Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_P02
         (649 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-45|CAC70123.2|  222|Caenorhabditis elegans Hypothetical p...    84   9e-17
U50193-10|AAP68919.1| 1098|Caenorhabditis elegans Hypothetical p...    35   0.043
U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical pr...    35   0.043
Z66500-5|CAA91306.1|  168|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AF016425-1|AAD34668.1|  458|Caenorhabditis elegans Hypothetical ...    30   1.6  
AC006685-1|AAK84571.1|  154|Caenorhabditis elegans Hypothetical ...    29   2.1  
U64599-2|ABB88205.1|  420|Caenorhabditis elegans Unidentified vi...    29   3.8  
U64599-1|AAB04560.3|  426|Caenorhabditis elegans Unidentified vi...    29   3.8  
Z93785-2|CAB07859.2| 1335|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z79755-7|CAB02103.1|  466|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z82274-7|CAD21646.1|  331|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>Z99281-45|CAC70123.2|  222|Caenorhabditis elegans Hypothetical
           protein Y57G11C.34 protein.
          Length = 222

 Score = 83.8 bits (198), Expect = 9e-17
 Identities = 50/145 (34%), Positives = 80/145 (55%)
 Frame = +1

Query: 199 PDYYQNPIFRKEDQVKLIADSDLKNRATVPVKPPTVSETSSVYFDPLVNKVINHVMEKGN 378
           P  +++P+   ++  K +   D +N   + +K      T   Y D +++K+I    + G 
Sbjct: 26  PRVFRDPVTNVQELRKPLDSDDERN--FLFLKAMKSDATPVFYRDHVIDKLIRVCTKDGE 83

Query: 379 KRLARQLVEKAFENIKRKQIERYHLASTPEEKAKIXLNPKDILYKAVENCKPLLQLQPIK 558
           K  +R+ V  A E IKR+Q + +  AS  EEK  I L+P  +  K ++NC PL++LQ + 
Sbjct: 84  KETSRKNVLSALEIIKRRQYKAWAKASE-EEKKSIELDPFLVAKKGIKNCHPLMKLQGVT 142

Query: 559 RGGITYQVPGPITEKRSLFLAIKWL 633
           RGG TYQVP PI E  + F A+K +
Sbjct: 143 RGGTTYQVPFPIEEPEAEFRAMKMM 167


>U50193-10|AAP68919.1| 1098|Caenorhabditis elegans Hypothetical
           protein ZK328.7b protein.
          Length = 1098

 Score = 35.1 bits (77), Expect = 0.043
 Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
 Frame = +1

Query: 385 LARQLVEKAFENIKRK-----QIERYHLASTPEEKAKIXLNPKDILYKAVENCKPLLQLQ 549
           LA+Q  +K+FEN ++      ++ R  L S P     + L   D+LY AVE C     L 
Sbjct: 424 LAKQSKDKSFENFRQHIENLVEMLRNQLQSFPFGLDYLSLFSSDLLYSAVEQCFDFYPLV 483

Query: 550 PIK 558
           PIK
Sbjct: 484 PIK 486


>U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical
           protein ZK328.7a protein.
          Length = 1332

 Score = 35.1 bits (77), Expect = 0.043
 Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
 Frame = +1

Query: 385 LARQLVEKAFENIKRK-----QIERYHLASTPEEKAKIXLNPKDILYKAVENCKPLLQLQ 549
           LA+Q  +K+FEN ++      ++ R  L S P     + L   D+LY AVE C     L 
Sbjct: 424 LAKQSKDKSFENFRQHIENLVEMLRNQLQSFPFGLDYLSLFSSDLLYSAVEQCFDFYPLV 483

Query: 550 PIK 558
           PIK
Sbjct: 484 PIK 486


>Z66500-5|CAA91306.1|  168|Caenorhabditis elegans Hypothetical
           protein T05C12.5 protein.
          Length = 168

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 18/61 (29%), Positives = 32/61 (52%)
 Frame = +1

Query: 250 IADSDLKNRATVPVKPPTVSETSSVYFDPLVNKVINHVMEKGNKRLARQLVEKAFENIKR 429
           I+D++     T+ V P   ++TS+       + V    +E  N +L RQL+EK  + +K+
Sbjct: 3   ISDTERHQHYTISVCPVLQTDTSTT------SSVAKRQIESKNAQLLRQLIEKKNKKLKK 56

Query: 430 K 432
           K
Sbjct: 57  K 57


>AF016425-1|AAD34668.1|  458|Caenorhabditis elegans Hypothetical
           protein F59A7.1 protein.
          Length = 458

