Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_O23
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0274 + 16426892-16427101,16427193-16427572,16427655-164279...    33   0.26 
11_01_0268 - 2029007-2029464,2029521-2029615,2030815-2031077,203...    29   4.3  
09_02_0540 + 10410372-10411331                                         28   7.5  
06_03_0636 + 22983898-22985043                                         28   7.5  
10_08_0911 - 21499196-21499236,21499368-21499488,21499665-214997...    27   9.9  

>10_08_0274 +
           16426892-16427101,16427193-16427572,16427655-16427927,
           16428315-16428390,16428476-16428655
          Length = 372

 Score = 32.7 bits (71), Expect = 0.26
 Identities = 22/85 (25%), Positives = 39/85 (45%)
 Frame = +2

Query: 281 STCKHFNELXNTDQQLWKEKLKELIPDAAFVVXESDCHDGDWLEEIKGFYYIKNYVFSEL 460
           ST   F E   T    W++K++E+    +++      H G    E     Y+ + + S+L
Sbjct: 176 STLAPFYESDTTISAYWRDKIREMTESISYLCTRKVSHGGLANRE----SYVLD-LDSKL 230

Query: 461 KTMSPTHYCKRDDLTKQDVRDFFNV 535
           K ++   Y      T+ DV DFF++
Sbjct: 231 KLINVARYSTDGSTTRDDVVDFFDL 255


>11_01_0268 -
           2029007-2029464,2029521-2029615,2030815-2031077,
           2031154-2031279,2031404-2032996
          Length = 844

 Score = 28.7 bits (61), Expect = 4.3
 Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
 Frame = +2

Query: 206 IYSLPXEVISIILKNNDCQE-ILNFSSTCKHFNELXNTDQQLWKEKLKELIPDAAFVVXE 382
           I SL    +SI  K    +  +LNF  +C    EL      LW+E       D  +   E
Sbjct: 536 ITSLRKLELSIAFKERKGRHALLNFFRSCTELKELV-----LWRE-------DKVYFEEE 583

Query: 383 SDCHDGDWLEEIKGFYYIKNYV 448
            D H  DW   +K    +K+++
Sbjct: 584 CDVHSDDWSSALKDIACLKSHL 605


>09_02_0540 + 10410372-10411331
          Length = 319

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = +2

Query: 194 EELSIYSLPXEVISIILKNNDCQEILNFSSTCKHFNELXNTDQQLW 331
           EE    SLP +V+++IL+        +F+ TC+H+    +     W
Sbjct: 2   EERDWSSLPSDVLAVILERLRWSSHPSFALTCRHWRSAVSPFYPAW 47


>06_03_0636 + 22983898-22985043
          Length = 381

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +2

Query: 350 LIPDAAFVVXESDCHDGD 403
           +IPD   VV  SDCH GD
Sbjct: 327 VIPDGRVVVIGSDCHGGD 344


>10_08_0911 - 21499196-21499236,21499368-21499488,21499665-21499789,
            21500187-21500418,21500488-21500668,21501342-21501438,
            21501641-21501779,21502024-21502351,21502890-21503137,
            21503270-21503543,21504200-21504291,21504451-21504521,
            21505091-21505181,21506526-21507380,21507482-21507594,
            21508007-21508074,21508655-21508835,21509084-21509186,
            21509273-21509379,21510046-21511584,21511661-21511771,
            21511856-21511908,21511988-21512063,21512147-21512366,
            21512477-21512901,21513193-21513372,21513503-21515474
          Length = 2680

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 12/28 (42%), Positives = 17/28 (60%)
 Frame = +2

Query: 506  KQDVRDFFNVAISTKMSLAYAINILQDF 589
            K D+ +FF + +  KMS+A   N LQ F
Sbjct: 2192 KDDITEFFRLPLQEKMSVAIPPNGLQGF 2219


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,961,788
Number of Sequences: 37544
Number of extensions: 230509
Number of successful extensions: 418
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 418
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)