Sbjct: 3 TFRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLD 62
Query: 487 KLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 642
K++ + +Q +++ PTRE+A Q+ + + +IG HK + + + GG +N I
Sbjct: 63 KVDTHKESVQGIVIAPTRELAIQVGEELYKIGK-HKRVRILPIYGGQDINRQI 114
>UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: Putative ATP-dependent
RNA helicase - Neptuniibacter caesariensis
Length = 427
Score = 73.7 bits (173), Expect = 3e-12
Identities = 43/111 (38%), Positives = 65/111 (58%), Gaps = 5/111 (4%)
Frame = +1
Query: 331 EFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN--- 501
+FTL L G+++P+PIQ +PL G DLL EA++GTGKT F++ +EKL+ N
Sbjct: 16 QFTLKNL---GYEQPTPIQSQAIPLVLRGDDLLAEAQTGTGKTASFALPIIEKLSKNPID 72
Query: 502 --NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXIAK 648
++ ++L PTRE+A Q+ D + G G+ V V GG+ V I +
Sbjct: 73 GYRPVRALVLAPTRELAIQVADNTLEYG-RDLGMRVISVYGGVPVENQIKR 122
>UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box
family; n=6; Bacteria|Rep: ATP-dependent RNA helicase,
DEAD-box family - Sulfurovum sp. (strain NBC37-1)
Length = 492
Score = 73.7 bits (173), Expect = 3e-12
Identities = 34/113 (30%), Positives = 62/113 (54%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
FT L + + +GF++PSP+Q +PL G D++ +A++GTGKT F + +
Sbjct: 3 FTDFNLKDTIQAAVAEAGFKEPSPVQKDAIPLVLEGHDMIAQAQTGTGKTAAFGLPIMSM 62
Query: 490 LNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXIAK 648
+ + ++ +++ PTRE+A Q+ D + + G GL V GG + + I +
Sbjct: 63 MKADGSVEGLVIVPTRELAMQVSDELFRFGK-LSGLKTATVYGGTAYGKQIER 114
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 73.3 bits (172), Expect = 5e-12
Identities = 39/113 (34%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F + LS+ + + G++ PSPIQ +P G D+L +A++GTGKT F++ L +
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTR 76
Query: 490 LNLNN-GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXIA 645
LN QV++L PTRE+A Q+ + ++ + G V V GG S + +A
Sbjct: 77 TVLNQVKPQVLVLAPTRELAIQVAEAFQRYAASISGFRVLPVYGGQSYGQQLA 129
>UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18;
Bacteria|Rep: ATP-dependent RNA helicase DeaD - Azoarcus
sp. (strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 658
Score = 73.3 bits (172), Expect = 5e-12
Identities = 41/109 (37%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Frame = +1
Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 486
+F + L L L G++ PSPIQ +P G DLL EA++GTGKT F++ L+
Sbjct: 45 SFAQLDLRAPLLDALSEIGYETPSPIQAICIPHLLAGHDLLGEAQTGTGKTAAFALPLLD 104
Query: 487 KLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSV 630
+L+L QV++L PTRE+A Q+ + ++ + G +V V GG S+
Sbjct: 105 RLDLAVKNPQVLVLAPTRELAIQVAEAFQRYAKNLPGFHVLPVYGGQSM 153
>UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-like;
n=7; Alphaproteobacteria|Rep: Helicase-like:DEAD/DEAH
box helicase-like - Caulobacter sp. K31
Length = 542
Score = 73.3 bits (172), Expect = 5e-12
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 6/111 (5%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
FT + L++ L L G+ P+PIQ +PL G DLL A++GTGKT F++ L +
Sbjct: 67 FTDLGLAKPLLKALTDKGYTVPTPIQAQAIPLVMSGRDLLGIAQTGTGKTAAFALPILHR 126
Query: 490 LNLN------NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGL 624
L + G + ++L+PTRE+A QI + + G H GL V + GG+
Sbjct: 127 LAEDKKPAPRRGFRCLVLSPTRELATQIAESFRDYGK-HMGLTVATIFGGV 176
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 73.3 bits (172), Expect = 5e-12
Identities = 38/113 (33%), Positives = 68/113 (60%), Gaps = 1/113 (0%)
Frame = +1
Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 486
TF + LS+ + + GF++ +PIQ +PL D++ +A++GTGKT F I +E
Sbjct: 3 TFQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVE 62
Query: 487 KLNL-NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 642
K+N+ N+ +Q +++ PTRE+A Q+ + + +IG+ K + V + GG + I
Sbjct: 63 KVNVKNSAVQALVVAPTRELAIQVSEELYKIGA-VKRVRVLPIYGGQDIERQI 114
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 72.9 bits (171), Expect = 6e-12
Identities = 43/110 (39%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Frame = +1
Query: 304 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 483
+TF ++ L E L L G+ P+PIQ +P+ G DLL A++GTGKT FSI L
Sbjct: 1 MTFENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPIL 60
Query: 484 EKL---NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGL 624
+KL + G++ ++LTPTRE+A QI + + G + GL + GG+
Sbjct: 61 QKLYKTDHRKGIKALVLTPTRELAIQIGESFEAYG-RYTGLKHAVIFGGV 109
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 72.9 bits (171), Expect = 6e-12
Identities = 42/112 (37%), Positives = 63/112 (56%), Gaps = 6/112 (5%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F + L+ L L +G+ KP+PIQ +PL G DLL A++GTGKT F++ L +
Sbjct: 9 FADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGKTASFALPLLHR 68
Query: 490 LNL------NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLS 627
L NG +V++L PTRE+ +QI D + S H+ + V + GG+S
Sbjct: 69 LAATPRPAPKNGARVLVLAPTRELVSQIADGFESF-SRHQPVRVTTIFGGVS 119
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 72.9 bits (171), Expect = 6e-12
Identities = 43/119 (36%), Positives = 68/119 (57%), Gaps = 3/119 (2%)
Frame = +1
Query: 301 NVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 480
++ + M LS L ++ + +PSPIQ +PL G D+L +A++GTGKT F I
Sbjct: 3 DINYADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPI 62
Query: 481 LEKLN---LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXIAK 648
+E+L + Q +ILTPTRE+A Q+ D I ++ +H + +NV V GG + + K
Sbjct: 63 IERLEHGPNSRNPQALILTPTRELAVQVRDEIAKL-THGQRINVVAVYGGKPLRSQMEK 120
>UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 727
Score = 72.9 bits (171), Expect = 6e-12
Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 5/116 (4%)
Frame = +1
Query: 289 QIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF 468
+I E +F+ LS+ TL GL + KP+ IQ + G D+L AK+G+GKT+ F
Sbjct: 57 KIEETSSFSDFPLSKKTLGGLKQGQYHKPTAIQRESILPALQGKDILAAAKTGSGKTLAF 116
Query: 469 SIIALEKLNLN-----NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
I EKL N +GL +I+TPTRE+A QI + + +IG H ++GG
Sbjct: 117 LIPVFEKLYTNQWTKLDGLGALIITPTRELALQIFETVAKIGKLH-DFTTGLIIGG 171
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 72.9 bits (171), Expect = 6e-12
Identities = 38/114 (33%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
Frame = +1
Query: 304 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 483
+TF LS + + GF++ +PIQ +PLG D++ +A++GTGKT F I +
Sbjct: 3 ITFQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLV 62
Query: 484 EKLNLNN-GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 642
EK+N + +Q +++ PTRE+A Q+ + + +IG K V + GG + I
Sbjct: 63 EKINPESPNIQAIVIAPTRELAIQVSEELYKIG-QDKRAKVLPIYGGQDIGRQI 115
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 72.5 bits (170), Expect = 8e-12
Identities = 49/128 (38%), Positives = 70/128 (54%), Gaps = 3/128 (2%)
Frame = +1
Query: 268 STRTRDVQIVENVT-FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKS 444
S+ RD + + +T F M LS+ L ++ F P+P+Q +P G D+L A++
Sbjct: 14 SSHKRDPERRQRLTTFNDMPLSDVLKQRLEAAQFINPTPVQEKAIPPALDGRDILATAQT 73
Query: 445 GTGKTVVFSIIALEKLNLNN--GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMG 618
GTGKT+ F I ALE L G+QV+IL PTRE+A Q+ V +Q+ K + VMG
Sbjct: 74 GTGKTLAFIIPALEMLRDTEPCGVQVLILVPTRELAMQVHGVYEQL-KGKKLKSAALVMG 132
Query: 619 GLSVNEXI 642
G S I
Sbjct: 133 GTSERNQI 140
>UniRef50_Q5KN79 Cluster: ATP-dependent RNA helicase DBP4; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP4 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 859
Score = 72.5 bits (170), Expect = 8e-12
Identities = 53/170 (31%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Frame = +1
Query: 145 NEKSQRTLAEPSNISESN-QPLFKDSRLSELPLCL*PHDIRNSTRTRDVQIVENVTFTSM 321
N+ S ++ A+ N QP K ++L L + ++++ V E F+ +
Sbjct: 7 NQGSSKSQAKQKGTKGKNAQPRLKSNQLKRLKINEELKELQSRV-DNFVPPSEITLFSEL 65
Query: 322 LLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN 501
+S T GL SS F P+PIQ +P D+L AK+G+GKT+ F I LE+L L
Sbjct: 66 PMSSKTQKGLKSSHFLNPTPIQSLAIPPALQARDILGSAKTGSGKTLAFLIPLLERLYLE 125
Query: 502 -----NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNE 636
+GL ++++PTRE+A Q ++ IG +H + V+GG + E
Sbjct: 126 KWGPMDGLGAVVISPTRELAVQTFMQLRDIGKYH-NFSAGLVIGGKPLKE 174
>UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio
"Eukaryotic translation initiation factor 4A, isoform
1A.; n=1; Takifugu rubripes|Rep: Homolog of Brachydanio
rerio "Eukaryotic translation initiation factor 4A,
isoform 1A. - Takifugu rubripes
Length = 357
Score = 72.1 bits (169), Expect = 1e-11
Identities = 36/88 (40%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Frame = +1
Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 486
+F M+L+E L G+ + GF+KPS IQ + GFD++ +++SGTGKT + I AL+
Sbjct: 22 SFEGMMLNENLLRGIFAYGFEKPSAIQQQAIVPCIKGFDVIAQSQSGTGKTATYVIAALQ 81
Query: 487 KLN-LNNGLQVMILTPTREIAAQICDVI 567
+++ + Q +IL PTRE+A QI V+
Sbjct: 82 RIDMMKEDTQAIILAPTRELANQIQKVV 109
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 72.1 bits (169), Expect = 1e-11
Identities = 43/118 (36%), Positives = 64/118 (54%), Gaps = 1/118 (0%)
Frame = +1
Query: 295 VENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 474
V + TF + L L L + G++ PS IQ +P G D+L +A++GTGKT F++
Sbjct: 6 VASPTFAELSLPSTILSTLETLGYETPSLIQAKTIPALLEGRDVLGQAQTGTGKTAAFAL 65
Query: 475 IALEKLNL-NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXIA 645
L +L+L QV++L PTRE+A Q+ Q G KGL V + GG E ++
Sbjct: 66 PLLSRLDLQRREPQVLVLAPTRELAQQVAASFVQYGRGVKGLEVLSLCGGQEYREQLS 123
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 72.1 bits (169), Expect = 1e-11
Identities = 41/109 (37%), Positives = 61/109 (55%), Gaps = 1/109 (0%)
Frame = +1
Query: 298 ENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSII 477
+NV F + L + L + ++G++KP+PIQ + + G D L+ AK+GTGKT F+I
Sbjct: 3 KNVQFQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAKTGTGKTAAFAIP 62
Query: 478 ALEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
AL+ L QV+ILTP RE+ QI ++G + V V GG
Sbjct: 63 ALQHLRAEVQHPQVLILTPGRELCKQISQEFIKLGKGLENFRVAEVTGG 111
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 72.1 bits (169), Expect = 1e-11
Identities = 41/120 (34%), Positives = 67/120 (55%), Gaps = 5/120 (4%)
Frame = +1
Query: 304 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 483
++F+S+ LS + G+ PSPIQ +P G D++ A++GTGKT F++ L
Sbjct: 1 MSFSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLL 60
Query: 484 EKLNLNN-----GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXIAK 648
E L+ N ++ ++LTPTRE+AAQ+ + ++ G + L V GG+ +N I K
Sbjct: 61 ELLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGK-YLPLRSAVVFGGVPINPQIQK 119
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 71.7 bits (168), Expect = 1e-11
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F + LS L L S G++ PSPIQ + D++ +A++GTGKT F + L+K
Sbjct: 14 FERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNNKDIIGQAQTGTGKTAAFVLPLLDK 73
Query: 490 LNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLS 627
+NLN N Q++IL PTRE+A Q+ + ++ KG +V + GG S
Sbjct: 74 INLNINAPQLLILAPTRELAIQVSEAVQTYARGMKGFHVLPIYGGQS 120
>UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 28 - Arabidopsis thaliana (Mouse-ear cress)
Length = 789
Score = 71.7 bits (168), Expect = 1e-11
Identities = 43/114 (37%), Positives = 64/114 (56%), Gaps = 4/114 (3%)
Frame = +1
Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 486
TF + LS L + G++KP+PIQ +PL G DL A +G+GKT F++ LE
Sbjct: 168 TFMELNLSRPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLE 227
Query: 487 KLNLNN----GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNE 636
+L +V+ILTPTRE+A QI +I+ + + + ++GGLSV E
Sbjct: 228 RLLFRPKRVFATRVLILTPTRELAVQIHSMIQNL-AQFTDIKCGLIVGGLSVRE 280
>UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;
Eukaryota|Rep: ATP-dependent RNA helicase DDX39 - Homo
sapiens (Human)
Length = 427
Score = 71.7 bits (168), Expect = 1e-11
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F LL L ++ GF+ PS +Q +P G D+L +AKSG GKT VF + L++
Sbjct: 46 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 105
Query: 490 LNLNNG-LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNE 636
+ NG + V+++ TRE+A QI ++ + + V GGLS+ +
Sbjct: 106 IEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKK 155
>UniRef50_Q9PPQ7 Cluster: ATP-dependent RNA helicase; n=1;
Ureaplasma parvum|Rep: ATP-dependent RNA helicase -
Ureaplasma parvum (Ureaplasma urealyticum biotype 1)
Length = 443
Score = 71.3 bits (167), Expect = 2e-11
Identities = 40/104 (38%), Positives = 63/104 (60%)
Frame = +1
Query: 331 EFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGL 510
++ L LI+ +P+PIQL +PL +++ A +GTGKT+ F + L L+L+ L
Sbjct: 9 KWILDSLINQKIFEPTPIQLKTMPLIAKRENIIGVAPTGTGKTLAFVLPILNNLDLSQKL 68
Query: 511 QVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 642
QV+I+TPTRE+A QI I H L V+ ++GG S+++ I
Sbjct: 69 QVIIITPTRELARQIFSKIIVFKKHQPLLQVKMLIGGESIDQQI 112
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 71.3 bits (167), Expect = 2e-11
Identities = 37/119 (31%), Positives = 65/119 (54%), Gaps = 3/119 (2%)
Frame = +1
Query: 295 VENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 474
+ N+ F + L E L + GF++PS IQ +P+ G D++ +A++GTGKT F
Sbjct: 1 MNNIKFDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAFGC 60
Query: 475 IALEKLNLN---NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 642
+ + + + +IL PTRE+A Q+ + + ++G H K L+V + GG ++ I
Sbjct: 61 AIINNADFSGKKKSPKALILAPTRELAIQVNEELVRLGKHEK-LSVLPIYGGQPIDRQI 118
>UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH
family; n=2; Desulfovibrio vulgaris subsp. vulgaris|Rep:
ATP-dependent RNA helicase, DEAD/DEAH family -
Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB8303)
Length = 532
Score = 71.3 bits (167), Expect = 2e-11
Identities = 35/106 (33%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Frame = +1
Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 486
+F + L E L + GF +PSPIQ +P G D++ +A++GTGKT F + L+
Sbjct: 6 SFKDLPLEEELLKAIEELGFTEPSPIQSIAIPRLLEGRDVIGQAQTGTGKTAAFGLPLLQ 65
Query: 487 KLN-LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
+++ + +Q ++L PTRE+A Q+ + + + H +G+ + V GG
Sbjct: 66 RIDAADRSVQALVLCPTRELALQVANGLTALAKHLRGVRILSVYGG 111
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 71.3 bits (167), Expect = 2e-11
Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 2/113 (1%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F ++ L L + G++ P+PIQ +P G DLL +A++GTGKT F++ +EK
Sbjct: 53 FLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPLIEK 112
Query: 490 LNLNNGL--QVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 642
L N L +V+++TPTRE+A Q+ + K S + GG I
Sbjct: 113 LADNKELNAKVLVMTPTRELATQVAESFKSYSSESTNFKTIAIYGGTDYRNQI 165
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 71.3 bits (167), Expect = 2e-11
Identities = 36/114 (31%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Frame = +1
Query: 283 DVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTV 462
D E F ++ + L + + G+++PSPIQ +P+ G D++ +A++GTGKT
Sbjct: 16 DPMTQETGGFAALGIHPAVLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTA 75
