Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_N19
(643 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U06456-1|AAB19244.1| 196|Drosophila melanogaster transcription ... 153 1e-37
AY061435-1|AAL28983.1| 196|Drosophila melanogaster LD36256p pro... 153 1e-37
AE014297-1355|AAF54679.1| 196|Drosophila melanogaster CG17358-P... 153 1e-37
AE014297-1354|AAF54678.1| 196|Drosophila melanogaster CG17358-P... 153 1e-37
AE014297-1353|AAF54677.1| 196|Drosophila melanogaster CG17358-P... 153 1e-37
U06450-1|AAC46479.1| 160|Drosophila melanogaster TFIID 22 kDa s... 153 2e-37
AY752880-1|AAV33345.1| 138|Drosophila melanogaster TAF-like pro... 38 0.009
AE014134-766|AAF50987.1| 138|Drosophila melanogaster CG15632-PA... 38 0.012
AY070905-1|AAL48527.1| 1051|Drosophila melanogaster RE02096p pro... 30 2.3
AE014296-3007|AAF49271.2| 1051|Drosophila melanogaster CG13699-P... 30 2.3
AY102678-1|AAM27507.1| 281|Drosophila melanogaster LD16191p pro... 29 5.4
BT016112-1|AAV36997.1| 2062|Drosophila melanogaster LD13852p pro... 28 9.4
AJ007518-1|CAA07550.1| 2061|Drosophila melanogaster transcriptio... 28 9.4
AE013599-1527|AAM68625.1| 1751|Drosophila melanogaster CG8815-PD... 28 9.4
AE013599-1526|AAF58488.2| 1776|Drosophila melanogaster CG8815-PA... 28 9.4
AE013599-1525|AAM68624.1| 2062|Drosophila melanogaster CG8815-PC... 28 9.4
AE013599-1524|AAF58487.2| 2062|Drosophila melanogaster CG8815-PB... 28 9.4
>U06456-1|AAB19244.1| 196|Drosophila melanogaster transcription
initiation factorTFIID 28 kDa subunit protein.
Length = 196
Score = 153 bits (372), Expect = 1e-37
Identities = 80/176 (45%), Positives = 111/176 (63%), Gaps = 3/176 (1%)
Frame = +2
Query: 125 SNNSLAQAANM---PTIGTVGQGAIQYVNNPMQSPQLQNTSIQGSPSQHSPMGTQSQVXK 295
++NS + A+ + P + + Q + NN S Q + G + P+ S+
Sbjct: 21 NHNSTSSASGLLHDPPMASPSQHS-PMTNNSNSSSQ-NGGPVSGLGTGTGPISGGSKSSN 78
Query: 296 VGQGGAGDQSSQLLSRPRLQELXREVDPTVQLDEQVEEMLLQLAXDFIDTTLNSACALAK 475
AG +++ +L++PRL EL REVD T QLDE VEE+LLQ+ DF++ T+ S A AK
Sbjct: 79 HTSSAAGSENTPMLTKPRLTELVREVDTTTQLDEDVEELLLQIIDDFVEDTVKSTSAFAK 138
Query: 476 HRHAPNVXLXDVXLHLXRQWNMWIPXFGNDELRPYKRAAVTEAHRQRMALIRKSIK 643
HR + + + DV LH R++NMWIP FG DELRPYKRAAVTEAH+QR+ALIRK+IK
Sbjct: 139 HRKSNKIEVRDVQLHFERKYNMWIPGFGTDELRPYKRAAVTEAHKQRLALIRKTIK 194
>AY061435-1|AAL28983.1| 196|Drosophila melanogaster LD36256p
protein.
