Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_P05
         (610 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0459 + 3546101-3548771,3548871-3549238                           28   5.0  
07_03_0697 + 20759176-20759817,20760592-20760708,20761422-207616...    28   6.7  

>11_01_0459 + 3546101-3548771,3548871-3549238
          Length = 1012

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 18/51 (35%), Positives = 26/51 (50%)
 Frame = -3

Query: 482 ISNNLTIIRLINKFPMQKFVLALATINVNRSVHSVLM*IWXFSALN*AFNN 330
           ++ N  + +LIN FP +  VL LA+ N   ++ S    I     LN A NN
Sbjct: 152 LNGNHLVGQLINNFPPKLQVLTLASNNFTGTIPSSFANITELRNLNFASNN 202


>07_03_0697 +
           20759176-20759817,20760592-20760708,20761422-20761696,
           20761906-20762068,20762293-20762421,20762989-20763713,
           20763853-20764081
          Length = 759

 Score = 27.9 bits (59), Expect = 6.7
 Identities = 13/38 (34%), Positives = 23/38 (60%)
 Frame = +1

Query: 283 LRTYLLNKVEYLFTPVLLNA*FKALNXHIYIKTEWTDL 396
           LRTY LN++ Y +  V+ ++   A   H+Y+  + T+L
Sbjct: 336 LRTYELNRLRYYYAVVVCDS--SATANHLYMNLDGTEL 371


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,269,736
Number of Sequences: 37544
Number of extensions: 259572
Number of successful extensions: 492
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 492
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1454766756
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)