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = -3

Query: 623 IAKNNDLFSVIGPGTWYVIPPLLMGCNCNNGLQFSTALYKMSLGFN 486
           I K ND +S+I    W V P    G    NG   S   Y M L ++
Sbjct: 399 ITKTNDKYSIID---WQVYPASFNGILTGNGFTLSPVTYSMELQYD 441


>AC006685-1|AAK84571.1|  154|Caenorhabditis elegans Hypothetical
           protein T13G4.2 protein.
          Length = 154

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
 Frame = +2

Query: 473 KPKXS*ILRTFYIKPLKIANHCYNYSPSRGV----VSHTRCL 586
           +P+   I R  Y +PL   +HC+  +PS  +     SH+ C+
Sbjct: 47  QPQKRGIERGVYYRPLNFTDHCFKMTPSANIGTMPCSHSMCV 88


>U64599-2|ABB88205.1|  420|Caenorhabditis elegans Unidentified
           vitellogenin-linkedtranscript protein 6, isoform b
           protein.
          Length = 420

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/60 (26%), Positives = 28/60 (46%)
 Frame = -2

Query: 345 INERIKVNGRRFRNRRWLHRYSCSVLQIRICNEFHLIFFSKYWILIIVWKACRLRIISNL 166
           + E  K + R  RN+R    Y      ++    FHL+ +S +W+  +     R+RI + L
Sbjct: 210 LREAAKGSRRLHRNKRSRSSYQRVTRSVQRVVLFHLLCWSPFWLFNLFSAIFRVRITTQL 269


>U64599-1|AAB04560.3|  426|Caenorhabditis elegans Unidentified
           vitellogenin-linkedtranscript protein 6, isoform a
           protein.
          Length = 426

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/60 (26%), Positives = 28/60 (46%)
 Frame = -2

Query: 345 INERIKVNGRRFRNRRWLHRYSCSVLQIRICNEFHLIFFSKYWILIIVWKACRLRIISNL 166
           + E  K + R  RN+R    Y      ++    FHL+ +S +W+  +     R+RI + L
Sbjct: 210 LREAAKGSRRLHRNKRSRSSYQRVTRSVQRVVLFHLLCWSPFWLFNLFSAIFRVRITTQL 269


>Z93785-2|CAB07859.2| 1335|Caenorhabditis elegans Hypothetical protein
            W09D10.2 protein.
          Length = 1335

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 273  VLQIRICNEFHLIFFSKYWILIIVW 199
            V Q+ I N FHL  F +YW   + W
Sbjct: 1182 VTQLIIVNTFHLALFVQYWTWPMFW 1206


>Z79755-7|CAB02103.1|  466|Caenorhabditis elegans Hypothetical
           protein F43G9.10 protein.
          Length = 466

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
 Frame = +1

Query: 226 RKEDQVKLIADSDLKNRATVPVKPPTVSETSSVYFDPLVNKVINHVME-KGNKRLARQLV 402
           RK +  KL+     +  A    K     + SSV  D     +     + +  KRL R   
Sbjct: 261 RKRESAKLVEKVLQEEEAAEKRKTEDRVDLSSVLTDDETENMAYEAWKLREMKRLKRNRD 320

Query: 403 EKAFENIKRKQIERYHLASTPEEKAKIXLNPKDILYK 513
           E+     ++ ++++ H  S  E    + LNPK I  K
Sbjct: 321 EREEAAREKAELDKIHAMSEEERLKYLRLNPKVITNK 357


>Z82274-7|CAD21646.1|  331|Caenorhabditis elegans Hypothetical
           protein JC8.13 protein.
          Length = 331

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
 Frame = +1

Query: 97  LIFFYRRLKNSSFNSSTRTLSKLQIRNYAKATSFPDYYQ--NPIFRK--EDQVKLIADSD 264
           L  F R+L + SFN     +S     NY +   F D +Q  +P+ +    D V ++  S 
Sbjct: 203 LYLFRRKLPHESFNLIQSIISSFYSSNYRR---FFDIFQQLDPLLKHSLSDCVSILRQSA 259

Query: 265 LKNRATVPVKPPTVSETSSVYFD 333
           +KN  +V  K P     S +  D
Sbjct: 260 MKN-ISVAFKTPVARLPSQLLSD 281


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,935,605
Number of Sequences: 27780
Number of extensions: 289813
Number of successful extensions: 958
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 909
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)