Length = 196
Score = 153 bits (372), Expect = 1e-37
Identities = 80/176 (45%), Positives = 111/176 (63%), Gaps = 3/176 (1%)
Frame = +2
Query: 125 SNNSLAQAANM---PTIGTVGQGAIQYVNNPMQSPQLQNTSIQGSPSQHSPMGTQSQVXK 295
++NS + A+ + P + + Q + NN S Q + G + P+ S+
Sbjct: 21 NHNSTSSASGLLHDPPMASPSQHS-PMTNNSNSSSQ-NGGPVSGLGTGTGPISGGSKSSN 78
Query: 296 VGQGGAGDQSSQLLSRPRLQELXREVDPTVQLDEQVEEMLLQLAXDFIDTTLNSACALAK 475
AG +++ +L++PRL EL REVD T QLDE VEE+LLQ+ DF++ T+ S A AK
Sbjct: 79 HTSSAAGSENTPMLTKPRLTELVREVDTTTQLDEDVEELLLQIIDDFVEDTVKSTSAFAK 138
Query: 476 HRHAPNVXLXDVXLHLXRQWNMWIPXFGNDELRPYKRAAVTEAHRQRMALIRKSIK 643
HR + + + DV LH R++NMWIP FG DELRPYKRAAVTEAH+QR+ALIRK+IK
Sbjct: 139 HRKSNKIEVRDVQLHFERKYNMWIPGFGTDELRPYKRAAVTEAHKQRLALIRKTIK 194
>AE014297-1355|AAF54679.1| 196|Drosophila melanogaster CG17358-PC,
isoform C protein.
Length = 196
Score = 153 bits (372), Expect = 1e-37
Identities = 80/176 (45%), Positives = 111/176 (63%), Gaps = 3/176 (1%)
Frame = +2
Query: 125 SNNSLAQAANM---PTIGTVGQGAIQYVNNPMQSPQLQNTSIQGSPSQHSPMGTQSQVXK 295
++NS + A+ + P + + Q + NN S Q + G + P+ S+
Sbjct: 21 NHNSTSSASGLLHDPPMASPSQHS-PMTNNSNSSSQ-NGGPVSGLGTGTGPISGGSKSSN 78
Query: 296 VGQGGAGDQSSQLLSRPRLQELXREVDPTVQLDEQVEEMLLQLAXDFIDTTLNSACALAK 475
AG +++ +L++PRL EL REVD T QLDE VEE+LLQ+ DF++ T+ S A AK
Sbjct: 79 HTSSAAGSENTPMLTKPRLTELVREVDTTTQLDEDVEELLLQIIDDFVEDTVKSTSAFAK 138
Query: 476 HRHAPNVXLXDVXLHLXRQWNMWIPXFGNDELRPYKRAAVTEAHRQRMALIRKSIK 643
HR + + + DV LH R++NMWIP FG DELRPYKRAAVTEAH+QR+ALIRK+IK
Sbjct: 139 HRKSNKIEVRDVQLHFERKYNMWIPGFGTDELRPYKRAAVTEAHKQRLALIRKTIK 194
>AE014297-1354|AAF54678.1| 196|Drosophila melanogaster CG17358-PB,
isoform B protein.
Length = 196
Score = 153 bits (372), Expect = 1e-37
Identities = 80/176 (45%), Positives = 111/176 (63%), Gaps = 3/176 (1%)
Frame = +2
Query: 125 SNNSLAQAANM---PTIGTVGQGAIQYVNNPMQSPQLQNTSIQGSPSQHSPMGTQSQVXK 295
++NS + A+ + P + + Q + NN S Q + G + P+ S+
Sbjct: 21 NHNSTSSASGLLHDPPMASPSQHS-PMTNNSNSSSQ-NGGPVSGLGTGTGPISGGSKSSN 78
Query: 296 VGQGGAGDQSSQLLSRPRLQELXREVDPTVQLDEQVEEMLLQLAXDFIDTTLNSACALAK 475
AG +++ +L++PRL EL REVD T QLDE VEE+LLQ+ DF++ T+ S A AK
Sbjct: 79 HTSSAAGSENTPMLTKPRLTELVREVDTTTQLDEDVEELLLQIIDDFVEDTVKSTSAFAK 138
Query: 476 HRHAPNVXLXDVXLHLXRQWNMWIPXFGNDELRPYKRAAVTEAHRQRMALIRKSIK 643
HR + + + DV LH R++NMWIP FG DELRPYKRAAVTEAH+QR+ALIRK+IK
Sbjct: 139 HRKSNKIEVRDVQLHFERKYNMWIPGFGTDELRPYKRAAVTEAHKQRLALIRKTIK 194
>AE014297-1353|AAF54677.1| 196|Drosophila melanogaster CG17358-PA,
isoform A protein.
