Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_P02
(649 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC000241-1|AAH00241.1| 242|Homo sapiens mitochondrial ribosomal... 120 4e-27
AK222995-1|BAD96715.1| 242|Homo sapiens mitochondrial ribosomal... 120 4e-27
AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein. 31 3.5
L23320-1|AAA16121.1| 1148|Homo sapiens replication factor C larg... 30 6.2
CR533508-1|CAG38539.1| 473|Homo sapiens MGC8407 protein. 30 8.2
BC089428-1|AAH89428.1| 1192|Homo sapiens PLEKHG1 protein protein. 30 8.2
AL450339-2|CAI12939.1| 1385|Homo sapiens pleckstrin homology dom... 30 8.2
AL035086-3|CAI42790.1| 1385|Homo sapiens pleckstrin homology dom... 30 8.2
AB033035-1|BAA86523.1| 1113|Homo sapiens KIAA1209 protein protein. 30 8.2
>BC000241-1|AAH00241.1| 242|Homo sapiens mitochondrial ribosomal
protein S7 protein.
Length = 242
Score = 120 bits (289), Expect = 4e-27
Identities = 60/145 (41%), Positives = 93/145 (64%)
Frame = +1
Query: 202 DYYQNPIFRKEDQVKLIADSDLKNRATVPVKPPTVSETSSVYFDPLVNKVINHVMEKGNK 381
+YY+ P+ ++ K + + LK + P +TSSV+ DP+++K N +M GNK
Sbjct: 49 EYYRKPVEELTEEEKYVRE--LKKTQLIKAAP--AGKTSSVFEDPVISKFTNMMMIGGNK 104
Query: 382 RLARQLVEKAFENIKRKQIERYHLASTPEEKAKIXLNPKDILYKAVENCKPLLQLQPIKR 561
LAR L+ + E +KRKQ E+YH AS EE+A I NP I ++A++NC+P++ L PI +
Sbjct: 105 VLARSLMIQTLEAVKRKQFEKYHAASA-EEQATIERNPYTIFHQALKNCEPMIGLVPILK 163
Query: 562 GGITYQVPGPITEKRSLFLAIKWLL 636
GG YQVP P+ ++R FLA+KW++
Sbjct: 164 GGRFYQVPVPLPDRRRRFLAMKWMI 188
>AK222995-1|BAD96715.1| 242|Homo sapiens mitochondrial ribosomal
protein S7 variant protein.
Length = 242
Score = 120 bits (289), Expect = 4e-27
Identities = 60/145 (41%), Positives = 93/145 (64%)
Frame = +1
Query: 202 DYYQNPIFRKEDQVKLIADSDLKNRATVPVKPPTVSETSSVYFDPLVNKVINHVMEKGNK 381
+YY+ P+ ++ K + + LK + P +TSSV+ DP+++K N +M GNK
Sbjct: 49 EYYRKPVEELTEEEKYVRE--LKKTQLIKAAP--AGKTSSVFEDPVISKFTNMMMIGGNK 104
Query: 382 RLARQLVEKAFENIKRKQIERYHLASTPEEKAKIXLNPKDILYKAVENCKPLLQLQPIKR 561
LAR L+ + E +KRKQ E+YH AS EE+A I NP I ++A++NC+P++ L PI +
Sbjct: 105 VLARSLMIQTLEAVKRKQFEKYHAASA-EEQATIERNPYTIFHQALKNCEPMIGLVPILK 163
Query: 562 GGITYQVPGPITEKRSLFLAIKWLL 636
GG YQVP P+ ++R FLA+KW++
Sbjct: 164 GGRFYQVPVPLPDRRRRFLAMKWMI 188
>AB011118-1|BAA25472.2| 1919|Homo sapiens KIAA0546 protein protein.
Length = 1919
Score = 31.1 bits (67), Expect = 3.5
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 235 DQVKLIADSDLKNRATVPVKPPTVSETSSVYFDP 336
++V + DS+ + A PV+PP SE S YF P
Sbjct: 538 EEVAMDTDSETSSPAPSPVQPPFFSECSLGYFSP 571
>L23320-1|AAA16121.1| 1148|Homo sapiens replication factor C large
subunit protein.
