Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_O06
(652 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 194 7e-50
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 192 3e-49
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 186 1e-47
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 180 7e-46
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 176 1e-44
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 159 2e-39
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 139 2e-33
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 78 7e-15
07_03_1647 + 28370226-28370369,28370452-28370611,28370704-283708... 29 2.4
06_03_1237 + 28602250-28604196 29 4.2
08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034 28 5.6
02_05_0552 - 29911280-29912541,29912633-29912762 28 7.4
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 194 bits (472), Expect = 7e-50
Identities = 100/184 (54%), Positives = 129/184 (70%), Gaps = 4/184 (2%)
Frame = +2
Query: 113 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYXNVVX 286
S + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAY NV+
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 279
Query: 287 ARRSSWRVISSIEQK--TXGSXRKQQMAKEYXVKVQKELREICYDVLGLLDKHLIPKASN 460
ARR+SWR+ISSIEQK + G+ + + KEY K++ EL +IC +L LLD HL+P ++
Sbjct: 280 ARRASWRIISSIEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTA 339
Query: 461 PESKVFYLKMKGDYYRYLAXVATGETXHSVVXDSQKAYQDAFEISKAKMQPTHPIXLGLA 640
PESKVFYLKMKGDYYRYLA TG ++ AY+ A +I+ A++ PTHPI LGLA
Sbjct: 340 PESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLA 399
Query: 641 LNFS 652
LNFS
Sbjct: 400 LNFS 403
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 192 bits (467), Expect = 3e-49
Identities = 98/184 (53%), Positives = 130/184 (70%), Gaps = 4/184 (2%)
Frame = +2
Query: 113 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYXNVVX 286
S+ + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAY NV+
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 61
Query: 287 ARRSSWRVISSIEQK--TXGSXRKQQMAKEYXVKVQKELREICYDVLGLLDKHLIPKASN 460
ARR+SWR+ISSIEQK + G+ + + K+Y K++ EL +IC +L LL+ HL+P ++
Sbjct: 62 ARRASWRIISSIEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTA 121
Query: 461 PESKVFYLKMKGDYYRYLAXVATGETXHSVVXDSQKAYQDAFEISKAKMQPTHPIXLGLA 640
PESKVFYLKMKGDYYRYLA TG ++ AY+ A +I+ A++ PTHPI LGLA
Sbjct: 122 PESKVFYLKMKGDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLA 181
Query: 641 LNFS 652
LNFS
Sbjct: 182 LNFS 185
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 186 bits (453), Expect = 1e-47
Identities = 96/179 (53%), Positives = 124/179 (69%), Gaps = 4/179 (2%)
Frame = +2
Query: 128 VDKEELVQRAKLAEQAERYDDMAAAMKEVTETG--VELSNEERNLLSVAYXNVVXARRSS 301
+ +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAY NV+ ARR+S
Sbjct: 1 MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRAS 60
Query: 302 WRVISSIEQKTXGSXRKQQMA--KEYXVKVQKELREICYDVLGLLDKHLIPKASNPESKV 475
WR++SSIEQK G ++ + KEY K++ EL +IC +L LLD HL+P ++ ESKV
Sbjct: 61 WRIVSSIEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKV 120
Query: 476 FYLKMKGDYYRYLAXVATGETXHSVVXDSQKAYQDAFEISKAKMQPTHPIXLGLALNFS 652
FYLKMKGDY+RYLA TG + AY+ A +I+ A + PTHPI LGLALNFS
Sbjct: 121 FYLKMKGDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFS 179
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 180 bits (439), Expect = 7e-46
Identities = 96/183 (52%), Positives = 123/183 (67%), Gaps = 4/183 (2%)
Frame = +2
Query: 116 STMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGV--ELSNEERNLLSVAYXNVVXA 289
S +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAY NV+ A
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGA 61
Query: 290 RRSSWRVISSIEQKTXGSXRKQQMA--KEYXVKVQKELREICYDVLGLLDKHLIPKASNP 463
RR+SWR+ISSIEQK + +A KEY +++ EL +IC +L LLD HL+P A+
Sbjct: 62 RRASWRIISSIEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSATAA 121
Query: 464 ESKVFYLKMKGDYYRYLAXVATGETXHSVVXDSQKAYQDAFEISKAKMQPTHPIXLGLAL 643
ESKVFYLKMKGDY+RYLA +G ++ AY+ A +I+ A + THPI LGLAL
Sbjct: 122 ESKVFYLKMKGDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLAL 181
Query: 644 NFS 652
NFS
Sbjct: 182 NFS 184
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 176 bits (429), Expect = 1e-44
Identities = 93/180 (51%), Positives = 120/180 (66%), Gaps = 7/180 (3%)
Frame = +2
Query: 134 KEELVQRAKLAEQAERYDDMAAAMKEVTET-----GVELSNEERNLLSVAYXNVVXARRS 298
+EE+V AKLAEQAERY++M M++V G EL+ EERNLLSVAY NV+ ARR+
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69
Query: 299 SWRVISSIEQKTXG--SXRKQQMAKEYXVKVQKELREICYDVLGLLDKHLIPKASNPESK 472
SWR++SSIEQK G + A+ Y +V+ EL IC +L LLD+ L+P A+ ++K