Query: 463 VFSIIALEKLN-LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
F++ L +++ Q++IL PTRE+A Q+ + S G+ V V GG
Sbjct: 76 AFALPMLSRIDPARREPQLLILAPTRELALQVATAFETYASQLPGVGVVAVYGG 129
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 71.3 bits (167), Expect = 2e-11
Identities = 41/120 (34%), Positives = 67/120 (55%), Gaps = 5/120 (4%)
Frame = +1
Query: 304 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 483
++F+S+ LS + G+ PSPIQ +P G D++ A++GTGKT F++ L
Sbjct: 1 MSFSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLL 60
Query: 484 EKLNLNN-----GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXIAK 648
E L+ N ++ ++LTPTRE+AAQ+ + ++ G + L V GG+ +N I K
Sbjct: 61 ELLSKGNKAKAGQIRALVLTPTRELAAQVSESVETYGK-YLPLRSAVVFGGVPINPQIQK 119
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 71.3 bits (167), Expect = 2e-11
Identities = 40/116 (34%), Positives = 66/116 (56%), Gaps = 5/116 (4%)
Frame = +1
Query: 301 NVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 480
+++F + LS L + G+ +PS IQ +P G D++ A++GTGKT F++
Sbjct: 4 SMSFNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPL 63
Query: 481 LEKLN-----LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVN 633
LE L+ +N ++ ++LTPTRE+AAQ+ + +K G H L V GG+ +N
Sbjct: 64 LEILSKGENAQSNQVRALVLTPTRELAAQVAESVKNYG-QHLSLKSTVVFGGVKIN 118
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 71.3 bits (167), Expect = 2e-11
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F + +SE L S +P+P+QL +P D++ +A++GTGKT+ F + LE+
Sbjct: 5 FAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPILER 64
Query: 490 LNLNN-GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXIAK 648
+N+ +Q +I+TPTRE+A QI K++ + KG+N+ GG V + + K
Sbjct: 65 VNVEKPTIQALIITPTRELAIQITAETKKL-AEVKGINILAAYGGQDVEQQLRK 117
>UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila
melanogaster|Rep: CG6539-PA - Drosophila melanogaster
(Fruit fly)
Length = 1028
Score = 71.3 bits (167), Expect = 2e-11
Identities = 39/120 (32%), Positives = 61/120 (50%), Gaps = 1/120 (0%)
Frame = +1
Query: 274 RTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 453
R+ DV + TF + L L GL + F P+ IQ +P+ DL++++KSGTG
Sbjct: 15 RSSDVAPGQVKTFEELRLYRNLLNGLKRNNFVTPTKIQAAAIPMALAKMDLIIQSKSGTG 74
Query: 454 KTVVFSIIALEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSV 630
KT+++ I ++ N N N MI+ PTRE+A Q+ D + + +GG V
Sbjct: 75 KTLIYVIAVVQSFNPNINQPHAMIVVPTRELAIQVQDTFFHLCKSFRDFKCSAFIGGTDV 134
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 71.3 bits (167), Expect = 2e-11
Identities = 33/111 (29%), Positives = 60/111 (54%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F L + + +G+ +P+ +Q +P+ G DL++ +K+G+GKT + I +
Sbjct: 4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLVVRSKTGSGKTAAYLIPIINN 63
Query: 490 LNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 642
G++ +IL PTRE+A Q+ V + +G G+ V GG+S+N+ I
Sbjct: 64 TAKEKGIRALILLPTRELAVQVAKVSEALGK-RSGIRTVVVYGGVSINKQI 113
>UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1;
Ustilago maydis|Rep: ATP-dependent RNA helicase DBP4 -
Ustilago maydis (Smut fungus)
Length = 869
Score = 71.3 bits (167), Expect = 2e-11
Identities = 42/114 (36%), Positives = 68/114 (59%), Gaps = 5/114 (4%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE- 486
FT + LS+ T GL +G+ + IQ + L G D+L A++G+GKT+ F I LE
Sbjct: 60 FTQLPLSDRTCRGLKRAGYTDMTDIQAKSLSLSLKGKDVLGAARTGSGKTLAFLIPVLEI 119
Query: 487 ----KLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNE 636
K ++GL ++++PTRE+A QI +V+++IGS+H + V+GG V +
Sbjct: 120 LYRRKWGPSDGLGALVISPTRELAIQIFEVLRKIGSYHT-FSAGLVIGGKDVKQ 172
>UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14575, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 70.9 bits (166), Expect = 2e-11
Identities = 43/133 (32%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Frame = +1
Query: 256 DIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 435
D R R ++ + ++ F SM LS G++ G++ P+PIQ +P+ G D++
Sbjct: 21 DTREMVRAQNKKKKKSGGFQSMGLSFPVFKGVMRKGYKVPTPIQRKTIPVILDGKDVVAM 80
Query: 436 AKSGTGKTVVFSIIALEKL---NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVE 606
A++G+GKT F I E+L G + +IL+PTRE+A Q K++G K L
Sbjct: 81 ARTGSGKTAAFLIPMFERLKAPQAQTGARALILSPTRELALQTMKFTKELGKFTK-LKTA 139
Query: 607 XVMGGLSVNEXIA 645
++GG S+++ A
Sbjct: 140 LILGGDSMDDQFA 152
>UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=1; Carboxydothermus hydrogenoformans
Z-2901|Rep: ATP-dependent RNA helicase, DEAD box family
- Carboxydothermus hydrogenoformans (strain Z-2901 / DSM
6008)
Length = 430
Score = 70.9 bits (166), Expect = 2e-11
Identities = 34/94 (36%), Positives = 57/94 (60%)
Frame = +1
Query: 361 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNNGLQVMILTPTRE 540
GF+ P+PIQ +PL G +L+ +A +GTGKT + + L+++ QV+I+TPTRE
Sbjct: 21 GFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQRIQRGKKAQVLIVTPTRE 80
Query: 541 IAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 642
+A Q+ D + ++G + K + V GG ++ I
Sbjct: 81 LALQVADEVAKLGKYLK-VRALAVYGGQAIERQI 113
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 70.9 bits (166), Expect = 2e-11
Identities = 41/115 (35%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Frame = +1
Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 486
TF L+E L L S G+ PS +Q +P G +L++ +K+G+GKT F+I E
Sbjct: 4 TFEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCE 63
Query: 487 KLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXIAK 648
+N++ N +Q +I+ PTRE+A Q+ D I IG K + + G S+ + IA+
Sbjct: 64 NINVDYNNIQALIVVPTRELALQVKDEISDIG-RLKKVRCSAIFGKQSIKDQIAE 117
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 70.9 bits (166), Expect = 2e-11
Identities = 35/112 (31%), Positives = 63/112 (56%)
Frame = +1
Query: 295 VENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 474
+ +F + LS L L +GF+ P+PIQ +P G D++ A +GTGKT F +
Sbjct: 1 MSTTSFAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLL 60
Query: 475 IALEKLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSV 630
+++L G + ++L PTRE+A QI + +++ G H + + ++GG+ +
Sbjct: 61 PLIDRLAGKPGTRALVLAPTRELALQIGEELERFG-HARRVRGAVIIGGVGM 111
>UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep:
RNA helicase - Guillardia theta (Cryptomonas phi)
Length = 381
Score = 70.9 bits (166), Expect = 2e-11
Identities = 37/104 (35%), Positives = 63/104 (60%), Gaps = 1/104 (0%)
Frame = +1
Query: 298 ENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSII 477
EN+ F + L L GL G++ PS IQ +PL D+L +K+GTGKT+ F I
Sbjct: 13 ENLKFKDLKLKNDLLLGLNDLGYEHPSLIQEKIIPLAINNKDILARSKNGTGKTLSFLIP 72
Query: 478 ALEKL-NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVE 606
L+ + + + G++ +IL PTRE+A QI +++++ + K +N++
Sbjct: 73 ILQNIYSESYGIESIILVPTRELALQISSLLRKLSKYMKNINLQ 116
>UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 784
Score = 70.9 bits (166), Expect = 2e-11
Identities = 44/115 (38%), Positives = 65/115 (56%), Gaps = 3/115 (2%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F +M LS L ++ G++ P+PIQ +PL G D++ AK+G+GKT F I EK
Sbjct: 40 FQAMGLSMPILKAILKMGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTGCFLIPLFEK 99
Query: 490 L---NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXIA 645
L + +G + ++LTPTRE+A Q IKQ+G L V+GG S++ A
Sbjct: 100 LKQREIKSGARALVLTPTRELAIQTFKFIKQLGK-FTDLKTILVLGGDSMDSQFA 153
>UniRef50_A2DVG1 Cluster: DEAD/DEAH box helicase family protein;
n=3; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 478
Score = 70.9 bits (166), Expect = 2e-11
Identities = 43/107 (40%), Positives = 61/107 (57%), Gaps = 3/107 (2%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLH--GVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 483
F M L L G+ S GF+ PS IQ G ++ +A+SGTGKT FSI L
Sbjct: 93 FDQMDLPPALLQGVYSYGFRAPSEIQAIAIGAIRDPSNRHVIAQAQSGTGKTGAFSIGVL 152
Query: 484 EKLNLNNGL-QVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
K++++ Q ++L PTRE+A QI +V K+IGS GL++ +GG
Sbjct: 153 SKIDVSQKTTQALVLAPTRELATQIFNVFKEIGSRIPGLDIAIFIGG 199
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 70.9 bits (166), Expect = 2e-11
Identities = 36/107 (33%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
Frame = +1
Query: 304 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 483
V FT + L+ + + GF++ +PIQ +PL G DL+ +A++GTGKT F I +
Sbjct: 2 VKFTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMV 61
Query: 484 EKLN-LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
E + + G+Q +++ PTRE+A Q+ + + +IG +G+ + GG
Sbjct: 62 EAIRPTSKGVQGLVVVPTRELAVQVAEELTRIGK-VRGIRSVAIYGG 107
>UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-dependent
RNA helicase; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ATP-dependent RNA helicase -
Ornithorhynchus anatinus
Length = 580
Score = 70.5 bits (165), Expect = 3e-11
Identities = 42/133 (31%), Positives = 73/133 (54%), Gaps = 3/133 (2%)
Frame = +1
Query: 256 DIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 435
D R R ++ + ++ F SM LS G++ G++ P+PIQ +P+ G D++
Sbjct: 134 DTRELVRVQNKKKKKSGGFQSMGLSYPVFKGVMKKGYKVPTPIQRKTIPVILDGKDVVAM 193
Query: 436 AKSGTGKTVVFSIIALEKLNLNN---GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVE 606
A++G+GKT F I EKL ++ G + ++L+PTRE+A Q K++G GL +
Sbjct: 194 ARTGSGKTACFLIPMFEKLKAHSAQAGARALVLSPTRELALQTGKFTKELGK-FTGLKMA 252
Query: 607 XVMGGLSVNEXIA 645
++GG + + A
Sbjct: 253 LILGGDRMEDQFA 265
>UniRef50_Q8SSD2 Cluster: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS; n=1; Encephalitozoon
cuniculi|Rep: ATP-DEPENDENT RNA HELICASE INVOLVED IN
mRNA EXPORT FROM THE NUCLEUS - Encephalitozoon cuniculi
Length = 425
Score = 70.5 bits (165), Expect = 3e-11
Identities = 33/86 (38%), Positives = 55/86 (63%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F+ M LS+ L + + GF+KPS IQ +P G ++++++KSGTGKT+ ++ L
Sbjct: 53 FSDMGLSDELLKAIYNQGFEKPSLIQKSAIPHILRGHNVVVQSKSGTGKTIAYTCGVLGN 112
Query: 490 LNLNNGLQVMILTPTREIAAQICDVI 567
+ QVM++TPTRE++ Q+ +VI
Sbjct: 113 TKIGERTQVMVVTPTRELSTQVTEVI 138
>UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellular
organisms|Rep: ATP-dependent RNA helicase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 778
Score = 69.3 bits (162), Expect(2) = 4e-11
Identities = 37/107 (34%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F + LSE L L G++ PSPIQ +PL D+L +A++GTGKT F++ L +
Sbjct: 9 FADLKLSEPLLRVLQELGYESPSPIQAATIPLLLNNRDVLGQAQTGTGKTASFALPILAR 68
Query: 490 LNLNNGL-QVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLS 627
+++ Q ++L PTRE+A Q+ + ++ ++ G +V + GG S
Sbjct: 69 IDIKQTTPQALVLAPTRELAIQVAEAFQRYATYIPGFHVLPIYGGQS 115
Score = 21.0 bits (42), Expect(2) = 4e-11
Identities = 9/16 (56%), Positives = 12/16 (75%)
Frame = +1
Query: 184 ISESNQPLFKDSRLSE 231
+SE + PLF D +LSE
Sbjct: 1 MSEPSFPLFADLKLSE 16
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 70.1 bits (164), Expect = 4e-11
Identities = 43/125 (34%), Positives = 66/125 (52%), Gaps = 5/125 (4%)
Frame = +1
Query: 283 DVQIVENVT-FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKT 459
D+ E+V F + L L L + G+++P+PIQ VP G DLL +A +GTGKT
Sbjct: 49 DIDPAEDVAGFAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGKT 108
Query: 460 VVFSIIALEKL----NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLS 627
F++ L +L ++G Q ++L PTRE+A Q+ + I + G G V V GG
Sbjct: 109 AAFALPLLHRLTDDRTGDHGPQALVLVPTRELAVQVSEAIHRYG-RDLGARVLPVYGGAP 167
Query: 628 VNEXI 642
+ +
Sbjct: 168 IGRQV 172
>UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55;
Eukaryota|Rep: Spliceosome RNA helicase BAT1 - Homo
sapiens (Human)
Length = 428
Score = 70.1 bits (164), Expect = 4e-11
Identities = 37/110 (33%), Positives = 58/110 (52%), Gaps = 1/110 (0%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F LL L ++ GF+ PS +Q +P G D+L +AKSG GKT VF + L++
Sbjct: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
Query: 490 LNLNNG-LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNE 636
L G + V+++ TRE+A QI ++ + + V GGLS+ +
Sbjct: 107 LEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKK 156
>UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;
n=27; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
15 - Arabidopsis thaliana (Mouse-ear cress)
Length = 427
Score = 70.1 bits (164), Expect = 4e-11
Identities = 35/108 (32%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F LL L ++ SGF+ PS +Q +P G D++ +AKSG GKT VF + L++
Sbjct: 48 FRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQ 107
Query: 490 LNLNNG-LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSV 630
+ + G + ++L TRE+A QIC+ + ++ V GG+++
Sbjct: 108 IEPSPGQVSALVLCHTRELAYQICNEFVRFSTYLPDTKVSVFYGGVNI 155
>UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DRS1 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 808
Score = 70.1 bits (164), Expect = 4e-11
Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 8/117 (6%)
Frame = +1
Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 486
+FT+M LS L L S F P+PIQ +PL G D+L A +G+GKT F + LE
Sbjct: 223 SFTAMNLSRPLLRALTSLQFTAPTPIQARAIPLALLGRDILGSAVTGSGKTAAFMVPILE 282
Query: 487 KLNLNN------GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVE--XVMGGLSVN 633
+L + +V++L PTRE+A Q C+ + + + GL+V ++GGLS+N
Sbjct: 283 RLCYRDRGKGGAACRVLVLCPTRELAVQ-CEAVGKALAEKGGLDVRFALLVGGLSLN 338
>UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;
Eukaryota|Rep: ATP-dependent RNA helicase DDX54 - Homo
sapiens (Human)
Length = 881
Score = 70.1 bits (164), Expect = 4e-11
Identities = 41/133 (30%), Positives = 72/133 (54%), Gaps = 3/133 (2%)
Frame = +1
Query: 256 DIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 435
D R R ++ + ++ F SM LS G++ G++ P+PIQ +P+ G D++
Sbjct: 80 DTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAM 139
Query: 436 AKSGTGKTVVFSIIALEKLNLNN---GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVE 606
A++G+GKT F + E+L ++ G + +IL+PTRE+A Q K++G GL
Sbjct: 140 ARTGSGKTACFLLPMFERLKTHSAQTGARALILSPTRELALQTLKFTKELGK-FTGLKTA 198
Query: 607 XVMGGLSVNEXIA 645
++GG + + A
Sbjct: 199 LILGGDRMEDQFA 211
>UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putative;
n=58; Proteobacteria|Rep: ATP-dependent RNA helicase
RhlE, putative - Burkholderia mallei (Pseudomonas
mallei)
Length = 516
Score = 54.0 bits (124), Expect(2) = 5e-11
Identities = 24/61 (39%), Positives = 39/61 (63%)
Frame = +1
Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 486
TF S+ LS + L ++G+ KP+P+Q +P G G DLL+ + +G+GKT F + A+E
Sbjct: 44 TFASLGLSPEIVSALQAAGYVKPTPVQQRAIPAGIAGRDLLVSSPTGSGKTAAFMLPAIE 103
Query: 487 K 489
+
Sbjct: 104 R 104
Score = 35.9 bits (79), Expect(2) = 5e-11
Identities = 13/43 (30%), Positives = 25/43 (58%)
Frame = +1
Query: 514 VMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 642
+++LTPTRE+A Q+ G H + L ++GG++ + +
Sbjct: 140 LLVLTPTRELAMQVTTAASTYGKHLRRLRTVSILGGVAYGQQL 182
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 69.7 bits (163), Expect = 6e-11
Identities = 37/99 (37%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Frame = +1
Query: 349 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMIL 525
L +G+++P+PIQ +PL G+D+L +A +GTGKT F+I +EKL ++ ++L
Sbjct: 15 LEDAGYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVEKLQKGKPDVKALVL 74
Query: 526 TPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 642
TPTRE+A Q+ + I + + +K L+ GG SV + +
Sbjct: 75 TPTRELAIQVKEQIYML-TKYKRLSSYVFYGGTSVKQNL 112
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 69.7 bits (163), Expect = 6e-11
Identities = 38/112 (33%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Frame = +1
Query: 301 NVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 480
N++F + +S+ + L GF P+ IQ +P G D++ ++++GTGKT FS+
Sbjct: 2 NLSFPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPI 61
Query: 481 LEKLN-LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVN 633
LE+L+ +Q ++LTPTRE+A Q+ D + Q + GL + GG S++
Sbjct: 62 LERLDPQQKAVQAIVLTPTRELAIQVHDAMAQFVG-NSGLRTLAIYGGQSID 112
>UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=25; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 450
Score = 69.7 bits (163), Expect = 6e-11
Identities = 39/114 (34%), Positives = 67/114 (58%), Gaps = 1/114 (0%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F + +SE L +G + +PIQ +P+ G D++ +AK+GTGKT+ F + LEK
Sbjct: 7 FLELGISETFNHTLRENGITEATPIQEKAIPVILSGKDIIGQAKTGTGKTLAFVLPILEK 66
Query: 490 LN-LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXIAK 648
++ ++ +Q +I+ PTRE+A QI IK++ + +NV + GG V + + K
Sbjct: 67 IDPESSDVQALIVAPTRELALQITTEIKKMLVQREDINVLAIYGGQDVAQQLRK 120
>UniRef50_A7P0R7 Cluster: Chromosome chr19 scaffold_4, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr19 scaffold_4, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 750
Score = 69.7 bits (163), Expect = 6e-11
Identities = 40/109 (36%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F + LS+ T+ GL S + + IQ +P CG D+L AK+G+GKT+ F I LEK
Sbjct: 72 FDRLPLSQKTIDGLKKSEYVTMTEIQRASLPHSLCGRDILGAAKTGSGKTLAFLIPVLEK 131
Query: 490 L-----NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
L +G+ +I++PTRE+ Q+ DV+K +G +H + ++GG
Sbjct: 132 LYRLRWGPEDGVGSIIISPTRELTGQLFDVLKSVGKYH-SFSAGLLIGG 179
>UniRef50_Q8D563 Cluster: Superfamily II DNA and RNA helicase; n=13;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 412
Score = 69.3 bits (162), Expect = 7e-11
Identities = 39/111 (35%), Positives = 62/111 (55%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F+++ LS + L F+KP+ IQ +P G DLL A +G+GKT+ + + LEK
Sbjct: 3 FSTLSLSSELIHAL-PKDFKKPTDIQALAIPELLAGQDLLALANTGSGKTLAYGLPLLEK 61
Query: 490 LNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 642
L +N + +IL P RE+A Q+ + I Q+G GLN + GG+ + +
Sbjct: 62 LGVNPEQKALILVPIRELATQVSEAINQVG-QALGLNAVCLCGGVDKEQQL 111
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 69.3 bits (162), Expect = 7e-11
Identities = 44/114 (38%), Positives = 65/114 (57%), Gaps = 2/114 (1%)
Frame = +1
Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCG-FDLLLEAKSGTGKTVVFSIIAL 483
+F ++ LS+ L L GF P+PIQ +P+ G D++ +A++GTGKT F I L
Sbjct: 3 SFKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPIL 62
Query: 484 EKLN-LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 642
E ++ + Q +IL PTRE+A Q+ + I I K LNV V GG S++ I
Sbjct: 63 ETIDESSRNTQALILAPTRELAIQVAEEIDSI-KGSKRLNVFPVYGGQSIDRQI 115
>UniRef50_Q27268 Cluster: ATP-dependent RNA helicase WM6; n=82;
Eukaryota|Rep: ATP-dependent RNA helicase WM6 -
Drosophila melanogaster (Fruit fly)
Length = 424
Score = 69.3 bits (162), Expect = 7e-11
Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F LL L ++ GF+ PS +Q +P G D+L +AKSG GKT VF + L++
Sbjct: 43 FRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQ 102
Query: 490 L--NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNE 636
L + NN V+++ TRE+A QI ++ + + V GG+++ +
Sbjct: 103 LEPSDNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQK 153
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 69.3 bits (162), Expect = 7e-11
Identities = 43/112 (38%), Positives = 62/112 (55%), Gaps = 4/112 (3%)
Frame = +1
Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 486
+F M LS L GL S GF KP+PIQ +P+ G D++ A +G+GKT F + LE
Sbjct: 277 SFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPILE 336
Query: 487 KLNLN----NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSV 630
+L +V++LTPTRE+A Q V ++ S H + +GGLS+
Sbjct: 337 RLLYRPKKVPTTRVVVLTPTRELAIQCHSVATKLAS-HTDIKFCLAVGGLSL 387
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 69.3 bits (162), Expect = 7e-11
Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Frame = +1
Query: 289 QIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF 468
Q EN++F M LS L + + GF++P+PIQ +P+G G D+ A +GTGKT F
Sbjct: 213 QYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAF 272
Query: 469 SIIALEKLNLNNG----LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSV 630
++ LE+L +V++L PTRE+ Q+ V +Q+ + + +GGL V
Sbjct: 273 ALPVLERLIYKPRQAPVTRVLVLVPTRELGIQVHSVTRQL-AQFCNITTCLAVGGLDV 329
>UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Yarrowia lipolytica (Candida lipolytica)
Length = 926
Score = 69.3 bits (162), Expect = 7e-11
Identities = 40/113 (35%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Frame = +1
Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 486
+F + LS+ L + GF++P+PIQ +PL G D++ A++G+GKT F + LE
Sbjct: 103 SFAGLGLSQLVLKNIARKGFKQPTPIQRKTIPLVLEGKDVVGMARTGSGKTAAFVLPMLE 162
Query: 487 KLNLNN---GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNE 636
KL +++ G + +IL+P+RE+A Q V+K S L + ++GG S+ E
Sbjct: 163 KLKVHSAKVGARAVILSPSRELALQTLKVVKDF-SAGTDLRLAMLVGGDSLEE 214
>UniRef50_Q9SB89 Cluster: DEAD-box ATP-dependent RNA helicase 27;
n=1; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 27 - Arabidopsis thaliana (Mouse-ear cress)
Length = 633
Score = 68.9 bits (161), Expect = 1e-10
Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Frame = +1
Query: 256 DIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 435
D + + I+ N TF S+ LS+ T + GF + + IQ +P G D+L
Sbjct: 138 DKEEEKKLEETSIMTNKTFESLSLSDNTYKSIKEMGFARMTQIQAKAIPPLMMGEDVLGA 197
Query: 436 AKSGTGKTVVFSIIALE-----KLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLN 600
A++G+GKT+ F I A+E K NG V+++ PTRE+A Q V K++ +H
Sbjct: 198 ARTGSGKTLAFLIPAVELLYRVKFTPRNGTGVLVICPTRELAIQSYGVAKELLKYH-SQT 256
Query: 601 VEXVMGG 621
V V+GG
Sbjct: 257 VGKVIGG 263
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 68.9 bits (161), Expect = 1e-10
Identities = 45/115 (39%), Positives = 63/115 (54%), Gaps = 4/115 (3%)
Frame = +1
Query: 298 ENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSII 477
E +F M LS L GL S GF KP+PIQ +P+ G D++ A +G+GKT F +
Sbjct: 291 EMSSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVP 350
Query: 478 ALEKLNLN----NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSV 630
LE+L +V+ILTPTRE+A Q V ++ S H + +GGLS+
Sbjct: 351 ILERLLYRPKKVPTTRVVILTPTRELAIQCHAVAVKLAS-HTDIKFCLAVGGLSL 404
>UniRef50_UPI0000499ECF Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 542
Score = 68.5 bits (160), Expect = 1e-10
Identities = 50/172 (29%), Positives = 85/172 (49%), Gaps = 7/172 (4%)
Frame = +1
Query: 133 ENYFNEKSQRTLAEPSNISESNQPLFKDSRLSELPLCL*PHDIRNSTRTRDV--QIVENV 306
EN NE+ E N E N+ + + E+ N +T+ + ++
Sbjct: 23 ENIENEEENEEENEEEN-EEENEEKQERTNKEEINQNKTKSKEENEEKTKGTTSSFLTDI 81
Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 486
+ S+ LSE L +G+ K + IQ +PL G D++ +A++G+GKT+ F I +E
Sbjct: 82 EYKSLNLSEEIQKALEEAGYTKMTTIQARSIPLLLMGKDIMAKARTGSGKTLAFLIPIVE 141
Query: 487 KLN-----LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLS 627
LN NG +I++PTRE+A Q DV+++I +H + ++GG S
Sbjct: 142 ILNKIHFQTRNGTGAIIISPTRELAIQTFDVLEKILAHSERTRT-LIIGGSS 192
>UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=16;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Shewanella denitrificans (strain OS217 / ATCC
BAA-1090 / DSM 15013)
Length = 433
Score = 68.5 bits (160), Expect = 1e-10
Identities = 37/113 (32%), Positives = 63/113 (55%), Gaps = 6/113 (5%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F S + L + G+Q +P+Q +P + G D+L A++GTGKT F++ L+K
Sbjct: 3 FESFSFAPEILRAIAECGYQNMTPVQQQAIPAIRRGEDVLASAQTGTGKTAAFALPILQK 62
Query: 490 LN------LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSV 630
++ ++ + +ILTPTRE+AAQ+ D I S H ++V + GG+ +
Sbjct: 63 MHERPMTVQHSNARALILTPTRELAAQVADNISAY-SKHMNISVLTIYGGMKM 114
>UniRef50_Q4N9Q9 Cluster: DEAD box RNA helicase, putative; n=3;
Piroplasmida|Rep: DEAD box RNA helicase, putative -
Theileria parva
Length = 501
Score = 68.5 bits (160), Expect = 1e-10
Identities = 38/96 (39%), Positives = 61/96 (63%), Gaps = 3/96 (3%)
Frame = +1
Query: 301 NVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPL--GKCGFDLLLEAKSGTGKTVVFSI 474
N+ ++ + LS L G+ + GF KPS IQ +PL G C +++ +AK+G+GKT F++
Sbjct: 98 NMQWSQLPLSPDLLKGIQNMGFAKPSKIQQCALPLILGSCT-NIIAQAKNGSGKTATFAL 156
Query: 475 IALEKLNLNNGL-QVMILTPTREIAAQICDVIKQIG 579
L K+N+N L Q + + PTRE+A Q VI+++G
Sbjct: 157 AMLSKVNVNVPLVQALCICPTRELATQNVQVIQKLG 192
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 68.1 bits (159), Expect = 2e-10
Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 1/116 (0%)
Frame = +1
Query: 304 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 483
+TF + LS+ L L + F + + IQ +PL G ++ ++ +GTGKT F + L
Sbjct: 1 MTFKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPIL 60
Query: 484 EKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXIAK 648
EK+ N +Q +I+ PTRE+A QI + I+ GS + L + ++GG + + I +
Sbjct: 61 EKIEPNKRRVQAVIMAPTRELAMQIVNQIRIFGSRIENLVIAPLIGGADMRDQIKR 116
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 68.1 bits (159), Expect = 2e-10
Identities = 36/119 (30%), Positives = 66/119 (55%), Gaps = 1/119 (0%)
Frame = +1
Query: 295 VENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 474
V +F + LSE + G+++P+P+Q+ + G D+++ +K+GTGKT F+I
Sbjct: 17 VSQASFDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSKTGTGKTAAFAI 76
Query: 475 IALEKL-NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXIAK 648
LE++ + +++ PTRE+A Q+ + + H+ L+V V GG S+ E + K
Sbjct: 77 PILERIADGRRRPSALVMCPTRELAIQVAQEFTAL-AKHRDLSVVAVYGGASMGEQLQK 134
>UniRef50_A0BPV0 Cluster: Chromosome undetermined scaffold_12, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_12,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 471
Score = 68.1 bits (159), Expect = 2e-10
Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 3/117 (2%)
Frame = +1
Query: 280 RDVQIVE-NVT-FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 453
+D+QI NV+ F + L E L + +GF+ P+ +Q + G L+ +AK+GTG
Sbjct: 63 KDIQIDNYNVSQFKNFGLKEELLRAVKEAGFEHPTRVQAESLTNALLGEQLICQAKAGTG 122
Query: 454 KTVVFSIIALEKLNL-NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
KT VF + L +N +N ++ +++T TRE+A Q D ++G K + VE GG
Sbjct: 123 KTAVFVLTVLNTINTESNKVECLVITHTRELAQQARDEFLRLGKFMKSVKVECFYGG 179
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 68.1 bits (159), Expect = 2e-10
Identities = 36/107 (33%), Positives = 61/107 (57%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F + + + L L GF+K PIQ +P+ G D++ +A +GTGKT +SI L++
Sbjct: 4 FEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVGQAHTGTGKTGAYSISMLQE 63
Query: 490 LNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSV 630
+ G+Q +I+ PTRE+A QI + +K+ + K + + GG S+
Sbjct: 64 IKEGGGIQGLIVAPTRELAVQITEEVKKFAKYTK-VRPVAIYGGQSM 109
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 68.1 bits (159), Expect = 2e-10
Identities = 35/108 (32%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
Frame = +1
Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 486
TF + + L + G++ P+ IQ +P G D++ A++GTGKT F+I L
Sbjct: 14 TFADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLS 73
Query: 487 KLNLNNGL-QVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLS 627
K+++ + + Q ++L PTRE+A Q+ + + G++ LNV + GG S
Sbjct: 74 KIDITSKVPQALVLVPTRELALQVAEAFGRYGAYLSQLNVLPIYGGSS 121
>UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog;
n=20; Pasteurellaceae|Rep: Cold-shock DEAD box protein A
homolog - Haemophilus influenzae
Length = 613
Score = 68.1 bits (159), Expect = 2e-10
Identities = 35/111 (31%), Positives = 62/111 (55%), Gaps = 1/111 (0%)
Frame = +1
Query: 292 IVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFS 471
+ + +TF + L EF L + GF+ PSPIQ +P G D+L A++G+GKT F+
Sbjct: 1 MTDKITFNDLGLPEFILKAVSDLGFETPSPIQQSCIPHLLNGNDVLGMAQTGSGKTAAFA 60
Query: 472 IIALEKLN-LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
+ L +++ Q++++ PTRE+A Q+ D + + +G + + GG
Sbjct: 61 LPLLAQIDPSEKHPQMLVMAPTRELAIQVADACELFVKYAQGTRIVTLYGG 111
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 67.7 bits (158), Expect = 2e-10
Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
FT M + L L GF+KP+ IQ +P G D++ +A++GTGKT F+I L
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEGKDIIGQAQTGTGKTAAFAIPILSN 62
Query: 490 LNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLS 627
L+ + N +Q +++ PTRE+A QI D + +G + + ++GG+S
Sbjct: 63 LDCSINRIQHLVIAPTRELANQIYDQLNILGKYTCS-KIALILGGVS 108
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 67.7 bits (158), Expect = 2e-10
Identities = 33/107 (30%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F+ + L++ + +I G++ P+PIQ + +P G D+L +A++GTGKT F++ +
Sbjct: 9 FSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLINN 68
Query: 490 LNL---NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
++L + QV++L PTRE+A Q+ + + + L+V + GG
Sbjct: 69 MDLASRDRAPQVLVLAPTRELAIQVAEQFEAFAKNVPNLDVACIYGG 115
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 67.7 bits (158), Expect = 2e-10
Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 4/119 (3%)
Frame = +1
Query: 304 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 483
+TF + L++ L L G++KPSPIQ +P G D+L A++GTGKT F+ L
Sbjct: 1 MTFRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPIL 60
Query: 484 EKLN----LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXIAK 648
++L ++ +ILTPTRE+A QI + + G H L + GG+ + K
Sbjct: 61 QRLGGDIPAGRPIRSLILTPTRELALQIQESFEAYGK-HLPLRSAVIFGGVGQQPQVDK 118
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 67.7 bits (158), Expect = 2e-10
Identities = 40/127 (31%), Positives = 68/127 (53%), Gaps = 4/127 (3%)
Frame = +1
Query: 259 IRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEA 438
++++ + + + E TF + LS L + GF +P+PIQ +PL G D+L A
Sbjct: 175 LQSNRKLKKIVEEELPTFEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASA 234
Query: 439 KSGTGKTVVFSIIALEKLNLNN----GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVE 606
+G+GKT F + LE+L + ++V+IL PTRE+A Q C + + + +
Sbjct: 235 STGSGKTAAFLLPVLERLLFRDSEYRAIRVLILLPTRELALQ-CQSVMENLAQFSNITSC 293
Query: 607 XVMGGLS 627
++GGLS
Sbjct: 294 LIVGGLS 300
>UniRef50_O74393 Cluster: ATP-dependent RNA helicase mak5; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase mak5 - Schizosaccharomyces pombe (Fission
yeast)
Length = 648
Score = 67.7 bits (158), Expect = 2e-10
Identities = 40/107 (37%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Frame = +1
Query: 325 LSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN- 501
LS L L +GF KP PIQ +P GFD++ +A +G+GKT+ F I LE N
Sbjct: 129 LSPEMLGSLSKAGFSKPMPIQSLVIPEASIGFDIIGKADTGSGKTLAFGIPILEHCLRNV 188
Query: 502 --NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNE 636
