Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_P06
         (652 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       54   2e-09
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           24   0.21 
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     23   1.9  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   2.6  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   2.6  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   3.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   4.5  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   4.5  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 53.6 bits (123), Expect = 2e-09
 Identities = 38/119 (31%), Positives = 61/119 (51%), Gaps = 11/119 (9%)
 Frame = +1

Query: 307 TFTSMLLSEFTLXGLISSGFQKPSPIQLHGVPLGKCGFDLLLEAKSGTGKTVVFSIIALE 486
           +F +  L    L  +  SG++KP+P+Q H +P+   G DL+  A++G+GKT  F++  + 
Sbjct: 197 SFEAAGLRNIVLDNIKKSGYKKPTPVQKHALPIIMNGRDLMACAQTGSGKTAAFAVPIIN 256

Query: 487 KLNLNNGL-----------QVMILTPTREIAAQICDVIKQIGSHHKGLNVEXVMGGLSV 630
            L L   +           QV+I++PTRE+  QI   I +  S +  L      GG SV
Sbjct: 257 TL-LERSVDLVVTSTYCEPQVVIVSPTRELTIQIWQQIVKF-SLNSILKTVVAYGGTSV 313


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 23.8 bits (49), Expect(2) = 0.21
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 411 MWFRFVTRSKVWNW 452
           M+F  VTR  VW W
Sbjct: 447 MFFNMVTRDSVWCW 460



 Score = 21.0 bits (42), Expect(2) = 0.21
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +3

Query: 306 YVHFHASFRIYTXRIDIIGVPKTISNSTSW 395
           + H  +SFR +     I+G  KT   +T +
Sbjct: 392 FFHPMSSFREFAVSTSILGDKKTAEENTDY 421


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 11/17 (64%), Positives = 12/17 (70%)
 Frame = +1

Query: 148 EKSQRTLAEPSNISESN 198
           E S+   AEPSNI ESN
Sbjct: 555 ETSKGINAEPSNIEESN 571


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/41 (21%), Positives = 20/41 (48%)
 Frame = -3

Query: 575 ICLITSHICAAISRVGVKIITCKPLLRFSFSNAIIENTTVF 453
           I  +   +C+   ++   ++T +P L  +F N +    TV+
Sbjct: 234 ITRVIPQVCSGNCKLNDILLTVRPHLELTFENILSHINTVY 274


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/41 (21%), Positives = 20/41 (48%)
 Frame = -3

Query: 575 ICLITSHICAAISRVGVKIITCKPLLRFSFSNAIIENTTVF 453
           I  +   +C+   ++   ++T +P L  +F N +    TV+
Sbjct: 234 ITRVIPQVCSGNCKLNDILLTVRPHLELTFENILSHINTVY 274


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +3

Query: 585 PQGSECRXCNGRIIC 629
           P G EC+ CN +  C
Sbjct: 432 PIGCECKTCNSKTKC 446


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +3

Query: 468 FYNSIRKTKS**WFASNDLDTYTRNSST 551
           F  S RKT    +F    L TY  N+ST
Sbjct: 272 FVGSCRKTDQILYFIRGCLQTYLINAST 299


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 12/28 (42%), Positives = 14/28 (50%)
 Frame = +3

Query: 468 FYNSIRKTKS**WFASNDLDTYTRNSST 551
           F  S RKT    +F    L TY  N+ST
Sbjct: 310 FVGSCRKTDQILYFIRGCLQTYLINAST 337


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,819
Number of Sequences: 438
Number of extensions: 3086
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)