Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_P05
         (610 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   3.5  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   8.1  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   8.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    21   8.1  

>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.2 bits (45), Expect = 3.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -2

Query: 570 NSFARGRAKYAQHKTXY 520
           N F RGR K ++H+  Y
Sbjct: 18  NEFYRGRKKLSKHQQIY 34


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/35 (25%), Positives = 19/35 (54%)
 Frame = +1

Query: 238 TGLXIALKGHLYIYPLRTYLLNKVEYLFTPVLLNA 342
           +GL   + G++  YP     ++   + F P+++NA
Sbjct: 163 SGLFALITGNVLFYPFLPSDVSYNLFSFVPLVVNA 197


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = -3

Query: 473 NLTIIRLINKFPMQKFVLALATINVN 396
           ++ I+  +NK    K ++ L TIN N
Sbjct: 103 DIEILGYVNKAKFGKLLINLYTINYN 128


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 8.1
 Identities = 9/35 (25%), Positives = 19/35 (54%)
 Frame = +1

Query: 238 TGLXIALKGHLYIYPLRTYLLNKVEYLFTPVLLNA 342
           +GL   + G++  YP     ++   + F P+++NA
Sbjct: 119 SGLFALITGNVLFYPFLPSDVSYNLFSFVPLVVNA 153


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,533
Number of Sequences: 336
Number of extensions: 3084
Number of successful extensions: 8
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15457268
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)