Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_O14
(652 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF016423-3|AAB65322.1| 221|Caenorhabditis elegans Hypothetical ... 131 5e-31
AF016423-4|AAX88829.1| 185|Caenorhabditis elegans Hypothetical ... 130 1e-30
AL034365-5|CAA22258.1| 172|Caenorhabditis elegans Hypothetical ... 65 4e-11
Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical p... 33 0.13
U39999-8|AAY44011.1| 146|Caenorhabditis elegans Hypothetical pr... 32 0.41
AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical... 30 1.6
U39999-7|AAY44012.1| 232|Caenorhabditis elegans Hypothetical pr... 29 2.2
AC024881-2|AAK71414.1| 274|Caenorhabditis elegans Serpentine re... 29 2.2
Z92829-7|CAB07347.1| 284|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical pr... 28 5.0
U64851-1|AAC47990.2| 186|Caenorhabditis elegans Ground-like (gr... 27 8.7
AF038618-9|AAB92066.1| 304|Caenorhabditis elegans Hypothetical ... 27 8.7
AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein. 27 8.7
>AF016423-3|AAB65322.1| 221|Caenorhabditis elegans Hypothetical
protein F40A3.3a protein.
Length = 221
Score = 131 bits (316), Expect = 5e-31
Identities = 60/97 (61%), Positives = 73/97 (75%), Gaps = 2/97 (2%)
Frame = +2
Query: 125 RAMSTVA-KSFEASQVVPDVIPK-APAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWD 298
R ++T+A ++F +V+PDV+ P+ ++ VK+ SGVE GN LTPTQVKD P VKWD
Sbjct: 32 RGLATMAAEAFTKHEVIPDVLASNPPSKVVSVKFNSGVEANLGNVLTPTQVKDTPEVKWD 91
Query: 299 AEPGQYYTLAMTDPDAPSRKEPTFREWHHWLVGNIQG 409
AEPG YTL TDPDAPSRKEPT+REWHHWLV NI G
Sbjct: 92 AEPGALYTLIKTDPDAPSRKEPTYREWHHWLVVNIPG 128
Score = 103 bits (247), Expect = 1e-22
Identities = 45/89 (50%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
Frame = +3
Query: 390 WLATS-RANXVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKL-TFDEPRLTNTSSDK 563
WL + N + G+TLS+Y+G+GPP KTGLHRYV+L+YKQ ++ + RLTNTS DK
Sbjct: 121 WLVVNIPGNDIAKGDTLSEYIGAGPPPKTGLHRYVYLIYKQSGRIEDAEHGRLTNTSGDK 180
Query: 564 RANFKIAEFAXKYNLGDPIAGNFYEAQYD 650
R +K A+F K+ LG P+ GN ++A+YD
Sbjct: 181 RGGWKAADFVAKHKLGAPVFGNLFQAEYD 209
>AF016423-4|AAX88829.1| 185|Caenorhabditis elegans Hypothetical
protein F40A3.3b protein.
Length = 185
Score = 130 bits (313), Expect = 1e-30
Identities = 58/90 (64%), Positives = 68/90 (75%), Gaps = 1/90 (1%)
Frame = +2
Query: 143 AKSFEASQVVPDVIPK-APAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKWDAEPGQYY 319
A++F +V+PDV+ P+ ++ VK+ SGVE GN LTPTQVKD P VKWDAEPG Y
Sbjct: 3 AEAFTKHEVIPDVLASNPPSKVVSVKFNSGVEANLGNVLTPTQVKDTPEVKWDAEPGALY 62
Query: 320 TLAMTDPDAPSRKEPTFREWHHWLVGNIQG 409
TL TDPDAPSRKEPT+REWHHWLV NI G
Sbjct: 63 TLIKTDPDAPSRKEPTYREWHHWLVVNIPG 92
Score = 103 bits (247), Expect = 1e-22
Identities = 45/89 (50%), Positives = 63/89 (70%), Gaps = 2/89 (2%)
Frame = +3
Query: 390 WLATS-RANXVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKL-TFDEPRLTNTSSDK 563
WL + N + G+TLS+Y+G+GPP KTGLHRYV+L+YKQ ++ + RLTNTS DK
Sbjct: 85 WLVVNIPGNDIAKGDTLSEYIGAGPPPKTGLHRYVYLIYKQSGRIEDAEHGRLTNTSGDK 144
Query: 564 RANFKIAEFAXKYNLGDPIAGNFYEAQYD 650
R +K A+F K+ LG P+ GN ++A+YD
Sbjct: 145 RGGWKAADFVAKHKLGAPVFGNLFQAEYD 173
>AL034365-5|CAA22258.1| 172|Caenorhabditis elegans Hypothetical
protein Y69E1A.5 protein.
