Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P04_F_N15
         (652 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0441 + 3130906-3131424,3131847-3132269                           30   1.4  
12_01_0389 + 3067808-3069121                                           29   4.2  
03_06_0497 - 34332310-34334415                                         28   5.6  
07_01_0220 - 1631395-1631496,1632063-1634036                           27   9.8  
01_03_0148 - 13153782-13154870,13155823-13156672,13156698-13157008     27   9.8  
01_03_0146 + 13120727-13121037,13121063-13121912,13122854-131235...    27   9.8  

>06_01_0441 + 3130906-3131424,3131847-3132269
          Length = 313

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = -2

Query: 483 LFVHKLHXHSIHLGQHMWCALICTTELQIL 394
           L  ++LH H IHL  ++ CAL C+  + +L
Sbjct: 280 LMFYRLHAHGIHLVLNLSCALQCSRSVVLL 309


>12_01_0389 + 3067808-3069121
          Length = 437

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 46  VTSETSLRYYKKIRNRWIVSIWSTTPHKQPPLDLTEL 156
           VTS T + Y ++  +RW+ +  S+ P    PL L++L
Sbjct: 22  VTSPTGISYDRRAIHRWLAAGHSSCPVTGHPLSLSDL 58


>03_06_0497 - 34332310-34334415
          Length = 701

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 16/51 (31%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +3

Query: 342 PAVAVLSMFVLMVIILILRFGAQWCKL-RHTTYADQDEWNEXEAYEQKVSY 491
           P + +L++ +L V+IL+L   A    + R   YA+++E  E E    ++SY
Sbjct: 305 PPLIILTILLLSVVILLLAAAAVAALVVRSRRYAEEEEEWEIEYGPHRISY 355


>07_01_0220 - 1631395-1631496,1632063-1634036
          Length = 691

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +3

Query: 36  ETVSY*RNFTSLL*ENKKSLDCFHLVYNPS*TAS 137
           E  S  RNF  L    KK  D + + YNPS T S
Sbjct: 627 ELASTHRNFNELASMRKKGFDPYIMSYNPSSTGS 660


>01_03_0148 - 13153782-13154870,13155823-13156672,13156698-13157008
          Length = 749

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = +1

Query: 82  IRNRWIVSIWSTTPHKQPPLDL 147
           IR  WI+ +W++   ++PP+++
Sbjct: 95  IRKMWIILLWASPTRRRPPVNM 116


>01_03_0146 +
           13120727-13121037,13121063-13121912,13122854-13123561,
           13123596-13123943
          Length = 738

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 7/22 (31%), Positives = 16/22 (72%)
 Frame = +1

Query: 82  IRNRWIVSIWSTTPHKQPPLDL 147
           IR  WI+ +W++   ++PP+++
Sbjct: 95  IRKMWIILLWASPTRRRPPVNM 116


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,607,000
Number of Sequences: 37544
Number of extensions: 235348
Number of successful extensions: 567
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 567
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)