Length = 1148
Score = 30.3 bits (65), Expect = 6.2
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 1/95 (1%)
Frame = +1
Query: 139 SSTRTLSKLQIRNYAKATSFPDYYQNPIFRKEDQVKLIADSDL-KNRATVPVKPPTVSET 315
SS + SKL I K +S+ + RKE+ +KL ++ K + P K +VS
Sbjct: 311 SSPKASSKLAIMKRKKESSYKEIEPVASKRKENAIKLKGETKTPKKTKSSPAKKESVSPE 370
Query: 316 SSVYFDPLVNKVINHVMEKGNKRLARQLVEKAFEN 420
S +++ +G K L + + K EN
Sbjct: 371 DSEKKRTNYQAYRSYLNREGPKALGSKEIPKGAEN 405
>CR533508-1|CAG38539.1| 473|Homo sapiens MGC8407 protein.
Length = 473
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 100 IFFYRRLKNSSFNSSTRTLSKLQIRNYAKATSFPDYYQNPIFRKE 234
+ +Y RLKNS S L+KL+ + P+Y NP F +E
Sbjct: 151 LVYYNRLKNSKIVISDFHLAKLENGLIKEPCGTPEYLGNPPFYEE 195
>BC089428-1|AAH89428.1| 1192|Homo sapiens PLEKHG1 protein protein.
Length = 1192
Score = 29.9 bits (64), Expect = 8.2
Identities = 26/76 (34%), Positives = 38/76 (50%)
Frame = +1
Query: 241 VKLIADSDLKNRATVPVKPPTVSETSSVYFDPLVNKVINHVMEKGNKRLARQLVEKAFEN 420
+ L+ DS N ++P KP VS+ S D + N + N++ K N+ AR + AF
Sbjct: 616 LSLLYDSPSGN-LSMPHKP--VSDKLSEEVDEIWNDLENYI--KKNEDKARDRLLAAFPV 670
Query: 421 IKRKQIERYHLASTPE 468
K +R H STPE
Sbjct: 671 SKDDVPDRLHAESTPE 686
>AL450339-2|CAI12939.1| 1385|Homo sapiens pleckstrin homology domain
containing, family G (with RhoGef domain) member 1
protein.
Length = 1385
Score = 29.9 bits (64), Expect = 8.2
Identities = 26/76 (34%), Positives = 38/76 (50%)
Frame = +1
Query: 241 VKLIADSDLKNRATVPVKPPTVSETSSVYFDPLVNKVINHVMEKGNKRLARQLVEKAFEN 420
+ L+ DS N ++P KP VS+ S D + N + N++ K N+ AR + AF
Sbjct: 809 LSLLYDSPSGN-LSMPHKP--VSDKLSEEVDEIWNDLENYI--KKNEDKARDRLLAAFPV 863
Query: 421 IKRKQIERYHLASTPE 468
K +R H STPE
Sbjct: 864 SKDDVPDRLHAESTPE 879
>AL035086-3|CAI42790.1| 1385|Homo sapiens pleckstrin homology domain
containing, family G (with RhoGef domain) member 1
protein.
Length = 1385
Score = 29.9 bits (64), Expect = 8.2
Identities = 26/76 (34%), Positives = 38/76 (50%)
Frame = +1
Query: 241 VKLIADSDLKNRATVPVKPPTVSETSSVYFDPLVNKVINHVMEKGNKRLARQLVEKAFEN 420
+ L+ DS N ++P KP VS+ S D + N + N++ K N+ AR + AF
Sbjct: 809 LSLLYDSPSGN-LSMPHKP--VSDKLSEEVDEIWNDLENYI--KKNEDKARDRLLAAFPV 863
Query: 421 IKRKQIERYHLASTPE 468
K +R H STPE
Sbjct: 864 SKDDVPDRLHAESTPE 879
>AB033035-1|BAA86523.1| 1113|Homo sapiens KIAA1209 protein protein.
Length = 1113
Score = 29.9 bits (64), Expect = 8.2
Identities = 26/76 (34%), Positives = 38/76 (50%)
Frame = +1
Query: 241 VKLIADSDLKNRATVPVKPPTVSETSSVYFDPLVNKVINHVMEKGNKRLARQLVEKAFEN 420
+ L+ DS N ++P KP VS+ S D + N + N++ K N+ AR + AF
Sbjct: 537 LSLLYDSPSGN-LSMPHKP--VSDKLSEEVDEIWNDLENYI--KKNEDKARDRLLAAFPV 591
Query: 421 IKRKQIERYHLASTPE 468
K +R H STPE
Sbjct: 592 SKDDVPDRLHAESTPE 607
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,748,250
Number of Sequences: 237096
Number of extensions: 1734859
Number of successful extensions: 3774
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3772
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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