+Q +++ PTRE+A QIC + I + V + GGL+V +
Sbjct: 189 DAKYVQALVVAPTRELAHQICQHFELI-KPSPNIRVMSITGGLAVQK 234
>UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helicase
protein; n=1; Methylophilales bacterium HTCC2181|Rep:
putative ATP-dependent RNA helicase protein -
Methylophilales bacterium HTCC2181
Length = 427
Score = 67.3 bits (157), Expect = 3e-10
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 4/112 (3%)
Frame = +1
Query: 304 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 483
++F + L L + +G+ +P+PIQ +P +L A++GTGKT F + L
Sbjct: 1 MSFQTFNLDASILKAIQEAGYDQPTPIQTKSIPEIMLNKHVLASAQTGTGKTAAFVLPIL 60
Query: 484 EKLNLN----NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLS 627
+KL N G +V+I++PTRE+A QI D IK+ S + +N + GG+S
Sbjct: 61 DKLTKNRSEGRGPRVLIVSPTRELATQITDSIKKY-SRYLRINSITITGGIS 111
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 67.3 bits (157), Expect = 3e-10
Identities = 34/111 (30%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F SM L++ TL G++ G++ P+PIQ +P G D++ A++G+GKT + + + +
Sbjct: 15 FQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMARTGSGKTAAYLVPIINR 74
Query: 490 LNLNN--GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNE 636
L ++ G++ +I+ PTRE+A Q V ++G L ++GG +++
Sbjct: 75 LETHSTEGVRSLIICPTRELALQTIKVFNELGK-LTNLKASLIIGGSKLSD 124
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 67.3 bits (157), Expect = 3e-10
Identities = 34/117 (29%), Positives = 64/117 (54%), Gaps = 1/117 (0%)
Frame = +1
Query: 295 VENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 474
++ + F+ + LS ++ GF++ SPIQ +P+ G D++ A++GTGKT F+I
Sbjct: 6 MKKLKFSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAI 65
Query: 475 IALEKLNL-NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 642
+E L + + LQ +IL PTRE+ Q+ + +++ + V + GG + +
Sbjct: 66 PTIELLEVESKHLQALILCPTRELVIQVSEQFRKLIKYKGNFEVVPIYGGQEIERQL 122
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 67.3 bits (157), Expect = 3e-10
Identities = 43/124 (34%), Positives = 70/124 (56%), Gaps = 9/124 (7%)
Frame = +1
Query: 304 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 483
++F S+ LS L + G+++P+PIQ +P G DL+ A++GTGKT F++ L
Sbjct: 1 MSFDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLL 60
Query: 484 EKL-------NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEX--VMGGLSVNE 636
+ L ++ +ILTPTRE+AAQI + ++ + K LN+ V GG+S+N
Sbjct: 61 QHLITRQPHAKGRRPVRALILTPTRELAAQIGENVR---DYSKYLNIRSLVVFGGVSINP 117
Query: 637 XIAK 648
+ K
Sbjct: 118 QMMK 121
>UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome
shotgun sequence; n=5; Euteleostomi|Rep: Chromosome 15
SCAF14542, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 366
Score = 66.9 bits (156), Expect = 4e-10
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Frame = +1
Query: 289 QIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF 468
+I +N F M L E L G+ + GF+KPS IQ + G+D++ +A+SGTGKT F
Sbjct: 32 EITDN--FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATF 89
Query: 469 SIIALEKLNLN-NGLQVMILTPTREIAAQ 552
+I L++L ++ Q ++L PTRE+A Q
Sbjct: 90 AISILQQLEIDQKETQALVLAPTRELAQQ 118
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 66.9 bits (156), Expect = 4e-10
Identities = 41/115 (35%), Positives = 67/115 (58%), Gaps = 6/115 (5%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F+ + LS+ L L G+ P+PIQ +P G DLL A++GTGKT F + ++++
Sbjct: 4 FSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSIDR 63
Query: 490 L-NLNNGL-----QVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNE 636
L +N + ++++L PTRE+ +QI K G+ GL V+ ++GG SVN+
Sbjct: 64 LREADNRIPFKSCRMLVLAPTRELVSQIAASAKDYGA-LAGLKVQSIVGGTSVNK 117
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 66.9 bits (156), Expect = 4e-10
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 1/110 (0%)
Frame = +1
Query: 295 VENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 474
+ ++F + L L + + G++ PSPIQ +P G LL A++GTGKT F++
Sbjct: 21 MSELSFAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQTGTGKTAAFAL 80
Query: 475 IALEKLNLNNG-LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
L +++ N Q+++L PTRE+A Q+ + S + +V + GG
Sbjct: 81 PLLSRIDANVAEPQILVLAPTRELAIQVAEAFTTYASKFRNFHVLPIYGG 130
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 66.9 bits (156), Expect = 4e-10
Identities = 35/112 (31%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F S+ L +F L S G++ +PIQ +PL G D++ A++GTGKT F++ L
Sbjct: 11 FNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFALPILAN 70
Query: 490 LNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 642
+++ Q ++L PTRE+A Q+ + + G GL + + GG + + +
Sbjct: 71 IDVKVRSPQALVLCPTRELAQQVAEAFRSYGRGMGGLRILSIFGGADMRQQL 122
>UniRef50_Q59H21 Cluster: ATP-dependent RNA helicase ROK1 isoform a
variant; n=3; Tetrapoda|Rep: ATP-dependent RNA helicase
ROK1 isoform a variant - Homo sapiens (Human)
Length = 512
Score = 66.9 bits (156), Expect = 4e-10
Identities = 32/74 (43%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Frame = +1
Query: 340 LXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN--LNNGLQ 513
L ++ +GFQ P+PIQ+ +P+ G +LL A +G+GKT+ FSI L +L N G +
Sbjct: 176 LQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKGFR 235
Query: 514 VMILTPTREIAAQI 555
+I++PTRE+A+QI
Sbjct: 236 ALIISPTRELASQI 249
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 66.9 bits (156), Expect = 4e-10
Identities = 37/117 (31%), Positives = 65/117 (55%), Gaps = 1/117 (0%)
Frame = +1
Query: 295 VENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 474
+E + F + +S + GF++ SPIQ +P D+ +A++GTGKT F I
Sbjct: 1 MEKLKFKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGI 60
Query: 475 IALEKLNL-NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 642
LE ++ +N LQ +IL PTRE+A Q+ + ++++ + ++V V GG ++ I
Sbjct: 61 PLLENIDSEDNNLQAIILCPTRELAIQVAEELRKLSVYLPKIDVLPVYGGQPIDRQI 117
>UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82;
Proteobacteria|Rep: ATP-dependent RNA helicase srmB -
Escherichia coli (strain K12)
Length = 444
Score = 66.9 bits (156), Expect = 4e-10
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 5/112 (4%)
Frame = +1
Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 486
TF+ + L E L L GF +P+ IQ +P G D+L A +GTGKT + + AL+
Sbjct: 5 TFSELELDESLLEALQDKGFTRPTAIQAAAIPPALDGRDVLGSAPTGTGKTAAYLLPALQ 64
Query: 487 KL-----NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLS 627
L + +++ILTPTRE+A Q+ D +++ + H L++ + GG++
Sbjct: 65 HLLDFPRKKSGPPRILILTPTRELAMQVSDHAREL-AKHTHLDIATITGGVA 115
>UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;
n=3; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 29 - Oryza sativa subsp. japonica (Rice)
Length = 851
Score = 66.9 bits (156), Expect = 4e-10
Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F SM L E G+ G++ P+PIQ +PL G D+ A++G+GKT F + +++
Sbjct: 51 FESMGLCEEVYRGVRHKGYRVPTPIQRKAMPLILAGHDIAAMARTGSGKTAAFLVPMIQR 110
Query: 490 LNLNN---GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSV 630
L ++ G++ +IL+PTR++A Q +Q+G L + ++GG S+
Sbjct: 111 LRRHDAGAGIRALILSPTRDLATQTLKFAQQLGK-FTDLKISLIVGGDSM 159
>UniRef50_Q9Y2R4 Cluster: Probable ATP-dependent RNA helicase DDX52;
n=37; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX52 - Homo sapiens (Human)
Length = 599
Score = 66.9 bits (156), Expect = 4e-10
Identities = 32/74 (43%), Positives = 50/74 (67%), Gaps = 2/74 (2%)
Frame = +1
Query: 340 LXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN--LNNGLQ 513
L ++ +GFQ P+PIQ+ +P+ G +LL A +G+GKT+ FSI L +L N G +
Sbjct: 177 LQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLKQPANKGFR 236
Query: 514 VMILTPTREIAAQI 555
+I++PTRE+A+QI
Sbjct: 237 ALIISPTRELASQI 250
>UniRef50_A4RIF1 Cluster: ATP-dependent RNA helicase DBP5; n=7;
Ascomycota|Rep: ATP-dependent RNA helicase DBP5 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 504
Score = 66.9 bits (156), Expect = 4e-10
Identities = 40/118 (33%), Positives = 65/118 (55%), Gaps = 4/118 (3%)
Frame = +1
Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVP--LGKCGFDLLLEAKSGTGKTVVFSIIA 480
+F+ + L + + GL++ F+KPS IQ +P L +++ +++SGTGKT F +
Sbjct: 97 SFSELGLPQGIIDGLLAMNFKKPSKIQARALPLMLSNPPRNMIAQSQSGTGKTGAFVVTI 156
Query: 481 LEKLNLN--NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXIAK 648
L +++ N N Q + L P+RE+A QI VI+ IG GL V+ + G E K
Sbjct: 157 LSRVDFNQPNQPQALALAPSRELARQIQSVIQSIGQFCTGLVVDAAIPGAISRETGVK 214
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 66.9 bits (156), Expect = 4e-10
Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F SM L++ L + GF+ P+PIQ +PL G D++ A++G+GKT F I +E
Sbjct: 71 FQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEH 130
Query: 490 LN---LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNE 636
L N+ + +IL+P RE+A Q V+K S L ++GG+S+ E
Sbjct: 131 LKSTLANSNTRALILSPNRELALQTVKVVKDF-SKGTDLRSVAIVGGVSLEE 181
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 66.5 bits (155), Expect = 5e-10
Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F S+ LSE + + S G+++ + IQ +P G DL+ +AK+GTGKT F + L K
Sbjct: 6 FASLPLSEDLIKNVASLGYEEMTEIQELSLPAILDGKDLIAQAKTGTGKTAAFGLGVLSK 65
Query: 490 LNLNN-GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGL 624
L L++ +QV+IL PTRE+ Q+ I+ + + + + GG+
Sbjct: 66 LVLDDYRIQVLILCPTRELCEQVSKAIRDLARMMPNIKLLSLGGGM 111
>UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1;
uncultured candidate division OP8 bacterium|Rep:
Putative uncharacterized protein - uncultured candidate
division OP8 bacterium
Length = 453
Score = 66.1 bits (154), Expect = 7e-10
Identities = 36/109 (33%), Positives = 60/109 (55%), Gaps = 2/109 (1%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F+S+ L L L GF +P+PIQ +P G D++ A +G+GKT F + L +
Sbjct: 3 FSSLHLHPTLLKALKELGFPRPTPIQADAIPPAMSGRDVMASAVTGSGKTAAFLLPILHQ 62
Query: 490 L--NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSV 630
L + +++TPTRE+AAQI + + + + H ++ V GG+S+
Sbjct: 63 LIDRPRGTTRALVITPTRELAAQILEDLNDL-AVHTPISAAAVFGGVSI 110
>UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p -
Drosophila melanogaster (Fruit fly)
Length = 827
Score = 66.1 bits (154), Expect = 7e-10
Identities = 42/111 (37%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F SM L + G+ G++ P+PIQ +PL G D++ AK+G+GKT F I EK
Sbjct: 41 FQSMGLGFELIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEK 100
Query: 490 LNL---NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVN 633
L G + +IL+PTRE+A Q IK++G + L V+GG S++
Sbjct: 101 LQRREPTKGARALILSPTRELAVQTYKFIKELGRFME-LKSILVLGGDSMD 150
>UniRef50_Q89M45 Cluster: ATP-dependent RNA helicase; n=29; cellular
organisms|Rep: ATP-dependent RNA helicase -
Bradyrhizobium japonicum
Length = 500
Score = 65.7 bits (153), Expect = 9e-10
Identities = 42/119 (35%), Positives = 69/119 (57%), Gaps = 4/119 (3%)
Frame = +1
Query: 304 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF---SI 474
++F+++ LSE L + ++G+ P+PIQ +P D+L A++GTGKT F +
Sbjct: 1 MSFSNLGLSEKVLAAVAATGYTTPTPIQEQAIPHVLARKDVLGIAQTGTGKTAAFVLPML 60
Query: 475 IALEKLNLNNGL-QVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXIAK 648
LEK + + +IL PTRE+AAQ+ + + G+ K LNV ++GG+S + AK
Sbjct: 61 TILEKGRARARMPRTLILEPTRELAAQVKENFDRYGAGQK-LNVALLIGGVSFGDQDAK 118
>UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 1091
Score = 65.7 bits (153), Expect = 9e-10
Identities = 39/112 (34%), Positives = 65/112 (58%), Gaps = 3/112 (2%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F SM L++ L ++ GF P+PIQ +P+ G D++ A++G+GKT F I ++K
Sbjct: 232 FQSMDLTKNLLKAILKKGFNVPTPIQRKSIPMILDGHDIVGMARTGSGKTGAFVIPMIQK 291
Query: 490 LNLNN---GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNE 636
L ++ G++ +IL+PTRE+A Q V+K S L ++GG S+ +
Sbjct: 292 LGDHSTTVGVRAVILSPTRELAIQTFKVVKDF-SQGTQLRTILIVGGDSMED 342
>UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DHH1 - Encephalitozoon cuniculi
Length = 489
Score = 65.7 bits (153), Expect = 9e-10
Identities = 40/125 (32%), Positives = 69/125 (55%), Gaps = 1/125 (0%)
Frame = +1
Query: 277 TRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGK 456
+ DV+ E + + S+ L L + G+ PSP+Q+ +P G +LL+ +K+GTGK
Sbjct: 99 SEDVRETEGIGWESLGLGPVLLKRIRDIGYDFPSPVQVASIPHVLGGKNLLVRSKNGTGK 158
Query: 457 TVVFSIIALEKLNLNN-GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVN 633
T + + L +N + +Q +IL P RE+A QI +K++ S G+ V+GG S+
Sbjct: 159 TASYIVPMLNMINSSELSIQGIILVPIRELALQISRNVKRM-SEGTGVISAPVVGGTSMQ 217
Query: 634 EXIAK 648
+ I +
Sbjct: 218 DDIIR 222
>UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 782
Score = 65.3 bits (152), Expect = 1e-09
Identities = 40/109 (36%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
FT + LS TL GL S + + IQ + L G D+L AK+G+GKT+ F I +E
Sbjct: 43 FTDLPLSMQTLKGLKDSEYIDLTDIQRQSIGLALKGNDILGAAKTGSGKTLAFLIPVMEI 102
Query: 490 LNLN-----NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
L +GL +I+TPTRE+A QI + ++++G +H ++ ++GG
Sbjct: 103 LYCKQWTRLDGLGALIITPTRELAYQIYETLRKVGRYH-DISAGLIIGG 150
>UniRef50_A5FST0 Cluster: DEAD/DEAH box helicase domain protein;
n=8; Bacteria|Rep: DEAD/DEAH box helicase domain protein
- Dehalococcoides sp. BAV1
Length = 561
Score = 65.3 bits (152), Expect = 1e-09
Identities = 32/117 (27%), Positives = 69/117 (58%), Gaps = 2/117 (1%)
Frame = +1
Query: 304 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 483
++F S + G+ + G+++P+PIQ +P G D++ A++GTGKT +++ +
Sbjct: 1 MSFESFNFDPAVMAGVRACGYKEPTPIQAQAIPPIMAGHDVIGLAQTGTGKTAAYALPII 60
Query: 484 EK-LNLNNG-LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXIAK 648
+K L+ G ++ +++ PTRE+A QI D + +G + + + GG+++++ I +
Sbjct: 61 QKMLSTPRGRVRTLVIAPTRELACQISDSFRSLGQRAR-IRECSIYGGVNMDQQIRR 116
>UniRef50_A2DEZ7 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 546
Score = 65.3 bits (152), Expect = 1e-09
Identities = 37/113 (32%), Positives = 63/113 (55%), Gaps = 1/113 (0%)
Frame = +1
Query: 316 SMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN 495
S +LSE T+ L GF +P+Q P D+ +EA +G+GKT+ + + ++E +
Sbjct: 14 SEVLSEETINVLTKIGFPSMTPVQKSVTPYLLGHKDVAVEAVTGSGKTLAYLVPSMEYIK 73
Query: 496 LN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXIAKF 651
+ +GL V++L PTRE+A Q+ +V + I + + + V+GG V I F
Sbjct: 74 KSTDGLAVLVLVPTRELAQQVYEVAQSISAEFPAMVPQYVIGGSQVTADIETF 126
>UniRef50_Q0D622 Cluster: DEAD-box ATP-dependent RNA helicase 32;
n=4; Oryza sativa|Rep: DEAD-box ATP-dependent RNA
helicase 32 - Oryza sativa subsp. japonica (Rice)
Length = 773
Score = 65.3 bits (152), Expect = 1e-09
Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 5/108 (4%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F + LS T GL +G+ + S IQ +P CG D+L AK+G+GKT+ F I LEK
Sbjct: 82 FDELPLSNKTKDGLRKAGYTEMSEIQRAALPHALCGRDVLGAAKTGSGKTLAFVIPVLEK 141
Query: 490 L-----NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMG 618
L +G+ ++L+P +++A QI +V +++G H G + ++G
Sbjct: 142 LYRERWGPEDGVGCIVLSPNKDLAGQIFNVFQKVGKLH-GFSAACIVG 188
>UniRef50_Q9FFT9 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 32; n=1; Arabidopsis thaliana|Rep: Probable
DEAD-box ATP-dependent RNA helicase 32 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 739
Score = 65.3 bits (152), Expect = 1e-09
Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F + +S+ T GL + + + +Q +P CG D+L A++G+GKT+ F I LEK
Sbjct: 73 FAQLPISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPILEK 132
Query: 490 LNL-----NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
L+ +G+ +I++PTRE+AAQ V+ ++G HK + ++GG
Sbjct: 133 LHRERWSPEDGVGCIIISPTRELAAQTFGVLNKVGKFHK-FSAGLLIGG 180
>UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA
helicase 29; n=4; core eudicotyledons|Rep: Putative
DEAD-box ATP-dependent RNA helicase 29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 845
Score = 65.3 bits (152), Expect = 1e-09
Identities = 38/112 (33%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F S+ L + G++ P+PIQ +PL G D++ A++G+GKT F I LEK
Sbjct: 30 FESLNLGPNVFNAIKKKGYKVPTPIQRKTMPLILSGVDVVAMARTGSGKTAAFLIPMLEK 89
Query: 490 LNLN---NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNE 636
L + G++ +IL+PTR++A Q K++G L V ++GG S+ +
Sbjct: 90 LKQHVPQGGVRALILSPTRDLAEQTLKFTKELGK-FTDLRVSLLVGGDSMED 140
>UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=14; Eutheria|Rep: Probable ATP-dependent RNA helicase
DDX10 - Mus musculus (Mouse)
Length = 875
Score = 65.3 bits (152), Expect = 1e-09
Identities = 39/117 (33%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Frame = +1
Query: 286 VQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVV 465
+ + E F+ LS+ TL GL + ++ + IQ + L G D+L AK+G+GKT+
Sbjct: 63 INVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLA 122
Query: 466 FSIIALEKL-----NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
F + LE L +GL V+I++PTRE+A Q +V++++G +H + ++GG
Sbjct: 123 FLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNH-DFSAGLIIGG 178
>UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX10 - Homo sapiens (Human)
Length = 875
Score = 65.3 bits (152), Expect = 1e-09
Identities = 39/117 (33%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Frame = +1
Query: 286 VQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVV 465
+ + E F+ LS+ TL GL + ++ + IQ + L G D+L AK+G+GKT+
Sbjct: 63 INVNEITRFSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLA 122
Query: 466 FSIIALEKL-----NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
F + LE L +GL V+I++PTRE+A Q +V++++G +H + ++GG
Sbjct: 123 FLVPVLEALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNH-DFSAGLIIGG 178
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 64.9 bits (151), Expect = 2e-09
Identities = 36/105 (34%), Positives = 56/105 (53%), Gaps = 1/105 (0%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F S+ L L + G+++PSPIQ +P G D+L A++GTGKT F++ L +
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLPLLAR 67
Query: 490 L-NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
N QV++L PTRE+A Q+ ++ H + V + GG
Sbjct: 68 TQNEVREPQVLVLAPTRELAQQVAMAVESYSKHESNVKVASIYGG 112
>UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 732
Score = 64.9 bits (151), Expect = 2e-09
Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 5/112 (4%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE- 486
F LS TL GL + + KP+ IQ + G D++ AK+G+GKT+ I LE
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLEA 137
Query: 487 ----KLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSV 630
K + + GL +I++PTRE+A Q I +G+HH G + V+GG V
Sbjct: 138 LWRAKWSPDYGLGALIISPTRELALQTFSTINAVGAHH-GFSCGLVIGGSDV 188
>UniRef50_Q5CXB0 Cluster: CG6539/Dhh1-like SF II RNA helicase; n=3;
Cryptosporidium|Rep: CG6539/Dhh1-like SF II RNA helicase
- Cryptosporidium parvum Iowa II
Length = 581
Score = 64.9 bits (151), Expect = 2e-09
Identities = 45/136 (33%), Positives = 71/136 (52%), Gaps = 14/136 (10%)
Frame = +1
Query: 286 VQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVV 465
+++ N+ F+ L + L S+GF PSP+Q H + G +LL++AKSGTGKT+
Sbjct: 17 LKVSHNIRFSDFPLHRCLIDALFSNGFIFPSPVQYHILSQGAIEENLLVQAKSGTGKTIA 76
Query: 466 FSIIALEKL--NLNN---------GLQVMILTPTREIAAQICDVIKQIGSHHKGL-NVEX 609
F + L KL +L+N L+ + + PTREI QI I + K + +++
Sbjct: 77 FVLFILNKLLDSLDNCLERSSLCFELKSLFIAPTREICIQINKTISMFLNSIKDIYSIDS 136
Query: 610 V--MGGLSVNEXIAKF 651
V +GG + E KF
Sbjct: 137 VCCIGGSPIFEDFGKF 152
>UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 836
Score = 64.5 bits (150), Expect = 2e-09
Identities = 41/112 (36%), Positives = 61/112 (54%), Gaps = 4/112 (3%)
Frame = +1
Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 486
TF +M LS L + S F P+PIQ +P+ G D+ A +GTGKT + + LE
Sbjct: 155 TFYNMNLSRPLLKAVTSMNFVNPTPIQAATIPVALMGRDICGCAATGTGKTAAYMLPTLE 214
Query: 487 KL---NLNNGL-QVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSV 630
+L L+ + +V++L PTRE+ Q+ V KQ+ S + V +GGL V
Sbjct: 215 RLLYRPLDGAVTRVLVLVPTRELGVQVYQVTKQL-SQFTSVEVGLSVGGLDV 265
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 64.5 bits (150), Expect = 2e-09
Identities = 43/129 (33%), Positives = 67/129 (51%), Gaps = 5/129 (3%)
Frame = +1
Query: 259 IRNSTRTRDV-QIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 435
+ NS + D Q E++TF M LS L + + F +P+PIQ +P+G G D+
Sbjct: 165 VGNSGFSEDASQYDESLTFQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLGKDICAC 224
Query: 436 AKSGTGKTVVFSIIALEKLNLNNG----LQVMILTPTREIAAQICDVIKQIGSHHKGLNV 603
A +GTGKT F + LE+L +V++L PTRE+ Q+ V +Q+ + +
Sbjct: 225 AATGTGKTAAFMLPVLERLIYKPREAPVTRVLVLVPTRELGIQVHAVTRQLAQFTE-VTT 283
Query: 604 EXVMGGLSV 630
+GGL V
Sbjct: 284 CLAVGGLDV 292
>UniRef50_Q9KKW0 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=19; Vibrio cholerae|Rep: ATP-dependent RNA
helicase, DEAD box family - Vibrio cholerae
Length = 428
Score = 64.5 bits (150), Expect = 2e-09
Identities = 36/114 (31%), Positives = 63/114 (55%)
Frame = +1
Query: 295 VENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI 474
++ ++F+S+ LS + L +PS IQ +P G D+ A +G+GKT+ + +
Sbjct: 20 IQPMSFSSLALSADLIQAL-PKAITEPSAIQTLVIPAMLTGKDVFALANTGSGKTLAYGL 78
Query: 475 IALEKLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNE 636
LE+L + Q ++L PTRE+A Q+ +V+ +G+ GLN + GG+ E
Sbjct: 79 PLLERLKTSPEQQALVLVPTRELAMQVSEVLTHVGT-ALGLNTLCLCGGVDKTE 131
>UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 656
Score = 64.5 bits (150), Expect = 2e-09
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGF-DLLLEAKSGTGKTVVFSIIALE 486
F S LS + + GF P+PIQ +P+ G D + A +GTGKT F I +E
Sbjct: 46 FESFGLSAPVMAAMADMGFTTPTPIQRQALPILLAGANDFIGLASTGTGKTAAFGIPLIE 105
Query: 487 KLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 642
++ Q ++L+PTRE+A Q+ + + +G KG+ V + GG S I
Sbjct: 106 NIDSTVKDTQALVLSPTRELALQVAEQLTLLGK-KKGVRVVTIYGGASYRTQI 157
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 64.5 bits (150), Expect = 2e-09
Identities = 38/113 (33%), Positives = 61/113 (53%), Gaps = 2/113 (1%)
Frame = +1
Query: 304 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVP-LGKCGFDLLLEAKSGTGKTVVFSIIA 480
+TF + L+ L + GF+ PS IQ +P L D++ A++GTGKT F
Sbjct: 1 MTFDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAEDRDMVALAQTGTGKTAAFGFPL 60
Query: 481 LEKLNLNNGL-QVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNE 636
L+ ++ ++ Q +I+ PTRE+ QI + +K H KG+ V V GG ++ E
Sbjct: 61 LQNIDASSKTTQGLIIAPTRELCLQITNEMKLYAKHIKGVRVVAVYGGSNIQE 113
>UniRef50_Q55BR9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 508
Score = 64.5 bits (150), Expect = 2e-09
Identities = 39/107 (36%), Positives = 62/107 (57%), Gaps = 1/107 (0%)
Frame = +1
Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 486
TF + L+ + + GF+ PS IQ + +P G D++ AK+G+GKT F+I L
Sbjct: 5 TFEELGLTTWLVANCKQLGFKAPSNIQANTIPEILKGRDIIASAKTGSGKTASFAIPILN 64
Query: 487 KLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGL 624
+L+ + G+ +ILTPTRE+A QI + IG+ +N V+GG+
Sbjct: 65 QLSEDPYGVFAVILTPTRELAVQIGEQFNAIGA-PMNVNCSVVIGGI 110
>UniRef50_Q4Q8D5 Cluster: ATP-dependent RNA helicase, putative; n=6;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania major
Length = 900
Score = 64.5 bits (150), Expect = 2e-09
Identities = 53/161 (32%), Positives = 80/161 (49%), Gaps = 12/161 (7%)
Frame = +1
Query: 190 ESNQPLFKDSR--LSELPL-CL*PH----DIRNSTRTRDVQIVENVTFTSMLLSEFTLXG 348
+ Q KDSR + +L L C H DI S E FT + +S+ T G
Sbjct: 24 QERQERSKDSREEIDKLQLRCADMHRELKDIAESNEANTSTEHEYSKFTELPISQRTQMG 83
Query: 349 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL-----NLNNGLQ 513
L + +P+Q + L G D+L AK+G+GKT+ F I LE+L + + G+
Sbjct: 84 LERGHYTILTPVQKGTLHLALAGLDVLGAAKTGSGKTLCFVIPVLERLYRERWSSDMGVG 143
Query: 514 VMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNE 636
++L+PTRE+A QI V++ +G H L+ + GG V E
Sbjct: 144 ALLLSPTRELALQIFKVMQLVGYKHV-LSAALLTGGRDVQE 183
>UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=34; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX59 - Homo sapiens (Human)
Length = 619
Score = 64.5 bits (150), Expect = 2e-09
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 1/108 (0%)
Frame = +1
Query: 304 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI-IA 480
+ F L E L SG++ P+PIQ+ +P+G G D+L A +G+GKT F + +
Sbjct: 203 IDFEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVI 262
Query: 481 LEKLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGL 624
+ L + +ILTPTRE+A QI K++ S + ++GGL
Sbjct: 263 MRALFESKTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGL 310
>UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;
Coelomata|Rep: ATP-dependent RNA helicase DDX18 - Homo
sapiens (Human)
Length = 670
Score = 64.5 bits (150), Expect = 2e-09
Identities = 47/116 (40%), Positives = 68/116 (58%), Gaps = 8/116 (6%)
Frame = +1
Query: 298 ENVTFTSM--LLSEFTLXGLISSGFQKPSPIQLHGV-PLGKCGFDLLLEAKSGTGKTVVF 468
E+ +F S+ L++E TL + GF + IQ + PL + G DLL AK+G+GKT+ F
Sbjct: 175 EDTSFASLCNLVNENTLKAIKEMGFTNMTEIQHKSIRPLLE-GRDLLAAAKTGSGKTLAF 233
Query: 469 SIIALE---KLNL--NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
I A+E KL NG V+IL+PTRE+A Q V+K++ +HH +MGG
Sbjct: 234 LIPAVELIVKLRFMPRNGTGVLILSPTRELAMQTFGVLKELMTHHVH-TYGLIMGG 288
>UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DBP4 - Encephalitozoon cuniculi
Length = 452
Score = 64.5 bits (150), Expect = 2e-09
Identities = 36/118 (30%), Positives = 65/118 (55%), Gaps = 5/118 (4%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F + + + GL +GF +Q +P+ G D++ +++GTGKT+ F + L++
Sbjct: 6 FEDLKIDQRIEKGLRENGFVSMKEVQQKVIPMALEGHDIIGSSQTGTGKTLAFLVPTLQR 65
Query: 490 L-----NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXIAK 648
L +GL +++TPTRE+A QI DV+ +I + + L+ +MGGL + + K
Sbjct: 66 LVSLGWGGGDGLGCLVITPTRELALQIFDVLSRI-AKYTVLSTGLIMGGLEAEDELLK 122
>UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 2 SCAF15032, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 574
Score = 64.1 bits (149), Expect = 3e-09
Identities = 46/116 (39%), Positives = 68/116 (58%), Gaps = 8/116 (6%)
Frame = +1
Query: 298 ENVTFTSM--LLSEFTLXGLISSGFQKPSPIQLHGV-PLGKCGFDLLLEAKSGTGKTVVF 468
E+ +F S+ L+SE TL G+ GF+ + IQ + PL + G D+L AK+G+GKT+ F
Sbjct: 57 EDTSFASLAELVSENTLKGVKELGFEHMTEIQHKTIRPLLE-GRDVLAAAKTGSGKTLAF 115
Query: 469 SIIALE-----KLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
I +E K NG V+IL+PTRE+A Q V+K++ +HH +MGG
Sbjct: 116 LIPCIELIYKLKFMPRNGTGVIILSPTRELAMQTYGVMKELMTHHVH-TYGLIMGG 170
>UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1;
Thiomicrospira denitrificans ATCC 33889|Rep: DEAD/DEAH
box helicase-like - Thiomicrospira denitrificans (strain
ATCC 33889 / DSM 1351)
Length = 411
Score = 64.1 bits (149), Expect = 3e-09
Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 6/117 (5%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F+ + LS+ L L +GF KP+PIQ +PL D++ +A++G+GK+ F + LE
Sbjct: 3 FSKLGLSQNILQALKQNGFTKPTPIQERVIPLVLERHDIMAKAQTGSGKSASFILPILEL 62
Query: 490 LNLNN-----GLQVMILTPTREIAAQICDVIKQIGSH-HKGLNVEXVMGGLSVNEXI 642
L+ ++ ++V++LTPTRE+ QI + G+ K V V+GG + E +
Sbjct: 63 LSRDSYEGKAKIKVLVLTPTRELTQQIVEAFNTFGAFMSKKPKVVGVIGGEGIGEQL 119
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 64.1 bits (149), Expect = 3e-09
Identities = 37/116 (31%), Positives = 64/116 (55%), Gaps = 6/116 (5%)
Frame = +1
Query: 304 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 483
++F S+ LS+F L S G+++P+ IQ +P G DL+ A++G+GKT F + L
Sbjct: 1 MSFVSLGLSDFFTSTLSSLGYKEPTAIQDKAIPAVLKGHDLIAAAETGSGKTAGFVLPLL 60
Query: 484 EKLNL-----NNGLQVMILTPTREIAAQICDVIKQIGSH-HKGLNVEXVMGGLSVN 633
EKL+ NN ++L PTRE+A Q+ + + + + + + GG ++N
Sbjct: 61 EKLHSIPAPGNNLTHALVLVPTRELAVQVSQSVDRYSENCPRKIRSVAIYGGAAIN 116
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 64.1 bits (149), Expect = 3e-09
Identities = 33/109 (30%), Positives = 60/109 (55%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F S L + GL G++ + +Q VP+ + G D++ +A++G+GKT F + LE+
Sbjct: 7 FDSWELPDALRTGLAQLGWEFATQVQRDTVPIARQGTDVIGQARTGSGKTAAFGLPILER 66
Query: 490 LNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNE 636
+ LQ ++L PTRE+A Q+ + + + GL++ V GG + +
Sbjct: 67 CQPSGKLQALVLAPTRELANQVAQEFELL-QGNAGLSIVTVYGGTDLEK 114
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 64.1 bits (149), Expect = 3e-09
Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 9/139 (6%)
Frame = +1
Query: 256 DIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLE 435
DIR+ +T I+ N F+S+ L + L + G++ P+PIQ +P G DLL
Sbjct: 17 DIRSERKTT---IMSN-PFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAA 72
Query: 436 AKSGTGKTVVFSIIALEKLN---------LNNGLQVMILTPTREIAAQICDVIKQIGSHH 588
A++GTGKT F + +LE+L + +++++LTPTRE+A QI D Q +
Sbjct: 73 AQTGTGKTAAFMLPSLERLKRYATASTSPAMHPVRMLVLTPTRELADQI-DQNVQSYIKN 131
Query: 589 KGLNVEXVMGGLSVNEXIA 645
L + GG+++++ A
Sbjct: 132 LPLRHTVLFGGMNMDKQTA 150
>UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 343
Score = 63.7 bits (148), Expect = 4e-09
Identities = 31/92 (33%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F+ + L + G+ + G+ P+P+QL +P+ G DL+ A++GTGKT F++ L +
Sbjct: 3 FSKLGLPSSLVRGVQAMGYVDPTPVQLRAIPVVLAGRDLVASAQTGTGKTAAFALPVLAR 62
Query: 490 L--NLNNGLQVMILTPTREIAAQICDVIKQIG 579
L + G +V++L PTRE+ AQ+ + G
Sbjct: 63 LGGHRPGGPRVLVLEPTRELGAQVETAFRDFG 94
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 63.7 bits (148), Expect = 4e-09
Identities = 33/94 (35%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Frame = +1
Query: 361 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN--GLQVMILTPT 534
GF +P+PIQ +P G D++ +++G+GKT F I L+KL + G++ ++++PT
Sbjct: 43 GFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAAFVIPMLQKLKRRDTTGIRALMVSPT 102
Query: 535 REIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNE 636
RE+A Q V+K++G GL ++GG + E
Sbjct: 103 RELALQTFKVVKELG-RFTGLRCACLVGGDQIEE 135
>UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 685
Score = 63.7 bits (148), Expect = 4e-09
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 7/97 (7%)
Frame = +1
Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI---- 474
TF SM L L L GFQ PS +Q +PL G D+L +A++G+GKT +SI
Sbjct: 24 TFESMGLDNRILRALKKMGFQNPSLVQSKSIPLSLQGKDILAKARTGSGKTAAYSIPIIQ 83
Query: 475 ---IALEKLNLNNGLQVMILTPTREIAAQICDVIKQI 576
+A EK N+ G++ ++L PTRE+ Q+ + Q+
Sbjct: 84 KVLMAKEKSNI-KGVKAVVLVPTRELCEQVKNHFNQV 119
>UniRef50_A2EPG4 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 389
Score = 63.7 bits (148), Expect = 4e-09
Identities = 35/113 (30%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Frame = +1
Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 486
T+ SM L + + +G++KPSPIQ + + G +++ ++++G+GKT FSI L
Sbjct: 21 TWESMKLKPELIEAIKKNGWEKPSPIQQRAIYIISQGKNIMFQSQNGSGKTATFSIGTLA 80
Query: 487 KLNL-NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 642
+L L + +++I++PTRE+A Q + +K +G+ N +GG S+ +
Sbjct: 81 RLRLTSKTTELIIVSPTRELAIQTENTLKSLGA-----NTRACVGGNSLGADV 128
>UniRef50_Q97WT0 Cluster: ATP-dependent RNA helicase; n=4;
Sulfolobaceae|Rep: ATP-dependent RNA helicase -
Sulfolobus solfataricus
Length = 360
Score = 63.7 bits (148), Expect = 4e-09
Identities = 37/104 (35%), Positives = 63/104 (60%)
Frame = +1
Query: 325 LSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN 504
LSE L +G+ KP+ +Q +P G ++++AK+G+GKT + I LE+
Sbjct: 22 LSEDLRKALNEAGYIKPTRVQEVVIPELMNGKSVIVQAKTGSGKTAAYVIPILER----- 76
Query: 505 GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNE 636
+IL+PTRE+A QI D IK++G +K ++V ++GG+S ++
Sbjct: 77 NSTALILSPTRELATQILDEIKKLGK-YKQIDVSLIIGGMSYDD 119
>UniRef50_Q5KBP5 Cluster: ATP-dependent RNA helicase DBP5; n=3;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP5 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 546
Score = 63.7 bits (148), Expect = 4e-09
Identities = 41/117 (35%), Positives = 65/117 (55%), Gaps = 3/117 (2%)
Frame = +1
Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVP--LGKCGFDLLLEAKSGTGKTVVFSIIA 480
+F + L E + G+I++GFQKPS IQ +P L +L+ +++SGTGKT F++
Sbjct: 149 SFKELNLHEDLMKGIIAAGFQKPSKIQEKALPLLLSNPPRNLIGQSQSGTGKTAAFTLNM 208
Query: 481 LEKLNLNNGL-QVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXIAK 648
L +++ Q + + P+RE+A QI +VI QIG + + G S N I K
Sbjct: 209 LSRVDPTIPTPQAICIAPSRELARQIQEVIDQIGQFTQVGTFLAIPGSWSRNSRIDK 265
>UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole
genome shotgun sequence; n=2; Euteleostomi|Rep:
Chromosome undetermined SCAF9757, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 215
Score = 63.3 bits (147), Expect = 5e-09
Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Frame = +1
Query: 292 IVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFS 471
+V+N F M L E L G+ + GF+KPS IQ + G D++ +A+SGTGKT F
Sbjct: 28 VVDN--FDDMNLKESLLRGVYAYGFEKPSAIQQRAILPCIKGHDVIAQAQSGTGKTATFV 85
Query: 472 IIALEKLNLN-NGLQVMILTPTREIAAQ 552
I L++++ + Q +IL PTRE+A Q
Sbjct: 86 ISILQRIDTSLKETQALILAPTRELAQQ 113
>UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellular
organisms|Rep: ATP-dependent RNA helicase - Bdellovibrio
bacteriovorus
Length = 505
Score = 63.3 bits (147), Expect = 5e-09
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 6/117 (5%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
FT + L L +G++ P+PIQL +P+ G DLL A++GTGKT FS+ L+
Sbjct: 6 FTDLPLIAPLQFSLKEAGYETPTPIQLAAIPVILEGHDLLGIAQTGTGKTAAFSLPILQN 65
Query: 490 LNLN------NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 642
L+ + + +ILTPTRE+A QI + I+ S H + + GG+ N +
Sbjct: 66 LSKHTRKIEPKSPRCLILTPTRELAIQIHENIEAY-SKHLNMKHAVIFGGVGQNPQV 121
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 63.3 bits (147), Expect = 5e-09
Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Frame = +1
Query: 301 NVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 480
+V+F ++ L + L G+ KP+PIQ +P G DL A++GTGKT F++ +
Sbjct: 5 SVSFKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDLCGIAQTGTGKTAAFALPS 64
Query: 481 LEKLNLN------NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSV 630
+ L N G +++IL+PTRE+A+QI + H ++V V GG+ +
Sbjct: 65 IHYLATNPQARPQRGCRMLILSPTRELASQIARACNDY-TRHLRMSVNAVFGGVPI 119
>UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1;
Thiomicrospira crunogena XCL-2|Rep: ATP-dependent RNA
helicase - Thiomicrospira crunogena (strain XCL-2)
Length = 401
Score = 63.3 bits (147), Expect = 5e-09
Identities = 37/98 (37%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Frame = +1
Query: 304 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 483
+TF + L L + + KP+PIQ +P D+L A +GTGKT F + AL
Sbjct: 1 MTFEELDLDPKLLTAIEEQHYHKPTPIQAEAIPEMLLSKDVLAGAATGTGKTAAFVLPAL 60
Query: 484 EKL----NLNNGLQVMILTPTREIAAQICDVIKQIGSH 585
+ L + +V+IL PTRE+A QI V+KQ+G+H
Sbjct: 61 QFLLDDPRPSRKPRVLILAPTRELAFQIHKVVKQLGAH 98
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 63.3 bits (147), Expect = 5e-09
Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
FT L E + L + +P+PIQ +PL G D++ ++K+G+GKT F+I E
Sbjct: 6 FTQYKLCEEIIQALSMLHYIEPTPIQEKVIPLALEGKDIIAKSKTGSGKTAAFAIPICES 65
Query: 490 LNLNNGL-QVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
+ L Q ++L PTRE+A Q+ D I +G K + V V GG
Sbjct: 66 IVWEENLPQALVLEPTRELAYQVKDEIFNVG-RMKRVKVPVVFGG 109
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 63.3 bits (147), Expect = 5e-09
Identities = 36/109 (33%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F+ + LS L + F +P+PIQ + G D++ A++GTGKT+ F + ++
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQL 63
Query: 490 LNL---NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLS 627
L+ G++ +ILTPTRE+A QI + + QI + G+ +GGL+
Sbjct: 64 LSTEPRQPGVRALILTPTRELALQINEALLQI-ARGTGIRAAVAVGGLN 111
>UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Marinomonas|Rep: DEAD/DEAH box helicase domain
protein - Marinomonas sp. MWYL1
Length = 417
Score = 63.3 bits (147), Expect = 5e-09
Identities = 36/103 (34%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
Frame = +1
Query: 331 EFTLXGLISS-GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL----- 492
+FT+ IS GF+ P+ IQ +P+ G DLL A +GTGKT+ F A++ +
Sbjct: 25 DFTIEQAISDLGFEAPTEIQEQAIPIALDGSDLLATAPTGTGKTIAFCAPAVQHILDRDE 84
Query: 493 NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
+V+IL P+RE+A QI +V++Q+ H + + ++GG
Sbjct: 85 QSTTAPKVLILAPSRELARQIFNVVEQLTKHTR-IQSHLIIGG 126
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 63.3 bits (147), Expect = 5e-09
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Frame = +1
Query: 274 RTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 453
R+RD V FT++ L+E L + ++ P+PIQ +P+ G DL+ A++GTG
Sbjct: 48 RSRDESAVLT-DFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTG 106
Query: 454 KTVVFSIIALEKLNLN------NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVM 615
KT F + L ++ N + ++L PTRE+A QI D + G + +V V+
Sbjct: 107 KTAAFVLPILHRIAANRARPAPRACRALVLAPTRELATQIADAARTYGKFTRP-SVAVVI 165
Query: 616 GG 621
GG
Sbjct: 166 GG 167
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 63.3 bits (147), Expect = 5e-09
Identities = 36/116 (31%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Frame = +1
Query: 298 ENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSII 477
E++TF + L+ L L S G++ P+PIQ + G D+L A++GTGKT FS+
Sbjct: 3 ESLTFADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLP 62
Query: 478 ALEKLN-LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 642
L +++ N Q ++L PTRE+A Q+ + + +V + GG + +
Sbjct: 63 LLSRIDTTKNKPQALVLCPTRELAIQVAEAFQTYARGVDNFHVLPIYGGADMRNQL 118
>UniRef50_A5BNE7 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 339
Score = 63.3 bits (147), Expect = 5e-09
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Frame = +1
Query: 340 LXGLISSGFQKPSPIQLHG-VPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLN-NGLQ 513
L ++ G +KPS IQ G VP K G D++ +A+SGTGKT F L++LN Q
Sbjct: 24 LLNVLCEGIEKPSAIQQKGIVPFCK-GLDVIQQAQSGTGKTATFCSGILQQLNEELTQCQ 82
Query: 514 VMILTPTREIAAQICDVIKQIGSH 585
++L PTRE+A QI V++ +G H
Sbjct: 83 ALVLAPTRELAQQIEKVMRALGDH 106
>UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-PA
- Drosophila melanogaster (Fruit fly)
Length = 826
Score = 63.3 bits (147), Expect = 5e-09
Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 5/122 (4%)
Frame = +1
Query: 271 TRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGT 450
T+ ++ F LS+ T L S F P+ +Q + G D+L A +G+
Sbjct: 61 TKYAEIDATAIKKFAQFPLSKKTQKALAESKFVHPTQVQRDSIGPALQGKDVLGAAITGS 120
Query: 451 GKTVVFSIIALEKLNLN-----NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVM 615
GKT+ F I LE L +N +G+ +I++PTRE+A QI + +K++G HH + ++
Sbjct: 121 GKTLAFLIPVLEHLFMNKWSRTDGVGAIIISPTRELAYQIFETLKKVGKHH-DFSAGLII 179
Query: 616 GG 621
GG
Sbjct: 180 GG 181
>UniRef50_Q9PA24 Cluster: ATP-dependent RNA helicase rhlB; n=87;
Proteobacteria|Rep: ATP-dependent RNA helicase rhlB -
Xylella fastidiosa
Length = 543
Score = 63.3 bits (147), Expect = 5e-09
Identities = 39/120 (32%), Positives = 65/120 (54%), Gaps = 8/120 (6%)
Frame = +1
Query: 301 NVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 480
N+ F+S+ L L GL +GF +PIQ +P+ G D+ +A++GTGKT+ F ++
Sbjct: 8 NLNFSSLDLHPALLTGLTRAGFTLCTPIQALTLPVALAGRDIAGQAQTGTGKTLAFLVVV 67
Query: 481 LEKLNLNNGL--------QVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNE 636
+ +L GL + +IL PTRE+A QI + + G + GL + GG+ ++
Sbjct: 68 VNRLLSRPGLVNRNPEDPRALILAPTRELAIQIYNDAVKFGG-NLGLRFALIYGGVDYDK 126
>UniRef50_Q9VHU1 Cluster: Probable ATP-dependent RNA helicase DDX55
homolog; n=7; Endopterygota|Rep: Probable ATP-dependent
RNA helicase DDX55 homolog - Drosophila melanogaster
(Fruit fly)
Length = 613
Score = 63.3 bits (147), Expect = 5e-09
Identities = 40/117 (34%), Positives = 65/117 (55%), Gaps = 10/117 (8%)
Frame = +1
Query: 325 LSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN 504
LS+ L + S GFQ+ +P+Q +PL D+ EA +G+GKT+ F + LE L +
Sbjct: 14 LSDAVLQVVQSFGFQQMTPVQTAAIPLLLARKDVSAEAVTGSGKTLAFLVPMLEILQRRH 73
Query: 505 --------GLQVMILTPTREIAAQICDVIKQIGSHH--KGLNVEXVMGGLSVNEXIA 645
+ ++++PTRE+A QI +V+ Q H + LN + ++GG S+ E IA
Sbjct: 74 KETPWGPKEIGALVISPTRELARQISEVLAQFLEHEDLEHLNQQLIVGGNSIEEDIA 130
>UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP10 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 878
Score = 63.3 bits (147), Expect = 5e-09
Identities = 39/112 (34%), Positives = 64/112 (57%), Gaps = 3/112 (2%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F +M L+ L + GF+ P+PIQ VPL G D++ A++G+GKT F I +E+
Sbjct: 80 FQAMGLNVALLKAIAQKGFKIPTPIQRKAVPLILQGDDVVGMARTGSGKTAAFVIPMIER 139
Query: 490 LNLNN---GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNE 636
L ++ G + +I++P+RE+A Q V+K+ G L ++GG S+ E
Sbjct: 140 LKTHSAKVGARGVIMSPSRELALQTLKVVKEFG-RGTDLRTILLVGGDSLEE 190
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 62.9 bits (146), Expect = 6e-09
Identities = 38/124 (30%), Positives = 65/124 (52%), Gaps = 9/124 (7%)
Frame = +1
Query: 301 NVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 480
+VTF + LS L + G+ P+PIQ +P G D++ A++GTGKT F++
Sbjct: 4 DVTFAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPL 63
Query: 481 LEKLN---------LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVN 633
L +L + ++ +I+ PTRE+A QI + +++ G + L V GG+++
Sbjct: 64 LYRLQAYANTSVSPARHPVRALIMAPTRELAMQIDESVRKYGK-YLALRTAVVFGGINIE 122
Query: 634 EXIA 645
IA
Sbjct: 123 PQIA 126
>UniRef50_Q11U28 Cluster: ATP-dependent RNA helicase protein; n=4;
Bacteria|Rep: ATP-dependent RNA helicase protein -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 413
Score = 62.9 bits (146), Expect = 6e-09
Identities = 39/117 (33%), Positives = 61/117 (52%), Gaps = 5/117 (4%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE- 486
F S L+ L +GF +P+ IQ +P G D+L A++GTGKT F I L
Sbjct: 3 FESYDLAPGIKKSLAEAGFNRPTDIQFKSIPPILAGEDVLAIAQTGTGKTAAFVIPVLNT 62
Query: 487 ----KLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXIA 645
K + + + +++ PTRE+A QI +V K+IG++ + L + GG+ IA
Sbjct: 63 LINVKKSEHTDISCLVMAPTRELAVQISEVFKKIGAYTR-LRTVCITGGVEQEAQIA 118
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 62.9 bits (146), Expect = 6e-09
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 3/112 (2%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLG-KCGFDLLLEAKSGTGKTVVFSIIALE 486
F LSE L + G++KP+ IQ +P DL+ +A++GTGKT F I LE
Sbjct: 20 FEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQTGTGKTAAFGIPLLE 79
Query: 487 KLNL--NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNE 636
+++ N ++ +I+TPTRE+A QI + +K + K + + + GG S+ +
Sbjct: 80 RIDFKANKFVKAIIVTPTRELALQIFEELKSL-KGTKRVKITTLYGGQSLEK 130
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 62.9 bits (146), Expect = 6e-09
Identities = 38/114 (33%), Positives = 60/114 (52%), Gaps = 1/114 (0%)
Frame = +1
Query: 283 DVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTV 462
D + + VTF S+ L E L + GF+ P+PIQ +P D++ A++GTGKT
Sbjct: 38 DEEDTDTVTFASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVVGIAQTGTGKTA 97
Query: 463 VFSIIALEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
F + L ++ + +Q ++L PTRE+A Q I+ + L+V V GG
Sbjct: 98 AFGLPLLAIVDADERNVQALVLAPTRELAMQSAQAIEDFAARTARLDVVPVYGG 151
>UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 400
Score = 62.9 bits (146), Expect = 6e-09
Identities = 33/119 (27%), Positives = 64/119 (53%), Gaps = 1/119 (0%)
Frame = +1
Query: 289 QIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF 468
Q+ E V + + LS + + G+ + +P+Q +P D++ +A +GTGKT F
Sbjct: 7 QVNEVVNYADLGLSAEVMKAIDKKGYVRATPVQAGAIPYFMEWKDVIAKAPTGTGKTFAF 66
Query: 469 SIIALEKLN-LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 642
I +E ++ ++ +Q ++L PTRE+A QI D ++ + +G+ + GG + + I
Sbjct: 67 GIPMVEHIDPESDAVQALVLAPTRELALQIQDELRDLCEFKEGVRSVCLYGGAPIEKQI 125
>UniRef50_A7U5X3 Cluster: DEAD-box helicase 18; n=7; Plasmodium|Rep:
DEAD-box helicase 18 - Plasmodium falciparum
Length = 946
Score = 62.9 bits (146), Expect = 6e-09
Identities = 39/126 (30%), Positives = 68/126 (53%), Gaps = 6/126 (4%)
Frame = +1
Query: 262 RNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAK 441
+N+ D ++ + F ++ +S+ TL L + F + IQ +P+ + +A+
Sbjct: 109 KNNLTIIDKNVLTSAEFKTLPISKRTLRALNENNFIYMTNIQYVSLPIVLLNKHIYAQAQ 168
Query: 442 SGTGKTVVFSIIALEKL------NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNV 603
+GTGKT+ F I +EK+ N N L +I+TPTRE+ QI +V+ + +HK LN+
Sbjct: 169 TGTGKTLCFCIPLIEKMYRNSIDNYNKILGGIIITPTRELVFQIFEVLNMLNKYHK-LNI 227
Query: 604 EXVMGG 621
+GG
Sbjct: 228 CCAIGG 233
>UniRef50_A2DGJ7 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 156
Score = 62.9 bits (146), Expect = 6e-09
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 9/130 (6%)
Frame = +1
Query: 289 QIVENV----TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGK 456
++VEN TFTS+ + E L F+K PIQ +PL G D++ AK+G+GK
Sbjct: 7 EVVENENHDDTFTSLKVCEGAKGVLTKLPFEKMFPIQKKAIPLLLEGADVVGAAKTGSGK 66
Query: 457 TVVFSIIAL-----EKLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
T+ F I A+ + ++ + G+ V+IL PT E+A+QI DV+ + ++V GG
Sbjct: 67 TLAFVIPAINLLISKNISKSEGIAVLILVPTHELASQIFDVVSSL-ILDLDISVGLFCGG 125
Query: 622 LSVNEXIAKF 651
++ I ++
Sbjct: 126 SNIKTDIEQY 135
>UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;
Pezizomycotina|Rep: ATP-dependent RNA helicase dbp10 -
Emericella nidulans (Aspergillus nidulans)
Length = 936
Score = 62.9 bits (146), Expect = 6e-09
Identities = 42/130 (32%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Frame = +1
Query: 262 RNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAK 441
R S + + + F +M L+ L + GF P+PIQ +P+ D++ A+
Sbjct: 77 RKSANLKGRTVKKGGGFQAMGLNANLLKAIARKGFSVPTPIQRKTIPVIMEDQDVVGMAR 136
Query: 442 SGTGKTVVFSIIALEKLNLNN---GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXV 612
+G+GKT F I +EKL ++ G + +IL+P+RE+A Q V+K++G KG +++ V
