Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_O23
         (653 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z37139-2|CAA85486.1|  384|Caenorhabditis elegans Hypothetical pr...    29   2.2  
U40427-3|AAA81469.1|  320|Caenorhabditis elegans Hypothetical pr...    29   2.2  
U13875-10|AAA21159.1|  332|Caenorhabditis elegans F-box synaptic...    29   2.9  
U40419-6|AAL02445.2|  408|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z70286-3|CAA94296.1|  298|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical pr...    27   8.8  

>Z37139-2|CAA85486.1|  384|Caenorhabditis elegans Hypothetical
           protein C14B1.3 protein.
          Length = 384

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 14/42 (33%), Positives = 22/42 (52%)
 Frame = +2

Query: 212 SLPXEVISIILKNNDCQEILNFSSTCKHFNELXNTDQQLWKE 337
           ++P E  S I +  D + +LN    C  FN+L ++D   W E
Sbjct: 26  TVPNECFSPIFRRLDKKSLLNCQLACHRFNDLISSD-SFWIE 66


>U40427-3|AAA81469.1|  320|Caenorhabditis elegans Hypothetical
           protein F43C9.1 protein.
          Length = 320

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 11/36 (30%), Positives = 22/36 (61%)
 Frame = +2

Query: 200 LSIYSLPXEVISIILKNNDCQEILNFSSTCKHFNEL 307
           +S++ LP E++  + +N + Q+I    S C+ FN +
Sbjct: 1   MSMHQLPSEMLRSVFQNVNSQDIPKLRSVCQMFNSV 36


>U13875-10|AAA21159.1|  332|Caenorhabditis elegans F-box synaptic
           protein protein 1 protein.
          Length = 332

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +2

Query: 197 ELSIYSLPXEVISIILKNNDCQEILNFSSTCKHFNE-LXNTDQQLWKEKLKELIPDAA 367
           E+S   LP +V++ I +    +++ +   TC  +N  L   D  +W+  L + +P+AA
Sbjct: 79  EVSASRLPLKVLNQIFQYLPLKDLRSAMLTCHSWNNALSMEDSDIWQYLLGKKLPEAA 136


>U40419-6|AAL02445.2|  408|Caenorhabditis elegans Hypothetical
           protein C27F2.7 protein.
          Length = 408

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = +2

Query: 215 LPXEVISIILKNNDCQEILNFSSTCKHFNEL 307
           LP   I  I+   D Q +LN S TC H  +L
Sbjct: 130 LPDTDICQIMSFLDAQSLLNLSQTCSHLRQL 160


>Z70286-3|CAA94296.1|  298|Caenorhabditis elegans Hypothetical
           protein K08C7.7 protein.
          Length = 298

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/38 (36%), Positives = 21/38 (55%)
 Frame = +2

Query: 194 EELSIYSLPXEVISIILKNNDCQEILNFSSTCKHFNEL 307
           E   I  LP E+I  +LKN   +E+ + + TCK  + L
Sbjct: 4   ENFPILELPPELILHVLKNYCYEELNDITVTCKTLHAL 41


>Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical
           protein C49C3.4 protein.
          Length = 1566

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +2

Query: 446 VFSELKTMSPTHYCKRDDLTKQDVRDFFNVAISTKMSLAYAINIL 580
           VF+ +   +  HY   +D    DV   FN  I+  M  +Y  N+L
Sbjct: 755 VFNRIAAQTNGHYIVANDTIGVDVNSDFNKIIANFMKTSYNQNLL 799


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,525,807
Number of Sequences: 27780
Number of extensions: 252800
Number of successful extensions: 519
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 519
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)