Length = 172
Score = 65.3 bits (152), Expect = 4e-11
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Frame = +2
Query: 131 MSTVAKSFEASQVVPDVIPKAPAALLQVKYPSGVEVKEGNELTPTQVKDEPSVKW---DA 301
MS ++ +F ++ P +I AP L + + G++V+ G + +K+ P +W A
Sbjct: 1 MSDISAAFAQHEITPKIIENAPKQKLHLCW-DGIQVEPGMTMQVRNLKNAP--RWALPGA 57
Query: 302 EPGQYYTLAMTDPDAPSRKEPTFREWHHWLVGNI 403
+P YT+ M DPD SRK P+ EW HWLV NI
Sbjct: 58 DPESIYTVLMIDPDNLSRKNPSVAEWLHWLVCNI 91
Score = 58.0 bits (134), Expect = 5e-09
Identities = 29/85 (34%), Positives = 46/85 (54%)
Frame = +3
Query: 396 ATSRANXVNSGETLSQYVGSGPPEKTGLHRYVFLLYKQPSKLTFDEPRLTNTSSDKRANF 575
A++ + +N G+ Y P +T LHRYV L+++ + R++ RA F
Sbjct: 93 ASNIIDGINGGQHQMAYGSPAPGPRTDLHRYVILMWEHAGR------RISVPKPSSRAKF 146
Query: 576 KIAEFAXKYNLGDPIAGNFYEAQYD 650
+ +F K LGDPIAGNF+ AQ++
Sbjct: 147 NVKQFIEKNKLGDPIAGNFFLAQHE 171
>Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical
protein M163.11 protein.
Length = 224
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/47 (34%), Positives = 25/47 (53%)
Frame = +1
Query: 436 CPSTWALDLRKRQACTDTCSSCTNNHRSSHSTSRDSLTLRATNVPIS 576
C ST+ +K Q C TCS C+++ SS S+S S + ++ S
Sbjct: 18 CTSTFYTTAQKTQYCASTCSLCSDSSDSSSSSSTASTSSSSSTAATS 64
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +1
Query: 436 CPSTWALDLRKRQACTDTCSSCTNNHRSSHSTSRDSLTLRATN 564
C S++ K Q C TCS C+++ SS S+S S + T+
Sbjct: 147 CTSSFYTTAIKTQYCAATCSLCSSSSDSSSSSSTASTSSSCTD 189
>U39999-8|AAY44011.1| 146|Caenorhabditis elegans Hypothetical
protein F41G3.19 protein.
Length = 146
Score = 31.9 bits (69), Expect = 0.41
Identities = 17/46 (36%), Positives = 24/46 (52%)
Frame = +1
Query: 427 AKLCPSTWALDLRKRQACTDTCSSCTNNHRSSHSTSRDSLTLRATN 564
A C ++ L L K Q C TC CT++ +S +TS S + TN
Sbjct: 64 ASYCTNSVYLTLMKTQ-CPKTCGYCTSSSSTSSTTSSSSTCVDLTN 108
>AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical
protein F53G12.3 protein.
Length = 1503
Score = 29.9 bits (64), Expect = 1.6
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = -1
Query: 454 EPTYWDKVSPEFTSLALDVANQPVVPFAKCGFFTGRRIRVGHGQS 320
+ TYWD + + +A P++ ++ + RRIR+GH +
Sbjct: 589 QSTYWDDNDTTYIYTLIGLACIPLICYSIGHYMVERRIRIGHNSA 633
>U39999-7|AAY44012.1| 232|Caenorhabditis elegans Hypothetical
protein F41G3.20 protein.
