Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_O01
         (640 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF067608-4|AAK95863.2|  473|Caenorhabditis elegans Hypothetical ...   133   1e-31
Z68302-8|CAA92632.2|  342|Caenorhabditis elegans Hypothetical pr...    34   0.099

>AF067608-4|AAK95863.2|  473|Caenorhabditis elegans Hypothetical
           protein B0511.13 protein.
          Length = 473

 Score =  133 bits (321), Expect = 1e-31
 Identities = 65/135 (48%), Positives = 80/135 (59%)
 Frame = +3

Query: 222 YCEYIIYFIXIAQCNWPVTNDTHKSIQSLKALMISDTHLLGPXXGHWLDKMXREWQMHQA 401
           Y EY I+FI  + C WP       S  S+KA MISDTHLLG   GHWLDK+ REWQM+Q+
Sbjct: 20  YNEYFIFFIAFSSCQWPCKYG-RCSESSVKAFMISDTHLLGKINGHWLDKLKREWQMYQS 78

Query: 402 FQTIMMMLSPDVVFVLGDLFDEXEWTNNKXFQXYVERFYXLFMVPPHVKMYVVAXNHDIG 581
           F     + SPDV F LGDL DE +W     F+ Y ERF  LF    + K+  +A NHD+G
Sbjct: 79  FWISTWIHSPDVTFFLGDLMDEGKWAGRPVFEAYAERFKKLF--GDNEKVITLAGNHDLG 136

Query: 582 FHNYIRKGAIQRFYK 626
           FH  I    ++ F K
Sbjct: 137 FHYAIMPETLEMFKK 151


>Z68302-8|CAA92632.2|  342|Caenorhabditis elegans Hypothetical
           protein ZK792.7 protein.
          Length = 342

 Score = 33.9 bits (74), Expect = 0.099
 Identities = 17/51 (33%), Positives = 26/51 (50%)
 Frame = +3

Query: 429 PDVVFVLGDLFDEXEWTNNKXFQXYVERFYXLFMVPPHVKMYVVAXNHDIG 581
           P  V  LGDLFDE   +N+  +    ERF  ++ +        +A ++DIG
Sbjct: 91  PTTVMFLGDLFDEGIESNDDEWYETYERFIGIYPIDRGDNAIYIAGDNDIG 141


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,778,326
Number of Sequences: 27780
Number of extensions: 225797
Number of successful extensions: 448
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 446
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)