Sbjct: 70 SWRIVSSIEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAAAAVDAK 129
Query: 473 VFYLKMKGDYYRYLAXVATGETXHSVVXDSQKAYQDAFEISKAKMQPTHPIXLGLALNFS 652
VFYLKMKGDY+RYLA TG + AYQ A +I+ ++ PTHPI LGLALNFS
Sbjct: 130 VFYLKMKGDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAMKELSPTHPIRLGLALNFS 189
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 159 bits (386), Expect = 2e-39
Identities = 80/145 (55%), Positives = 97/145 (66%), Gaps = 2/145 (1%)
Frame = +2
Query: 224 GVELSNEERNLLSVAYXNVVXARRSSWRVISSIEQKTXGSXRKQQMA--KEYXVKVQKEL 397
G EL+ EERNLLSVAY NV+ ARR+SWR+ISSIEQK G A + Y K++ EL
Sbjct: 18 GEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEEGRGNDAHAATIRSYRGKIEAEL 77
Query: 398 REICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAXVATGETXHSVVXDSQKAYQ 577
IC +L LLD HL+P A ESKVFYLKMKGDY+RYLA +G+ + AY+
Sbjct: 78 ARICDGILALLDSHLVPSAGAAESKVFYLKMKGDYHRYLAEFKSGDERKQAAESTMNAYK 137
Query: 578 DAFEISKAKMQPTHPIXLGLALNFS 652
A +I+ A + PTHPI LGLALNFS
Sbjct: 138 AAQDIALADLAPTHPIRLGLALNFS 162
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 139 bits (337), Expect = 2e-33
Identities = 67/149 (44%), Positives = 94/149 (63%)
Frame = +2
Query: 131 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYXNVVXARRSSWRV 310
++E++V+ AKLAEQAERYDDM MK + V++S EER L SV + + ARR+SWR+
Sbjct: 3 EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSVGFKKTIGARRASWRI 62
Query: 311 ISSIEQKTXGSXRKQQMAKEYXVKVQKELREICYDVLGLLDKHLIPKASNPESKVFYLKM 490
+ S+EQK + Y KV+ ELR +C +VL ++ H +P A++ E+ VF+ KM
Sbjct: 63 LESLEQKVTAGDQPGVTINGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKM 122
Query: 491 KGDYYRYLAXVATGETXHSVVXDSQKAYQ 577
KGDYYRYLA +TG + S AYQ
Sbjct: 123 KGDYYRYLAEFSTGTEKKAATDQSLMAYQ 151
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 77.8 bits (183), Expect = 7e-15
Identities = 50/131 (38%), Positives = 68/131 (51%), Gaps = 2/131 (1%)
Frame = +2
Query: 191 MAAAMKEVTETGVELSNEERNLLSVAYXNVVXARRSSWRVISSIE--QKTXGSXRKQQMA 364
M AM V + L+ EERNLLSV Y N++ A+R++ R+I SIE ++T G +
Sbjct: 1 MVEAMNSVAKLDEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKESHVRQT 60
Query: 365 KEYXVKVQKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAXVATGETXH 544
EY KV+ E+ +IC DV+ ++DK KGDYYRYLA TG
Sbjct: 61 AEYRRKVEAEMDKICCDVINIIDK------------------KGDYYRYLAEFKTGTEKI 102
Query: 545 SVVXDSQKAYQ 577
V S AY+
Sbjct: 103 EVSELSLNAYE 113
>07_03_1647 +
28370226-28370369,28370452-28370611,28370704-28370831,
28372512-28372628,28372729-28372782,28372985-28373075,
28373517-28373688,28374452-28374573,28374726-28374817,
28375331-28375373,28375596-28375656,28376367-28376515,
28376659-28376729,28376805-28376975,28377056-28377124,
28377427-28377528,28377629-28377697,28378060-28378138,
28378238-28378337,28378438-28378513,28378715-28378894,
28379430-28379552,28379634-28379717,28380068-28380252,
28380339-28380477,28380585-28380644,28380926-28381030,
28381332-28381445
Length = 1019
Score = 29.5 bits (63), Expect = 2.4
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Frame = +2
Query: 239 NEERNLLSVAYXNVVXARRSSW-RVISSIEQKTXGSXRKQQMAKEYXVKVQKELREICYD 415
N + LLS AY N+ W + ISS+ Q+ S ++ Y + K L +
Sbjct: 291 NTKNALLSSAYVNLCCKESIKWTKHISSLCQRVLLSGPAG--SEIYQESLVKALTKHFGA 348
Query: 416 VLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAXV-ATG 532
L ++D L+ + +SK KGD RY+ V +TG
Sbjct: 349 KLLIIDPSLLASGQSSKSKESESYKKGDRVRYIGSVQSTG 388
>06_03_1237 + 28602250-28604196
Length = 648
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/72 (23%), Positives = 36/72 (50%)
Frame = +2
Query: 422 GLLDKHLIPKASNPESKVFYLKMKGDYYRYLAXVATGETXHSVVXDSQKAYQDAFEISKA 601
GL+D + + SKVFY + + Y Y + +A G H ++ +++ +++A
Sbjct: 314 GLVDMYAKCGLIDEASKVFYGMQEKNVYTYSSMIA-GLASHGRASEAIALFKEM--VNRA 370
Query: 602 KMQPTHPIXLGL 637
++P H +G+
Sbjct: 371 NVEPNHVTFIGV 382
>08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034
Length = 930
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Frame = +2
Query: 392 ELREICYDVLGLLDKHLIPKASNPES-----KVFYLKMKG 496
+LRE+ YD+ LD+ L+ A+ P S K+ K+KG
Sbjct: 71 DLRELSYDMEDSLDRFLVKSAAEPGSCKKLFKILLTKIKG 110
>02_05_0552 - 29911280-29912541,29912633-29912762
Length = 463
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 59 SNTFFPFRQGHQ*ISPLPSSTMSVDKEELVQRAKL-AEQAERYDDMAAAM 205
S T H SP+PSS +EEL++R +L AE +R M AA+
Sbjct: 50 SGTTVALNHRHGPCSPVPSSKKRPTEEELLKRDQLRAEHIQRKFAMNAAV 99
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,929,325
Number of Sequences: 37544
Number of extensions: 325900
Number of successful extensions: 846
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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