Sbjct: 137 TGSGKTAAFVIPMIEKLKSHSTKFGARGLILSPSRELALQTLKVVKELG---KGTDLKSV 193
Query: 613 M--GGLSVNE 636
+ GG S+ E
Sbjct: 194 LLVGGDSLEE 203
>UniRef50_Q8D6Y8 Cluster: Superfamily II DNA and RNA helicase; n=32;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 427
Score = 62.5 bits (145), Expect = 8e-09
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 7/113 (6%)
Frame = +1
Query: 304 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 483
++F S + + L G++K +PIQ +P+ + G D+ A++GTGKT FS+ +
Sbjct: 1 MSFASQGFAPEVVKALEECGYEKLTPIQQKAIPVARRGHDIFATAQTGTGKTAAFSLPLI 60
Query: 484 EKLNLNNG-------LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
++L L +G + +I PTRE+A QI D IK + + L+V + GG
Sbjct: 61 QQL-LESGKSASRKTARALIFAPTRELAEQIADNIKAY-TKYTNLSVAAIFGG 111
>UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=1; Exiguobacterium sibiricum
255-15|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Exiguobacterium sibiricum 255-15
Length = 391
Score = 62.5 bits (145), Expect = 8e-09
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Frame = +1
Query: 364 FQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMILTPTRE 540
F+K P+Q +PL + D+L+EA +GTGKT+ + I ALE ++ N +QV+I PTRE
Sbjct: 17 FEKMMPVQEQAIPLLRERKDVLVEAPTGTGKTLAYVIPALELIDENEPHIQVVITAPTRE 76
Query: 541 IAAQICDVIKQIGSHHKGLNVEXVMGGLSV 630
+ QI VI Q+ S G+ +GG+ +
Sbjct: 77 LVMQIHQVI-QLFSQGSGIKSGAFIGGVEL 105
>UniRef50_Q2BGG8 Cluster: RNA helicase DbpA; n=1; Neptuniibacter
caesariensis|Rep: RNA helicase DbpA - Neptuniibacter
caesariensis
Length = 191
Score = 62.5 bits (145), Expect = 8e-09
Identities = 35/121 (28%), Positives = 61/121 (50%), Gaps = 1/121 (0%)
Frame = +1
Query: 283 DVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTV 462
D V + +F + L + L L G+++ + IQ +P DL+ +AK+G+GKT
Sbjct: 29 DEPYVSDSSFAKLALPKSVLSNLDQLGYKEMTAIQQQALPEVLAEKDLIAKAKTGSGKTA 88
Query: 463 VFSIIALEKLNLNN-GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEX 639
F I L KL N Q ++L PTRE+A + + ++++ + L + + GG +
Sbjct: 89 AFGIGLLLKLRPRNFATQALVLCPTRELATHVANELRKLARFTENLKILTLCGGQPIGPQ 148
Query: 640 I 642
I
Sbjct: 149 I 149
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 62.5 bits (145), Expect = 8e-09
Identities = 39/124 (31%), Positives = 71/124 (57%), Gaps = 11/124 (8%)
Frame = +1
Query: 304 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 483
++F S+ LSE + + ++G+ +P+P+Q +P G DL++ A++GTGKT F++ L
Sbjct: 1 MSFASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPIL 60
Query: 484 EKL--------NLNNG---LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSV 630
E+L + +G +V++LTPTRE+AAQ+ D K + + + GG+ +
Sbjct: 61 ERLFPGGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFK-VYARDLNFISACIFGGVGM 119
Query: 631 NEXI 642
N +
Sbjct: 120 NPQV 123
>UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3;
Sphingobacteriales|Rep: DEAD box-related helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 437
Score = 62.5 bits (145), Expect = 8e-09
Identities = 38/108 (35%), Positives = 57/108 (52%), Gaps = 2/108 (1%)
Frame = +1
Query: 304 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 483
+TF + L L S GF KP+PIQ +P+ DL+ A++GTGKT + + L
Sbjct: 1 MTFNDFNFNSGLLDSLSSMGFNKPTPIQTEAIPVIMSNSDLVACAQTGTGKTAAYMLPIL 60
Query: 484 EKLNLNN--GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
K+ +N L ++L PTRE+A QI I+ S+ ++ V GG
Sbjct: 61 HKIIESNTDSLDTLVLVPTRELAIQIDQQIEGF-SYFINVSSIAVYGG 107
>UniRef50_A7CUH7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Opitutaceae bacterium TAV2|Rep: DEAD/DEAH box
helicase domain protein - Opitutaceae bacterium TAV2
Length = 536
Score = 62.5 bits (145), Expect = 8e-09
Identities = 34/110 (30%), Positives = 60/110 (54%), Gaps = 1/110 (0%)
Frame = +1
Query: 298 ENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSII 477
++ F+ + L++ + G+ +P+PIQ VP G D+ A++GTGKT F++
Sbjct: 131 QDTAFSKLGLNDALAFAVTEMGYTEPTPIQAQAVPAVLAGRDVTGSAQTGTGKTAAFALP 190
Query: 478 ALEKLNLN-NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGL 624
L KL + L+ ++L PTRE+A Q+ + ++ S + L V GG+
Sbjct: 191 ILHKLGAHERRLRCLVLEPTRELALQVEEAFQKY-SKYTDLTATVVYGGV 239
>UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinomonas sp. MWYL1|Rep: DEAD/DEAH box helicase
domain protein - Marinomonas sp. MWYL1
Length = 452
Score = 62.5 bits (145), Expect = 8e-09
Identities = 40/122 (32%), Positives = 65/122 (53%), Gaps = 9/122 (7%)
Frame = +1
Query: 289 QIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVF 468
++ + F + L + + + GF+ S IQ +P+ G+D++ +A++GTGKT F
Sbjct: 66 EVEGKMRFHDLNLPDRVIKSIAEMGFEYCSEIQAETLPMTLLGYDIIGQAQTGTGKTAAF 125
Query: 469 SI--------IALEKLNLNNGLQVMILTPTREIAAQICD-VIKQIGSHHKGLNVEXVMGG 621
I LE+ NN + +I+ PTRE+A QI D +K + H LNV ++GG
Sbjct: 126 LIAMISDFLDYPLEEKRANNFARGLIIAPTRELAIQIADEAVKLTSNCH--LNVVTLVGG 183
Query: 622 LS 627
LS
Sbjct: 184 LS 185
>UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n=4;
Eukaryota|Rep: ATP-dependent RNA helicase, putative -
Theileria parva
Length = 470
Score = 62.5 bits (145), Expect = 8e-09
Identities = 34/91 (37%), Positives = 58/91 (63%), Gaps = 1/91 (1%)
Frame = +1
Query: 361 GFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK-LNLNNGLQVMILTPTR 537
G+++P+ IQ+ +P+ G D++ A++G+GKT F+I L+K L L +IL PTR
Sbjct: 60 GWKRPTKIQIEAIPIALSGKDIIGLAETGSGKTAAFTIPILQKLLEKPQRLFSLILAPTR 119
Query: 538 EIAAQICDVIKQIGSHHKGLNVEXVMGGLSV 630
E++ QI + + +GS GL+V ++GGL +
Sbjct: 120 ELSLQIKEQLISLGS-EIGLDVCLILGGLDM 149
>UniRef50_Q9H0S4 Cluster: Probable ATP-dependent RNA helicase DDX47;
n=32; Eukaryota|Rep: Probable ATP-dependent RNA helicase
DDX47 - Homo sapiens (Human)
Length = 455
Score = 62.5 bits (145), Expect = 8e-09
Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
Frame = +1
Query: 253 HDIRNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLL 432
HD V+ E TF + +++ G+ KP+ IQ+ +PL G D++
Sbjct: 7 HDSPTEASQPIVEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIG 66
Query: 433 EAKSGTGKTVVFSIIALEK-LNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEX 609
A++G+GKT F++ L L L ++LTPTRE+A QI + + +GS G+
Sbjct: 67 LAETGSGKTGAFALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGS-SIGVQSAV 125
Query: 610 VMGGL-SVNEXIA 645
++GG+ S+++ +A
Sbjct: 126 IVGGIDSMSQSLA 138
>UniRef50_Q5GRS8 Cluster: Superfamily II DNA/RNA helicase; n=4;
Wolbachia|Rep: Superfamily II DNA/RNA helicase -
Wolbachia sp. subsp. Brugia malayi (strain TRS)
Length = 408
Score = 62.1 bits (144), Expect = 1e-08
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Frame = +1
Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 486
+F M L L + F P+P+Q +PL G D+L A++GTGKT+ F+I +
Sbjct: 3 SFYEMGLPLLLAQALDKNSFSVPTPVQAQAIPLALKGKDILGSAQTGTGKTLAFAIPLIA 62
Query: 487 K-LNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
K L N +++ PTRE+A Q+ + I ++ + L + ++GG
Sbjct: 63 KLLGEPNASTALVIVPTRELAQQVTNEIGKLLLKNSVLKIALLIGG 108
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 62.1 bits (144), Expect = 1e-08
Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 5/120 (4%)
Frame = +1
Query: 304 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 483
+TF + L T+ + SG+ P+PIQ +P G D++ A++GTGKT F + +
Sbjct: 24 LTFEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKDIMASAQTGTGKTAAFILPII 83
Query: 484 EKLNLNN-----GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXIAK 648
E L + + ++LTPTRE+AAQ+ + + + + L + V GG+S+ + +
Sbjct: 84 ELLRAEDKPKRYQVHSLVLTPTRELAAQV-EASAKAYTKYLALRSDAVFGGVSIRPQVKR 142
>UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL
protein - Bacillus subtilis
Length = 376
Score = 62.1 bits (144), Expect = 1e-08
Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 1/99 (1%)
Frame = +1
Query: 355 SSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLN-LNNGLQVMILTP 531
+SGFQKP+P+Q L G D++ E+ +GTGKT+ +++ LE++ Q +IL P
Sbjct: 21 ASGFQKPTPVQEQAAQLIMDGKDVIAESPTGTGKTLAYALPVLERIKPEQKHPQAVILAP 80
Query: 532 TREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXIAK 648
+RE+ QI VI+ + + L ++GG +V + + K
Sbjct: 81 SRELVMQIFQVIQDWKAGSE-LRAASLIGGANVKKQVEK 118
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 62.1 bits (144), Expect = 1e-08
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 9/122 (7%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F + LS + GL + P+PIQ +P G G D+L A++GTGKT F + L+
Sbjct: 73 FDMLGLSPRLVAGLAAQNITDPTPIQTRAIPHGLNGRDVLGIAQTGTGKTAAFGLPLLDA 132
Query: 490 LNLNNGLQV-------MILTPTREIAAQICDVIKQI--GSHHKGLNVEXVMGGLSVNEXI 642
L + G + +IL PTRE+ +QIC+ ++ GSH L ++ ++GG+++ I
Sbjct: 133 L-MKAGTKPAPRTCRGLILAPTRELVSQICESLRAFTEGSH---LKLQVIVGGVAIGPQI 188
Query: 643 AK 648
+
Sbjct: 189 KR 190
>UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 763
Score = 62.1 bits (144), Expect = 1e-08
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Frame = +1
Query: 301 NVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 480
NV+F M LS L +G+ P+PIQ +P+ G D+ A +GTGKT F +
Sbjct: 147 NVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAFVLPI 206
Query: 481 LEKLNLN----NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSV 630
LE++ + +V++L PTRE+A Q+ V +++ + + L V GGL +
Sbjct: 207 LERMIYRPKGASCTRVLVLVPTRELAIQVFQVFRKLSTFIQ-LEVCLCAGGLDL 259
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 62.1 bits (144), Expect = 1e-08
Identities = 41/128 (32%), Positives = 67/128 (52%), Gaps = 3/128 (2%)
Frame = +1
Query: 262 RNSTRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAK 441
R++ T D V F+S+ L + L GL GFQ+ +P+Q +P D++ AK
Sbjct: 7 RDTRITTDDVKGSGVLFSSLGLKQELLMGLTQEGFQQLTPVQELAIPHILARRDVVARAK 66
Query: 442 SGTGKTVVFSIIALEKLN-LNNGLQVMILTPTREIAAQICDVIKQIGSHHKGL--NVEXV 612
+GTGKT F I L+ +N + +Q ++L TRE+A Q V K + + + +
Sbjct: 67 NGTGKTGSFLIPILQMVNPAKDHIQALVLLHTRELAMQTAKVAKTLSKNMPDVTGRIMCA 126
Query: 613 MGGLSVNE 636
+GG+S+ E
Sbjct: 127 IGGVSIAE 134
>UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD15481p
- Drosophila melanogaster (Fruit fly)
Length = 782
Score = 62.1 bits (144), Expect = 1e-08
Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 6/121 (4%)
Frame = +1
Query: 286 VQIVENVT-FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTV 462
V+ E +T F M LS + + G+ P+PIQ +P+ G D+ A +GTGKT
Sbjct: 150 VEANEQITSFYQMNLSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGKTA 209
Query: 463 VFSIIALEKL---NLNNG--LQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLS 627
+ + LE+L LNN +V++L PTRE+ AQ+ V KQ+ ++V +GGL
Sbjct: 210 AYMLPTLERLLYRPLNNKAITRVLVLVPTRELGAQVYQVTKQL-CQFTTIDVGLAIGGLD 268
Query: 628 V 630
V
Sbjct: 269 V 269
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 62.1 bits (144), Expect = 1e-08
Identities = 34/70 (48%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
Frame = +1
Query: 349 LISSGFQKPSPIQLHGV-PLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMI 522
++S GF+KPSPIQ G+ P+ K G D + +A+SGTGKT FSI L+ ++ ++ Q +I
Sbjct: 49 VLSYGFEKPSPIQQCGIIPIIK-GKDTIAQAQSGTGKTATFSIATLQVIDTSSPHTQALI 107
Query: 523 LTPTREIAAQ 552
L PTRE+A Q
Sbjct: 108 LAPTRELAQQ 117
>UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1;
Chaetomium globosum|Rep: ATP-dependent RNA helicase
DBP10 - Chaetomium globosum (Soil fungus)
Length = 762
Score = 62.1 bits (144), Expect = 1e-08
Identities = 39/114 (34%), Positives = 67/114 (58%), Gaps = 5/114 (4%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F +M L+ L + GF P+PIQ +PL D++ A++G+GKT F I +E+
Sbjct: 88 FQAMGLNSNLLRAISRKGFSVPTPIQRKTIPLVLERRDVVGMARTGSGKTAAFVIPMIER 147
Query: 490 LNLNN---GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVM--GGLSVNE 636
L ++ G + +I++P+RE+A Q V+K++G KG +++ V+ GG S+ E
Sbjct: 148 LKAHSARVGARAIIMSPSRELALQTLKVVKELG---KGTDLKTVLLVGGDSLEE 198
>UniRef50_Q6A6U7 Cluster: ATP-dependent RNA helicase; n=3;
Actinomycetales|Rep: ATP-dependent RNA helicase -
Propionibacterium acnes
Length = 700
Score = 61.7 bits (143), Expect = 1e-08
Identities = 35/110 (31%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F+++ + + + L +G P IQ+ +P G D+L A +G+GKT+ F + L +
Sbjct: 231 FSALGVPDEIVAALAKTGITDPFRIQIAAIPDAIAGRDVLGRASTGSGKTLAFGVPLLSR 290
Query: 490 LNL----NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLS 627
L+ +N + +IL+PTRE+A QI D + + S GL+ + GG+S
Sbjct: 291 LSATPREDNRPRALILSPTRELAMQIADALSSLAS-SMGLSTILIAGGMS 339
>UniRef50_Q03532 Cluster: ATP-dependent RNA helicase HAS1; n=70;
Eukaryota|Rep: ATP-dependent RNA helicase HAS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 505
Score = 61.7 bits (143), Expect = 1e-08
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 5/118 (4%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE- 486
F + LS+ TL + GF + +Q +P G D+L AK+G+GKT+ F I A+E
Sbjct: 44 FEELKLSQPTLKAIEKMGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEL 103
Query: 487 ----KLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXIAK 648
K NG ++++TPTRE+A QI V +++ H V+GG + + K
Sbjct: 104 LHSLKFKPRNGTGIIVITPTRELALQIFGVARELMEFH-SQTFGIVIGGANRRQEAEK 160
>UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=7;
Eukaryota|Rep: ATP-dependent RNA helicase abstrakt -
Drosophila melanogaster (Fruit fly)
Length = 619
Score = 61.7 bits (143), Expect = 1e-08
Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 14/126 (11%)
Frame = +1
Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI---- 474
+F M + L GL + G + P+PIQ+ G+P G DL+ A +G+GKT+VF +
Sbjct: 178 SFREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVIM 237
Query: 475 IALEK-----LNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXV-----MGGL 624
ALE+ N G +I+ P+RE+A Q ++I+ H + + + MGGL
Sbjct: 238 FALEQEYSLPFERNEGPYGLIICPSRELAKQTHEIIQHYSKHLQACGMPEIRSCLAMGGL 297
Query: 625 SVNEXI 642
V+E +
Sbjct: 298 PVSEAL 303
>UniRef50_Q9RKJ0 Cluster: ATP-dependent RNA helicase; n=2;
Streptomyces|Rep: ATP-dependent RNA helicase -
Streptomyces coelicolor
Length = 740
Score = 61.3 bits (142), Expect = 2e-08
Identities = 39/116 (33%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Frame = +1
Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 486
TF + L E + L +G P PIQ +P G D+L ++G+GKT+ F + L
Sbjct: 62 TFADLGLPEGVVRKLAQNGVTTPFPIQAATIPDALAGKDILGRGRTGSGKTLSFGLPTLA 121
Query: 487 KL----NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 642
L + + +ILTPTRE+A Q+ D ++ G GL ++ V GG S+ I
Sbjct: 122 TLAGGRTEKHKPRAVILTPTRELAMQVADALQPYGD-VLGLKMKVVCGGTSMGNQI 176
>UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein;
n=12; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Roseiflexus sp. RS-1
Length = 467
Score = 61.3 bits (142), Expect = 2e-08
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 2/117 (1%)
Frame = +1
Query: 304 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 483
++F S G+ G+ P+PIQ +P G D++ A++GTGKT F + L
Sbjct: 1 MSFDSFRFHPQITAGIRDLGYHTPTPIQEQVIPHALDGRDVIGIAQTGTGKTAAFVLPIL 60
Query: 484 EKL--NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXIAK 648
++L ++ MI+TPTRE+A QI VI+ +G + GL + GG+ I +
Sbjct: 61 QRLMRGPRGRVRAMIVTPTRELAEQIQGVIEALGK-YTGLRSVTLYGGVGYQGQIQR 116
>UniRef50_Q384E1 Cluster: Mitochondrial DEAD box protein; n=5;
Trypanosoma|Rep: Mitochondrial DEAD box protein -
Trypanosoma brucei
Length = 546
Score = 61.3 bits (142), Expect = 2e-08
