Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_O13
         (644 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY183376-1|AAO24766.1|  128|Anopheles gambiae cytochrome b5 prot...    27   0.67 
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   1.6  
AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding pr...    25   2.0  
M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   3.6  
U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic aci...    24   4.7  
AY255856-1|AAP13482.1|  248|Anopheles gambiae glutathione transf...    24   4.7  

>AY183376-1|AAO24766.1|  128|Anopheles gambiae cytochrome b5
           protein.
          Length = 128

 Score = 26.6 bits (56), Expect = 0.67
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = +2

Query: 131 ADAAVDKKEVAPEEVTSTEPKESPVKKSPAXKVEAAESN 247
           +DA    K+    E+   E K+ PVKK P  K++  + N
Sbjct: 65  SDAREMMKKFKVGELIEAERKQIPVKKEPDWKMDQQDDN 103


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = +2

Query: 227  VEAAESNGKENGTDEAPEDSPAENGDAEXSNDASEN 334
            ++ A+SNG E+G ++  ED   ++ D + +     N
Sbjct: 1812 LQHADSNGGEDGNEDDDEDDEDDDDDDDDTTTGEGN 1847


>AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding
           protein AgamOBP52 protein.
          Length = 170

 Score = 25.0 bits (52), Expect = 2.0
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +3

Query: 489 IIYAWFTAMHQCPLXFNSHP 548
           +++  FT   +CPL F+ HP
Sbjct: 1   MLFKLFTIPFRCPLFFSKHP 20


>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +3

Query: 60  TCFELFIHFSTLFHFFNS 113
           +CF LF HF  LF F +S
Sbjct: 944 SCFRLFNHFYYLFDFDSS 961


>U03849-1|AAA53488.1|  388|Anopheles gambiae putative nucleic acid
           binding protein protein.
          Length = 388

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = +2

Query: 140 AVDKKEVAPEEVTSTEPKESPVKKSP 217
           AV      P E+  T+P  SP++ +P
Sbjct: 176 AVQPAPTQPHELVGTDPLSSPLQAAP 201


>AY255856-1|AAP13482.1|  248|Anopheles gambiae glutathione
           transferase o1 protein.
          Length = 248

 Score = 23.8 bits (49), Expect = 4.7
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
 Frame = +2

Query: 116 PXQQLADAAVDKKEVAPEEV--TSTEPKESPVKKSPAXKVEAAESNGKENGT 265
           P  Q     +D K++    +    +E  E  ++K+P  KV A E  GKE  T
Sbjct: 31  PYAQRVHLMLDAKKIPYHAIYINLSEKPEWYLEKNPLGKVPALEIPGKEGVT 82


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 506,698
Number of Sequences: 2352
Number of extensions: 8173
Number of successful extensions: 29
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63559560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)