Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_O08
(655 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92773-2|CAB07132.1| 160|Caenorhabditis elegans Hypothetical pr... 121 4e-28
Z69385-6|CAA93428.1| 104|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AL132865-8|CAB60606.2| 102|Caenorhabditis elegans Hypothetical ... 42 5e-04
AC084197-12|AAL00875.1| 98|Caenorhabditis elegans Lsm sm-like ... 39 0.004
Z69302-4|CAA93263.1| 125|Caenorhabditis elegans Hypothetical pr... 38 0.006
Z81071-3|CAB03013.1| 91|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z78012-3|CAB01413.1| 118|Caenorhabditis elegans Hypothetical pr... 36 0.025
U42436-7|AAO61428.2| 223|Caenorhabditis elegans Hypothetical pr... 31 0.54
AF038608-14|AAT92087.1| 314|Caenorhabditis elegans Serpentine r... 28 5.0
>Z92773-2|CAB07132.1| 160|Caenorhabditis elegans Hypothetical
protein W08E3.1 protein.
Length = 160
Score = 121 bits (292), Expect = 4e-28
Identities = 54/82 (65%), Positives = 66/82 (80%)
Frame = +1
Query: 103 MTIGKNNKMQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFXKIKSKNSKTAD 282
MTI KNNKM H+NYR+++ILQD RTFIG FKAFDKHMN++L +CEE +IK K K D
Sbjct: 1 MTISKNNKMMAHLNYRMKIILQDGRTFIGFFKAFDKHMNILLAECEEHRQIKPKAGKKTD 60
Query: 283 REEKRTLGFVLLRGENIVSLTI 348
EEKR LG VL+RGE+IVS+T+
Sbjct: 61 GEEKRILGLVLVRGEHIVSMTV 82
>Z69385-6|CAA93428.1| 104|Caenorhabditis elegans Hypothetical
protein ZK593.7 protein.
Length = 104
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/69 (30%), Positives = 35/69 (50%)
Frame = +1
Query: 127 MQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFXKIKSKNSKTADREEKRTLG 306
+ + ++ +RV Q R G + FD+ +N++L DC E+ + S D E R LG
Sbjct: 16 LTRFLDKEIRVKFQGGREASGVLRGFDQLLNMVLDDCREYLRDPQNPSVVGD--ETRQLG 73
Query: 307 FVLLRGENI 333
++ RG I
Sbjct: 74 LIVARGTAI 82
>AL132865-8|CAB60606.2| 102|Caenorhabditis elegans Hypothetical
protein Y62E10A.12 protein.
Length = 102
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/69 (26%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Frame = +1
Query: 139 INYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFXKIKSKNSKTAD---REEKRTLGF 309
++ RV V +++ R G +AFD+H+N++L + EE + + T + ++ KR +
Sbjct: 25 LDERVYVKMRNDRELRGRLRAFDQHLNMVLSEVEETITTREVDEDTFEEIYKQTKRVVPM 84
Query: 310 VLLRGENIV 336
+ +RG++++
Sbjct: 85 LFVRGDSVI 93
>AC084197-12|AAL00875.1| 98|Caenorhabditis elegans Lsm sm-like
protein protein 8 protein.
Length = 98
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/69 (28%), Positives = 35/69 (50%)
Frame = +1
Query: 127 MQQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFXKIKSKNSKTADREEKRTLG 306
+ ++N V V+ D R +G K FD+ +NL++ D E +++ T LG
Sbjct: 5 LDAYMNRMVNVVTGDGRVIVGLLKGFDQLINLVIEDAHERSYSETEGVLTT------PLG 58
Query: 307 FVLLRGENI 333
++RGEN+
Sbjct: 59 LYIIRGENV 67
>Z69302-4|CAA93263.1| 125|Caenorhabditis elegans Hypothetical
protein F40F8.9 protein.
Length = 125
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/67 (31%), Positives = 37/67 (55%)
Frame = +1
Query: 133 QHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFXKIKSKNSKTADREEKRTLGFV 312
+ ++ ++ V+L+D R IG ++ D+ NLIL D E ++ +T GF+
Sbjct: 16 EQLDKKLLVVLRDGRKLIGFLRSIDQFANLILEDVVERTFVEKYFCETGQ-------GFM 68
Query: 313 LLRGENI 333
L+RGEN+
Sbjct: 69 LIRGENV 75
>Z81071-3|CAB03013.1| 91|Caenorhabditis elegans Hypothetical
protein F28F8.3 protein.
Length = 91
Score = 37.1 bits (82), Expect = 0.011
Identities = 20/68 (29%), Positives = 35/68 (51%)
Frame = +1
Query: 139 INYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFXKIKSKNSKTADREEKRTLGFVLL 318
I ++ VI+++ + +GT FD ++N++L D E+ TAD + L +LL
Sbjct: 22 IGSKIWVIMKNDKEIVGTLTGFDDYVNMVLEDVVEY-------ENTADGKRMTKLDTILL 74
Query: 319 RGENIVSL 342
G +I L
Sbjct: 75 NGNHITML 82
>Z78012-3|CAB01413.1| 118|Caenorhabditis elegans Hypothetical
protein C52E4.3 protein.
Length = 118
Score = 35.9 bits (79), Expect = 0.025
Identities = 17/69 (24%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Frame = +1
Query: 142 NYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEEFXKIKSKNSKTADREEK----RTLGF 309
N++V + ++++ +G KAFD+H N++L + +E K K + + R +
Sbjct: 39 NHQVLINCRNNKKLLGRVKAFDRHCNMVLENVKEMWTEVPKTGKGKKKAKSVAKDRFISK 98
Query: 310 VLLRGENIV 336
+ LRG++++
Sbjct: 99 MFLRGDSVI 107
>U42436-7|AAO61428.2| 223|Caenorhabditis elegans Hypothetical
protein C49H3.4 protein.
Length = 223
Score = 31.5 bits (68), Expect = 0.54
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 130 QQHINYRVRVILQDSRTFIGTFKAFDKHMNLILGDCEE 243
Q+ I RVR ++ R F G FD+H NL++ D E
Sbjct: 120 QKRIEVRVRSAIRIDRIFEGIPTTFDEHFNLMMKDVTE 157
>AF038608-14|AAT92087.1| 314|Caenorhabditis elegans Serpentine
receptor, class z protein83 protein.
Length = 314
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = -2
Query: 147 IINMLLHLIVFADRHFIGVIRKILLDIWKASICFSDIHLTVAF 19
I++ LLH+I H I +IR +++ I+ A +CF+ HLT AF
Sbjct: 79 ILHTLLHVI-----HEIVIIRFLIVVIFYA-LCFTMYHLTKAF 115
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,014,344
Number of Sequences: 27780
Number of extensions: 181889
Number of successful extensions: 500
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 500
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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