Length = 232
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +1
Query: 427 AKLCPSTWALDLRKRQACTDTCSSCTNNHRSSHSTS 534
A C ++ L L K+Q C TC CT++ SS S+S
Sbjct: 155 ASYCTNSAYLTLMKQQ-CPKTCGYCTSSSSSSSSSS 189
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 427 AKLCPSTWALDLRKRQACTDTCSSCTNNHRSSHSTSRDSLTLRATNVPIS 576
A C ++ L L K+Q C TC CT++ ++ S+S + L + +S
Sbjct: 101 ASYCANSAYLTLMKQQ-CPKTCGYCTSSSATTTSSSSTCIDLTNASTGVS 149
>AC024881-2|AAK71414.1| 274|Caenorhabditis elegans Serpentine
receptor, class sx protein7 protein.
Length = 274
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/23 (43%), Positives = 16/23 (69%)
Frame = -2
Query: 510 VVCTRGTRICAGLSFPEVQSPRT 442
++C GT + GL+FP++Q RT
Sbjct: 58 IICLLGTMVDVGLAFPDIQLDRT 80
>Z92829-7|CAB07347.1| 284|Caenorhabditis elegans Hypothetical
protein F10A3.11 protein.
Length = 284
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -2
Query: 633 RSCPQSDPLGCTXWRTRQF 577
+SCP D GCT W+ F
Sbjct: 251 KSCPSVDSYGCTNWKNYDF 269
>Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical protein
F54E4.1 protein.
Length = 2948
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = -3
Query: 602 VLXGELGNFEIGTFVARSVSESRLVECELRWLFVQEEHVSVQACLFRRSR 453
V+ LG+ G + + + EC LR+L ++H + CL + R
Sbjct: 1536 VVQSVLGDNTAGGYATAAAGVETVDECGLRYLMAMKQHEYLMVCLPMKQR 1585
>U64851-1|AAC47990.2| 186|Caenorhabditis elegans Ground-like (grd
related) protein12 protein.
Length = 186
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = +1
Query: 385 LAGWQHPGPTX*TPAKLCPSTWALDLR----KRQACTDTCSSCTNNHRSSHSTSRDSLTL 552
L G + G + P CP+T + AC +TC +C R H T + T
Sbjct: 23 LFGGSNCGCSCTPPPSTCPTTCLPIMTCTPPSPPACCNTCGTCNGKRRRRHLTMLSNATY 82
Query: 553 RATNVPISKL 582
A + ++++
Sbjct: 83 VADHEKVNRV 92
>AF038618-9|AAB92066.1| 304|Caenorhabditis elegans Hypothetical
protein F42G8.5 protein.
Length = 304
Score = 27.5 bits (58), Expect = 8.7
Identities = 22/79 (27%), Positives = 30/79 (37%), Gaps = 1/79 (1%)
Frame = +2
Query: 128 AMSTVAKSFEASQVVPDVIPKAPAALLQVKYPSGVEVKEG-NELTPTQVKDEPSVKWDAE 304
AMS V K + ++ P VIP L + P+ + V N L T V S D
Sbjct: 188 AMSNVVKPHDEKKLYPPVIPGCSTLSLHRRSPNNIFVASPYNTLRATSVGRYQSGFLDTN 247
Query: 305 PGQYYTLAMTDPDAPSRKE 361
L P SR++
Sbjct: 248 SIMENRLGSRQPSVASRRQ 266
>AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein.
Length = 1766
Score = 27.5 bits (58), Expect = 8.7
Identities = 15/54 (27%), Positives = 24/54 (44%)
Frame = -1
Query: 229 SAWVFHLQ*SGRRFWYNIRHHLAGLEGLRYGRHRSGQDPNILKKLFVETNEQLC 68
S VF +Q FWYN+ +G + +R G+D + K + +E C
Sbjct: 298 SICVFSMQKVKLTFWYNVDRCRSGTDSIRL--PHIGRDTKCVNKAHIPLDEDSC 349
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,553,575
Number of Sequences: 27780
Number of extensions: 349891
Number of successful extensions: 980
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 975
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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