Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_O14
         (652 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   1.6  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   3.8  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    22   5.0  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   8.8  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 16/54 (29%), Positives = 21/54 (38%)
 Frame = +3

Query: 459 PPEKTGLHRYVFLLYKQPSKLTFDEPRLTNTSSDKRANFKIAEFAXKYNLGDPI 620
           P   + L     L+ K    L  + P   +     R   +IAE A  Y  GDPI
Sbjct: 197 PRHASDLDNCNHLMTKYEPDLDMNHPGFADKEYRARRK-EIAEIAFAYKYGDPI 249


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/22 (45%), Positives = 11/22 (50%)
 Frame = +1

Query: 475 ACTDTCSSCTNNHRSSHSTSRD 540
           ACTD  SSC +    S S   D
Sbjct: 32  ACTDDLSSCWSEDMGSFSLPLD 53


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 472  QACTDTCSSCTNNHRSSHSTSRDSLTLRATNVP 570
            Q   D   + TNN R+  +TS  S+     N+P
Sbjct: 995  QKLCDKTETHTNN-RTHSATSNSSVNANTNNIP 1026


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 442 WDKVSPEFTSLAL 404
           W K+ P FTSL L
Sbjct: 228 WAKLVPHFTSLPL 240


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,034
Number of Sequences: 336
Number of extensions: 3830
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)