Length = 196
Score = 153 bits (372), Expect = 1e-37
Identities = 80/176 (45%), Positives = 111/176 (63%), Gaps = 3/176 (1%)
Frame = +2
Query: 125 SNNSLAQAANM---PTIGTVGQGAIQYVNNPMQSPQLQNTSIQGSPSQHSPMGTQSQVXK 295
++NS + A+ + P + + Q + NN S Q + G + P+ S+
Sbjct: 21 NHNSTSSASGLLHDPPMASPSQHS-PMTNNSNSSSQ-NGGPVSGLGTGTGPISGGSKSSN 78
Query: 296 VGQGGAGDQSSQLLSRPRLQELXREVDPTVQLDEQVEEMLLQLAXDFIDTTLNSACALAK 475
AG +++ +L++PRL EL REVD T QLDE VEE+LLQ+ DF++ T+ S A AK
Sbjct: 79 HTSSAAGSENTPMLTKPRLTELVREVDTTTQLDEDVEELLLQIIDDFVEDTVKSTSAFAK 138
Query: 476 HRHAPNVXLXDVXLHLXRQWNMWIPXFGNDELRPYKRAAVTEAHRQRMALIRKSIK 643
HR + + + DV LH R++NMWIP FG DELRPYKRAAVTEAH+QR+ALIRK+IK
Sbjct: 139 HRKSNKIEVRDVQLHFERKYNMWIPGFGTDELRPYKRAAVTEAHKQRLALIRKTIK 194
>U06450-1|AAC46479.1| 160|Drosophila melanogaster TFIID 22 kDa
subunit protein.
Length = 160
Score = 153 bits (371), Expect = 2e-37
Identities = 75/148 (50%), Positives = 98/148 (66%)
Frame = +2
Query: 200 NNPMQSPQLQNTSIQGSPSQHSPMGTQSQVXKVGQGGAGDQSSQLLSRPRLQELXREVDP 379
NN S Q + G + P+ S+ AG +++ +L++PRL EL REVD
Sbjct: 12 NNSNSSSQ-NGGPVSGLGTGTGPISGGSKSSNHTSSAAGSENTPMLTKPRLTELVREVDT 70
Query: 380 TVQLDEQVEEMLLQLAXDFIDTTLNSACALAKHRHAPNVXLXDVXLHLXRQWNMWIPXFG 559
T QLDE VEE+LLQ+ DF++ T+ S A AKHR + + + DV LH R++NMWIP FG
Sbjct: 71 TTQLDEDVEELLLQIIDDFVEDTVKSTSAFAKHRKSNKIEVRDVQLHFERKYNMWIPGFG 130
Query: 560 NDELRPYKRAAVTEAHRQRMALIRKSIK 643
DELRPYKRAAVTEAH+QR+ALIRK+IK
Sbjct: 131 TDELRPYKRAAVTEAHKQRLALIRKTIK 158
>AY752880-1|AAV33345.1| 138|Drosophila melanogaster TAF-like
protein protein.
Length = 138
Score = 38.3 bits (85), Expect = 0.009
Identities = 20/76 (26%), Positives = 42/76 (55%)
Frame = +2
Query: 323 SSQLLSRPRLQELXREVDPTVQLDEQVEEMLLQLAXDFIDTTLNSACALAKHRHAPNVXL 502
S ++S+ + + +++D LD+Q +M+ ++A F++ LAK+R + +V +
Sbjct: 62 SYDIISKTNMLQFVQKIDANSSLDDQGCDMMARIADAFVNDVSMRMVKLAKYRKS-DVSV 120
Query: 503 XDVXLHLXRQWNMWIP 550
D+ L R++NM P
Sbjct: 121 LDLKFILKREFNMEFP 136
>AE014134-766|AAF50987.1| 138|Drosophila melanogaster CG15632-PA
protein.
