Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_O19
         (352 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    22   2.4  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   3.2  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   5.6  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   5.6  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    21   5.6  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    21   5.6  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          21   5.6  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          21   5.6  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          21   5.6  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          21   5.6  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          21   5.6  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          21   5.6  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          21   5.6  
AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter...    21   5.6  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    21   5.6  
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    20   7.4  

>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.8 bits (44), Expect = 2.4
 Identities = 11/27 (40%), Positives = 12/27 (44%)
 Frame = +2

Query: 71  SXSXITTKVPPTSRTGMLSSLVSTGTP 151
           S   IT + PP   T      VS GTP
Sbjct: 604 STKGITIQEPPQWHTRSTEKRVSAGTP 630


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 189 WILXFPILLCTLPGVPVDTSDESMP 115
           W+  F + L T P VPV+  D  MP
Sbjct: 319 WLPFFILYLAT-PFVPVEPPDILMP 342


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 218 KVVNYNHLMPTRYTVDFSFEKFSAKDLKDPA 310
           K++ YN    ++Y +  S  +  +  +KDPA
Sbjct: 387 KILGYNLEAASKYQIVPSALEIFSTSMKDPA 417


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +2

Query: 218 KVVNYNHLMPTRYTVDFSFEKFSAKDLKDPA 310
           K++ YN    ++Y +  S  +  +  +KDPA
Sbjct: 387 KILGYNLEAASKYQIVPSALEIFSTSMKDPA 417


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 215 VKVVNYNHLMPTRYTV 262
           V V+N++H  P RY +
Sbjct: 344 VLVLNFHHRTPDRYVM 359


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholine
           receptor alpha6subunit protein.
          Length = 529

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = +2

Query: 215 VKVVNYNHLMPTRYTV 262
           V V+N++H  P RY +
Sbjct: 344 VLVLNFHHRTPDRYVM 359


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 156 LPGVPVDTSDE 124
           LPG P  TSDE
Sbjct: 136 LPGKPTTTSDE 146


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 156 LPGVPVDTSDE 124
           LPG P  TSDE
Sbjct: 136 LPGKPTTTSDE 146


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 156 LPGVPVDTSDE 124
           LPG P  TSDE
Sbjct: 136 LPGKPTTTSDE 146


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 156 LPGVPVDTSDE 124
           LPG P  TSDE
Sbjct: 136 LPGKPTTTSDE 146


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 156 LPGVPVDTSDE 124
           LPG P  TSDE
Sbjct: 136 LPGKPTTTSDE 146


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 156 LPGVPVDTSDE 124
           LPG P  TSDE
Sbjct: 136 LPGKPTTTSDE 146


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 156 LPGVPVDTSDE 124
           LPG P  TSDE
Sbjct: 136 LPGKPTTTSDE 146


>AY395073-1|AAQ96729.1|  203|Apis mellifera GABA neurotransmitter
           transporter-1A protein.
          Length = 203

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/24 (33%), Positives = 9/24 (37%)
 Frame = -3

Query: 233 YSLQPSRKALSWTSCGFYXFPSSC 162
           Y     R  L W SC  Y    +C
Sbjct: 87  YFFMSMRSELPWGSCNNYWNTKNC 110


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 20.6 bits (41), Expect = 5.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 156 LPGVPVDTSDE 124
           LPG P  TSDE
Sbjct: 136 LPGKPTTTSDE 146


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 20.2 bits (40), Expect = 7.4
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -3

Query: 311 LQGLSGLLR*IFQS*SQLYNVLASSDYSL 225
           L G+ G+L  IF +        AS DYSL
Sbjct: 334 LHGMPGILGGIFGALMAALATEASYDYSL 362


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,986
Number of Sequences: 438
Number of extensions: 2033
Number of successful extensions: 16
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8060325
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)