Identities = 33/88 (37%), Positives = 53/88 (60%), Gaps = 2/88 (2%)
Frame = +1
Query: 325 LSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKL--NL 498
L ++ GL SSGF +PIQ + +P+ G D++ A +G+GKTV F++ AL+K +
Sbjct: 125 LPDWLSKGLQSSGFSCTTPIQSYTIPVLDEGHDMIGLAPTGSGKTVAFAVPALKKFQWSP 184
Query: 499 NNGLQVMILTPTREIAAQICDVIKQIGS 582
N ++++L PTRE+ Q V Q+ S
Sbjct: 185 NGSPRIVVLAPTRELVQQTAKVFHQLSS 212
>UniRef50_A4V6K5 Cluster: DEAD box polypeptide 19 protein; n=3;
Platyhelminthes|Rep: DEAD box polypeptide 19 protein -
Dugesia japonica (Planarian)
Length = 434
Score = 61.3 bits (142), Expect = 2e-08
Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 3/110 (2%)
Frame = +1
Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVP--LGKCGFDLLLEAKSGTGKTVVFSIIA 480
+F + L L G+ S GF+KPS IQ +P L +L+ +++SGTGKT F +
Sbjct: 49 SFEDLQLKSELLNGISSMGFRKPSSIQERALPMLLENQPKNLIAQSQSGTGKTATFLLTM 108
Query: 481 LEKLNLNNGL-QVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLS 627
L K+++N+ Q + + PTRE+ QI +V + + + + GLS
Sbjct: 109 LSKIDVNDPFCQCLCMAPTRELVNQIAEVAIIMSKFMNNVKITCAIKGLS 158
>UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n=6;
Trypanosomatidae|Rep: ATP-dependent RNA helicase,
putative - Leishmania infantum
Length = 924
Score = 61.3 bits (142), Expect = 2e-08
Identities = 38/124 (30%), Positives = 70/124 (56%), Gaps = 10/124 (8%)
Frame = +1
Query: 280 RDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKT 459
RDV+ VE+ F +L+ + G++KP+P+Q +G+P+ G DL+ A++G+GKT
Sbjct: 466 RDVKPVED--FADLLVEPALAANIERCGYKKPTPVQRYGIPVALSGSDLMACAQTGSGKT 523
Query: 460 VVFSIIALEKLNLNNGLQ----------VMILTPTREIAAQICDVIKQIGSHHKGLNVEX 609
F +I + + L +G+ ++L PTRE+A QI D ++++ + + + +
Sbjct: 524 AAF-LIPVVQYMLVHGVSPARQRKSYPIALVLAPTRELAVQIFDEVRKL-TFNTDIFYDV 581
Query: 610 VMGG 621
V GG
Sbjct: 582 VYGG 585
>UniRef50_A2FYU9 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 633
Score = 61.3 bits (142), Expect = 2e-08
Identities = 35/94 (37%), Positives = 57/94 (60%), Gaps = 5/94 (5%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE- 486
F+S+ + E T L S F K SPIQ + CG D++ A++G+GKT+ F I +E
Sbjct: 51 FSSLPILESTKKSLEKSKFTKMSPIQKQTLLYTLCGRDIIGAAETGSGKTLAFCIPIVES 110
Query: 487 ----KLNLNNGLQVMILTPTREIAAQICDVIKQI 576
K + +G+ +I++PTR++AAQ DV+K++
Sbjct: 111 LKKAKFSKMSGIGAIIISPTRDLAAQTFDVLKKL 144
>UniRef50_A4UCU0 Cluster: DEAD box polypeptide 47 isoform 1 variant;
n=9; Coelomata|Rep: DEAD box polypeptide 47 isoform 1
variant - Homo sapiens (Human)
Length = 182
Score = 61.3 bits (142), Expect = 2e-08
Identities = 38/122 (31%), Positives = 68/122 (55%), Gaps = 2/122 (1%)
Frame = +1
Query: 286 VQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVV 465
V+ E TF + +++ G+ KP+ IQ+ +PL G D++ A++G+GKT
Sbjct: 7 VEEEETKTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGA 66
Query: 466 FSIIALEK-LNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGL-SVNEX 639
F++ L L L ++LTPTRE+A QI + + +GS G+ ++GG+ S+++
Sbjct: 67 FALPILNALLETPQRLFALVLTPTRELAFQISEQFEALGS-SIGVQSAVIVGGIDSMSQS 125
Query: 640 IA 645
+A
Sbjct: 126 LA 127
>UniRef50_O74764 Cluster: ATP-dependent rRNA helicase spb4; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent rRNA
helicase spb4 - Schizosaccharomyces pombe (Fission
yeast)
Length = 606
Score = 61.3 bits (142), Expect = 2e-08
Identities = 30/95 (31%), Positives = 59/95 (62%), Gaps = 4/95 (4%)
Frame = +1
Query: 304 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 483
++F S+ + ++ + + GF+K +P+Q + +PL DL++EA +G+GKT+ + +
Sbjct: 1 MSFQSINIDKWLKNAVAAQGFKKMTPVQANAIPLFLKNKDLVVEAVTGSGKTLAYLLPCF 60
Query: 484 EKLNLNN----GLQVMILTPTREIAAQICDVIKQI 576
+K+ + GL +I+ PTRE+A QI +V K++
Sbjct: 61 DKVTRRDTDETGLGALIVAPTRELATQIFNVTKEL 95
>UniRef50_A5DPU0 Cluster: ATP-dependent RNA helicase MAK5; n=1;
Pichia guilliermondii|Rep: ATP-dependent RNA helicase
MAK5 - Pichia guilliermondii (Yeast) (Candida
guilliermondii)
Length = 754
Score = 61.3 bits (142), Expect = 2e-08
Identities = 39/114 (34%), Positives = 60/114 (52%), Gaps = 10/114 (8%)
Frame = +1
Query: 325 LSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE------ 486
LS +T+ GL GF++P+ IQ +PL G D++ +A +G+GKT+ + I LE
Sbjct: 191 LSTYTINGLAGCGFKEPTAIQRKAIPLALQGKDVIGKATTGSGKTLAYGIPILERCLAQL 250
Query: 487 --KLNLNNGLQVMILTPTREIAAQICDVIKQIG--SHHKGLNVEXVMGGLSVNE 636
K N MI PTRE+A Q+ D + +I S + + GGLS+ +
Sbjct: 251 ESKTNTIKPPTAMIFAPTRELAHQVVDHMNKIAKFSPLAQNGIVSITGGLSIQK 304
>UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase drs1 - Schizosaccharomyces pombe (Fission
yeast)
Length = 754
Score = 61.3 bits (142), Expect = 2e-08
Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 4/123 (3%)
Frame = +1
Query: 274 RTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTG 453
+ + + + +F SM LS L GL + GF+ P+ IQ +PL G D++ A +G+G
Sbjct: 249 KEKSMMTTTHSSFQSMNLSRPILKGLSNLGFEVPTQIQDKTIPLALLGKDIVGAAVTGSG 308
Query: 454 KTVVFSIIALEKLNLN----NGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
KT F + LE+L +V+IL PTRE+A Q V +I S + V +GG
Sbjct: 309 KTAAFIVPILERLLYRPKKVPTTRVLILCPTRELAMQCHSVATKIAS-FTDIMVCLCIGG 367
Query: 622 LSV 630
LS+
Sbjct: 368 LSL 370
>UniRef50_Q5KPU1 Cluster: ATP-dependent RNA helicase DBP8; n=2;
Filobasidiella neoformans|Rep: ATP-dependent RNA
helicase DBP8 - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 619
Score = 61.3 bits (142), Expect = 2e-08
Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 1/111 (0%)
Frame = +1
Query: 301 NVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIA 480
+VTF S+ LS + L S +KP+ IQ V G D + AK+G+GKT+ F++
Sbjct: 151 DVTFESLGLSHPLITALASINIKKPTEIQAACVEPILSGRDCIGGAKTGSGKTMAFALPI 210
Query: 481 LEKLNLNN-GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSV 630
+E++ + G+ ++LTPTRE+A Q+ + IG GL ++GG+ +
Sbjct: 211 VERIARDPFGVWAVVLTPTRELAYQLSEQFLVIGK-PLGLTTATIVGGMDM 260
>UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2;
Sordariomycetes|Rep: ATP-dependent RNA helicase DBP10 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 914
Score = 61.3 bits (142), Expect = 2e-08
Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 5/114 (4%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F +M L+ L + GF P+PIQ +PL D++ A++G+GKT F I +E+
Sbjct: 92 FQAMGLNPSLLQAITRKGFAVPTPIQRKSIPLILDRRDVVGMARTGSGKTAAFVIPMIER 151
Query: 490 LNLNN---GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVM--GGLSVNE 636
L ++ G + +I++P+RE+A Q V+K+ G KG +++ V+ GG S+ +
Sbjct: 152 LRAHSARVGARALIMSPSRELALQTLKVVKEFG---KGTDLKTVLLVGGDSLED 202
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 60.9 bits (141), Expect = 3e-08
Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Frame = +1
Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVP--LGKCGFDLLLEAKSGTGKTVVFSIIA 480
TF + +S + G++ P P+Q +P LG+ D++ A++GTGKT F +
Sbjct: 3 TFEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGENN-DVVALAQTGTGKTAAFGLPL 61
Query: 481 LEKLNLNNGL-QVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 642
L+++++ N + Q +IL PTRE+ QI + + GL V V GG S++ I
Sbjct: 62 LQQIDVKNRVPQSLILCPTRELCLQIAGDLNDYSKYIDGLKVLPVYGGSSIDSQI 116
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 60.9 bits (141), Expect = 3e-08
Identities = 37/118 (31%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Frame = +1
Query: 286 VQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVV 465
++ + +V F + + + + L + P+P+Q +P G DLL A++GTGKT
Sbjct: 1 MRFIMSVNFADLGIEQQLVETLNNMNIVTPTPVQEKSIPHVLEGKDLLAAAQTGTGKTAA 60
Query: 466 FS---IIALEKLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSV 630
F I A+++ N +IL PTRE+A Q+ D + Q + H L + V GG S+
Sbjct: 61 FGLPIIQAVQQKKRNGTPHALILVPTRELAQQVFDNLTQY-AEHTDLRIVCVYGGTSI 117
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 60.9 bits (141), Expect = 3e-08
Identities = 35/115 (30%), Positives = 66/115 (57%), Gaps = 4/115 (3%)
Frame = +1
Query: 304 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 483
++F + LS+ L + G+++P+P+Q +P DL+ A++GTGKT F + +
Sbjct: 1 MSFADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMI 60
Query: 484 EKLNLNNGL----QVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNE 636
+ L + +IL PTRE+AAQ+ + ++ G +HK L++ ++GG+ + E
Sbjct: 61 DILAHGRCRARMPRSLILEPTRELAAQVAENFEKYGKYHK-LSMSLLIGGVPMAE 114
>UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular
organisms|Rep: DEAD/DEAH box helicase - Thiobacillus
denitrificans (strain ATCC 25259)
Length = 533
Score = 60.9 bits (141), Expect = 3e-08
Identities = 30/111 (27%), Positives = 61/111 (54%), Gaps = 5/111 (4%)
Frame = +1
Query: 304 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 483
++F+ + L L ++++G++ +P+Q +P G DLL+ + +G+GKT F + ++
Sbjct: 1 MSFSELGLDPLILKSVLAAGYENATPVQQQAIPAALSGGDLLVSSHTGSGKTAAFLLPSI 60
Query: 484 EKLNL-----NNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
++L + G +V++LTPTRE+A Q+ G + ++GG
Sbjct: 61 QRLLAEPAVKSIGPRVLVLTPTRELALQVEKAAMTYGKEMRRFRTACLVGG 111
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 60.9 bits (141), Expect = 3e-08
Identities = 39/123 (31%), Positives = 69/123 (56%), Gaps = 8/123 (6%)
Frame = +1
Query: 304 VTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIAL 483
++F S+ L + L L +Q P+P+Q +P G D++ A++GTGKT F++ L
Sbjct: 1 MSFASLGLIDPLLRNLQDLNYQAPTPVQAKAIPAVLGGKDVMAGAQTGTGKTAGFALPLL 60
Query: 484 EKL------NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVE--XVMGGLSVNEX 639
++L +N +V++L PTRE+A Q V++ ++ KGL++ GG+S+N
Sbjct: 61 QRLVQHGPAVSSNRARVLVLVPTRELAEQ---VLQSFIAYGKGLDLRFLAAYGGVSINPQ 117
Query: 640 IAK 648
+ K
Sbjct: 118 MMK 120
>UniRef50_A6W6A7 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Kineococcus radiotolerans SRS30216|Rep: DEAD/DEAH
box helicase domain protein - Kineococcus radiotolerans
SRS30216
Length = 590
Score = 60.9 bits (141), Expect = 3e-08
Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 6/131 (4%)
Frame = +1
Query: 271 TRTRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGT 450
T +++ E+ TF + L E + L G P IQ +P G G D+L A++G+
Sbjct: 136 TAAEQIEVAES-TFAELGLPEELVAALERRGMTAPFAIQSRTLPDGIAGRDILGRARTGS 194
Query: 451 GKTVVFSIIALEKL------NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXV 612
GKT+ F + L +L + + ++L PTRE+A Q+ D ++ +G L + V
Sbjct: 195 GKTLGFGLPMLARLAQQKRPRITGAPRGLVLVPTRELAMQVADALRPLGD-SLDLRLSVV 253
Query: 613 MGGLSVNEXIA 645
+GG+ IA
Sbjct: 254 VGGVPYGRQIA 264
>UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3;
Proteobacteria|Rep: ATP-dependent RNA helicase DbpA -
Alteromonas macleodii 'Deep ecotype'
Length = 459
Score = 60.9 bits (141), Expect = 3e-08
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Frame = +1
Query: 349 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEKLNLNN-GLQVMIL 525
L S G + SPIQ +P G D++ +A++G+GKT+ F I ALEK+ +N+ Q ++L
Sbjct: 19 LDSQGIHQLSPIQAQSLPDALQGKDVIGQAQTGSGKTLCFVIPALEKIEVNDFSTQAIML 78
Query: 526 TPTREIAAQICDVIKQIGSHHKGLNVEXVMGG 621
PTRE+A Q+ + + V + GG
Sbjct: 79 CPTRELAEQVAQQCRSAAKDIGNIKVTTLCGG 110
>UniRef50_A5BYF4 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 60.9 bits (141), Expect = 3e-08
Identities = 35/102 (34%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
Frame = +1
Query: 277 TRDVQIVENVTFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGK 456
T V+++ ++F M + L G+ + F+KPS +Q V G D++ +A+SGTGK
Sbjct: 269 TEGVELI--MSFDQMGIKNDLLRGIYAYSFEKPSAVQQRAVLPIIQGHDVIAQAQSGTGK 326
Query: 457 TVVFSIIALEKLNLNN-GLQVMILTPTREIAAQICDVIKQIG 579
T +F++ + ++ +N +Q +I +PTRE+A+Q VI IG
Sbjct: 327 TSMFALTVYQMVDTSNREVQALISSPTRELASQTEKVILAIG 368
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 60.9 bits (141), Expect = 3e-08
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 6/95 (6%)
Frame = +1
Query: 331 EFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI-----IALEK-L 492
+F + + GF P+ IQ G P+ G DL+ A++G+GKT+ + + IA +K L
Sbjct: 238 DFVMNEINKMGFPNPTAIQAQGWPIALSGRDLVGIAQTGSGKTLAYMLPGIVHIAHQKPL 297
Query: 493 NLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGL 597
G V++L PTRE+A QI V++ G+H K L
Sbjct: 298 QRGEGPVVLVLAPTRELAQQIQTVVRDFGTHSKPL 332
>UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8;
Aconoidasida|Rep: DEAD-box helicase 1 - Plasmodium
falciparum
Length = 457
Score = 60.9 bits (141), Expect = 3e-08
Identities = 44/135 (32%), Positives = 64/135 (47%), Gaps = 21/135 (15%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALEK 489
F L L + SGF+ PS +Q +P G D+L +AKSG GKT VF + L++
Sbjct: 57 FKDFFLKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQ 116
Query: 490 L-----------------NLNNG----LQVMILTPTREIAAQICDVIKQIGSHHKGLNVE 606
L N NNG ++ + L TRE+A QI + + + K + E
Sbjct: 117 LDTNENQDMQDTKEMNNDNNNNGDNKFVRCLGLAHTRELAYQIKNEFDRFSKYLKNVRCE 176
Query: 607 XVMGGLSVNEXIAKF 651
V GG+S+N+ I F
Sbjct: 177 VVYGGISMNKHIKLF 191
>UniRef50_A7AWZ5 Cluster: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein; n=1;
Babesia bovis|Rep: DEAD/DEAH box helicase and helicase
conserved C-terminal domain containing protein - Babesia
bovis
Length = 994
Score = 60.9 bits (141), Expect = 3e-08
Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 6/117 (5%)
Frame = +1
Query: 310 FTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE- 486
F+ L + L L ++KP PIQ+ +P CG D+L A++G+GKT+ + + A+
Sbjct: 390 FSQCGLPDPILSLLQRRNYEKPFPIQMQCIPALMCGRDVLAIAETGSGKTMAYLLPAIRH 449
Query: 487 -----KLNLNNGLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSVNEXI 642
KL N G+ V+I+ PTRE+A+QI V G+ + V GG + E +
Sbjct: 450 VLYQPKLRENEGMIVLIIAPTRELASQI-GVESSKLCKLVGIRTKAVYGGSPIGEQL 505
>UniRef50_Q66HG7 Cluster: Probable ATP-dependent RNA helicase DDX59;
n=4; Tetrapoda|Rep: Probable ATP-dependent RNA helicase
DDX59 - Rattus norvegicus (Rat)
Length = 589
Score = 60.9 bits (141), Expect = 3e-08
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Frame = +1
Query: 349 LISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSI-IALEKLNLNNGLQVMIL 525
L SG++ P+PIQ+ +P+G G D+L A +G+GKT F + + + L + +IL
Sbjct: 218 LKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIIRALPEDKTPSALIL 277
Query: 526 TPTREIAAQICDVIKQIGSHHKGLNVEXVMGGL 624
TPTRE+A QI K++ + ++GGL
Sbjct: 278 TPTRELAIQIERQAKELMRGLPRMKTVLLVGGL 310
>UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;
Saccharomycetales|Rep: ATP-dependent RNA helicase DBP10
- Saccharomyces cerevisiae (Baker's yeast)
Length = 995
Score = 60.9 bits (141), Expect = 3e-08
Identities = 39/115 (33%), Positives = 65/115 (56%), Gaps = 5/115 (4%)
Frame = +1
Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 486
+F S LS+ L + GF++P+PIQ +PL D++ A++G+GKT F + +E
Sbjct: 138 SFPSFGLSKIVLNNIKRKGFRQPTPIQRKTIPLILQSRDIVGMARTGSGKTAAFILPMVE 197
Query: 487 KLNLNN---GLQVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVM--GGLSVNE 636
KL ++ G + +IL+P+RE+A Q +V K +G + V+ GG S+ E
Sbjct: 198 KLKSHSGKIGARAVILSPSRELAMQTFNVFKDFA---RGTELRSVLLTGGDSLEE 249
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 587,485,923
Number of Sequences: 1657284
Number of extensions: 10761937
Number of successful extensions: 28450
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 26960
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27816
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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