Length = 138
Score = 37.9 bits (84), Expect = 0.012
Identities = 20/76 (26%), Positives = 42/76 (55%)
Frame = +2
Query: 323 SSQLLSRPRLQELXREVDPTVQLDEQVEEMLLQLAXDFIDTTLNSACALAKHRHAPNVXL 502
S ++S+ + + +++D LD+Q +M+ ++A F++ LAK+R + +V +
Sbjct: 62 SYDIISKTNMLQFVQKIDANSSLDDQGCDMMARIADAFVNDISMRIVKLAKYRKS-DVSV 120
Query: 503 XDVXLHLXRQWNMWIP 550
D+ L R++NM P
Sbjct: 121 LDLKFILKREFNMEFP 136
>AY070905-1|AAL48527.1| 1051|Drosophila melanogaster RE02096p
protein.
Length = 1051
Score = 30.3 bits (65), Expect = 2.3
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Frame = +2
Query: 167 GTVGQGAIQYVNNPMQSPQLQNTSIQG--SPS----QHSPMGTQSQVXKVGQGGAGDQSS 328
G VG G + + +PQ N + G SPS SP+G+ QGGAG QS
Sbjct: 396 GGVGGGLATLAS--LYAPQFTNLLLGGGGSPSASTQSSSPLGSLLGAFAGAQGGAGQQSG 453
Query: 329 QL-LSRPRLQELXREVDPTVQLDE 397
L SRP +L R ++ + D+
Sbjct: 454 GLGGSRPPNTQLIRALENIARNDD 477
>AE014296-3007|AAF49271.2| 1051|Drosophila melanogaster CG13699-PA
protein.
Length = 1051
Score = 30.3 bits (65), Expect = 2.3
Identities = 28/84 (33%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Frame = +2
Query: 167 GTVGQGAIQYVNNPMQSPQLQNTSIQG--SPS----QHSPMGTQSQVXKVGQGGAGDQSS 328
G VG G + + +PQ N + G SPS SP+G+ QGGAG QS
Sbjct: 396 GGVGGGLATLAS--LYAPQFTNLLLGGGGSPSASTQSSSPLGSLLGAFAGAQGGAGQQSG 453
Query: 329 QL-LSRPRLQELXREVDPTVQLDE 397
L SRP +L R ++ + D+
Sbjct: 454 GLGGSRPPNTQLIRALENIARNDD 477
>AY102678-1|AAM27507.1| 281|Drosophila melanogaster LD16191p
protein.
Length = 281
Score = 29.1 bits (62), Expect = 5.4
Identities = 18/78 (23%), Positives = 30/78 (38%)
Frame = +2
Query: 179 QGAIQYVNNPMQSPQLQNTSIQGSPSQHSPMGTQSQVXKVGQGGAGDQSSQLLSRPRLQE 358
Q +QY P+Q Q Q+ I P+ Q + G Q Q+L+ +Q+
Sbjct: 87 QAPVQYQQVPVQQQQQQHQPIHQQPTMQQQQQPQQGHHQQAGGHHHGQPQQVLNTGNIQQ 146
Query: 359 LXREVDPTVQLDEQVEEM 412
+ +QL +M
Sbjct: 147 ERAHIQEHMQLPIDTSKM 164
>BT016112-1|AAV36997.1| 2062|Drosophila melanogaster LD13852p
protein.
Length = 2062
Score = 28.3 bits (60), Expect = 9.4
Identities = 20/69 (28%), Positives = 28/69 (40%)
Frame = +2
Query: 140 AQAANMPTIGTVGQGAIQYVNNPMQSPQLQNTSIQGSPSQHSPMGTQSQVXKVGQGGAGD 319
A AN I G GA NNP + + ++S G+ Q + GTQ+ VG
Sbjct: 170 ADGANTVQIHVTGGGA---ANNPASAQTVSSSSQTGTIRQRTISGTQTVATAVGNLATIS 226
Query: 320 QSSQLLSRP 346
Q + P
Sbjct: 227 QQQPVQQSP 235
>AJ007518-1|CAA07550.1| 2061|Drosophila melanogaster transcription
factor protein.
