Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_O13
         (644 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    28   0.076
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.53 
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   6.6  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   6.6  
AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone recepto...    21   8.7  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 27.9 bits (59), Expect = 0.076
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
 Frame = +2

Query: 224 KVEAAESNGKENGTDEAPEDSPAENGDAEXSN-----DASENGDATXKKETGVKRKSV 382
           K+   +   KE   DEA E+   E G+ +  +     D  E+ D   KKE   K+K++
Sbjct: 212 KLVVEKEREKELSDDEAEEEKKEEEGEDKDKDKPKIEDVGEDEDEDTKKEDKKKKKTI 269


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 17/41 (41%), Positives = 19/41 (46%)
 Frame = -2

Query: 466 FFLCWRGFLRYFCLXXGSGLFCCFFIKSHRFPLHTSLFLXC 344
           F LC   F   F +     LFCC FI    F +H  LFL C
Sbjct: 162 FLLCIYHFFCAFIIFTMHLLFCCAFI---FFNMHL-LFLLC 198


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +2

Query: 251 KENGTDEAPEDSPAENGDAEXSNDASENGD 340
           +E G DEA  D   EN  A+     +  GD
Sbjct: 21  EEEGGDEATADELCENRPADEYFRLTTEGD 50


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +2

Query: 251 KENGTDEAPEDSPAENGDAEXSNDASENGD 340
           +E G DEA  D   EN  A+     +  GD
Sbjct: 21  EEEGGDEATADELCENRPADEYFRLTTEGD 50


>AM295016-1|CAL25731.1|   96|Tribolium castaneum ecdysone receptor
           (isoform B) protein.
          Length = 96

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +2

Query: 158 VAPEEVTSTEPKESPVKKSPAXKVEAAE 241
           VAPEE +S     S +  SPA  + + +
Sbjct: 9   VAPEESSSEVTSSSALVMSPANSLASTD 36


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,011
Number of Sequences: 336
Number of extensions: 2188
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)