Length = 2061
Score = 28.3 bits (60), Expect = 9.4
Identities = 20/69 (28%), Positives = 28/69 (40%)
Frame = +2
Query: 140 AQAANMPTIGTVGQGAIQYVNNPMQSPQLQNTSIQGSPSQHSPMGTQSQVXKVGQGGAGD 319
A AN I G GA NNP + + ++S G+ Q + GTQ+ VG
Sbjct: 170 ADGANTVQIHVTGGGA---ANNPASAQTVSSSSQTGTIRQRTISGTQTVATAVGNLATIS 226
Query: 320 QSSQLLSRP 346
Q + P
Sbjct: 227 QQQPVQQSP 235
>AE013599-1527|AAM68625.1| 1751|Drosophila melanogaster CG8815-PD,
isoform D protein.
Length = 1751
Score = 28.3 bits (60), Expect = 9.4
Identities = 20/69 (28%), Positives = 28/69 (40%)
Frame = +2
Query: 140 AQAANMPTIGTVGQGAIQYVNNPMQSPQLQNTSIQGSPSQHSPMGTQSQVXKVGQGGAGD 319
A AN I G GA NNP + + ++S G+ Q + GTQ+ VG
Sbjct: 170 ADGANTVQIHVTGGGA---ANNPASAQTVSSSSQTGTIRQRTISGTQTVATAVGNLATIS 226
Query: 320 QSSQLLSRP 346
Q + P
Sbjct: 227 QQQPVQQSP 235
>AE013599-1526|AAF58488.2| 1776|Drosophila melanogaster CG8815-PA,
isoform A protein.
Length = 1776
Score = 28.3 bits (60), Expect = 9.4
Identities = 20/69 (28%), Positives = 28/69 (40%)
Frame = +2
Query: 140 AQAANMPTIGTVGQGAIQYVNNPMQSPQLQNTSIQGSPSQHSPMGTQSQVXKVGQGGAGD 319
A AN I G GA NNP + + ++S G+ Q + GTQ+ VG
Sbjct: 170 ADGANTVQIHVTGGGA---ANNPASAQTVSSSSQTGTIRQRTISGTQTVATAVGNLATIS 226
Query: 320 QSSQLLSRP 346
Q + P
Sbjct: 227 QQQPVQQSP 235
>AE013599-1525|AAM68624.1| 2062|Drosophila melanogaster CG8815-PC,
isoform C protein.
Length = 2062
Score = 28.3 bits (60), Expect = 9.4
Identities = 20/69 (28%), Positives = 28/69 (40%)
Frame = +2
Query: 140 AQAANMPTIGTVGQGAIQYVNNPMQSPQLQNTSIQGSPSQHSPMGTQSQVXKVGQGGAGD 319
A AN I G GA NNP + + ++S G+ Q + GTQ+ VG
Sbjct: 170 ADGANTVQIHVTGGGA---ANNPASAQTVSSSSQTGTIRQRTISGTQTVATAVGNLATIS 226
Query: 320 QSSQLLSRP 346
Q + P
Sbjct: 227 QQQPVQQSP 235
>AE013599-1524|AAF58487.2| 2062|Drosophila melanogaster CG8815-PB,
isoform B protein.
Length = 2062
Score = 28.3 bits (60), Expect = 9.4
Identities = 20/69 (28%), Positives = 28/69 (40%)
Frame = +2
Query: 140 AQAANMPTIGTVGQGAIQYVNNPMQSPQLQNTSIQGSPSQHSPMGTQSQVXKVGQGGAGD 319
A AN I G GA NNP + + ++S G+ Q + GTQ+ VG
Sbjct: 170 ADGANTVQIHVTGGGA---ANNPASAQTVSSSSQTGTIRQRTISGTQTVATAVGNLATIS 226
Query: 320 QSSQLLSRP 346
Q + P
Sbjct: 227 QQQPVQQSP 235
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,435,502
Number of Sequences: 53049
Number of extensions: 423368
Number of successful extensions: 1421
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1351
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1416
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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