Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P04_F_N06
(651 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58757-6|AAC47920.1| 656|Caenorhabditis elegans Hypothetical pr... 144 4e-35
Z81037-8|CAI79129.1| 217|Caenorhabditis elegans Hypothetical pr... 81 7e-16
U70849-12|AAF99920.2| 236|Caenorhabditis elegans Hypothetical p... 51 8e-07
AF125448-8|AAD12813.2| 334|Caenorhabditis elegans Hypothetical ... 39 0.004
AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical ... 34 0.10
Z77667-1|CAB01236.2| 391|Caenorhabditis elegans Hypothetical pr... 31 0.54
U41028-4|AAA82357.1| 455|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF067609-11|AAC17532.2| 252|Caenorhabditis elegans Hypothetical... 29 3.8
Z78198-3|CAB01569.1| 1010|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z92973-3|CAB07491.1| 244|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z81563-1|CAB04563.1| 257|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z75540-1|CAA99847.2| 1227|Caenorhabditis elegans Hypothetical pr... 27 8.7
>U58757-6|AAC47920.1| 656|Caenorhabditis elegans Hypothetical
protein C01B10.8 protein.
Length = 656
Score = 144 bits (350), Expect = 4e-35
Identities = 75/180 (41%), Positives = 102/180 (56%), Gaps = 2/180 (1%)
Frame = +3
Query: 117 PRSHKEFSEKDYWNKFFXKRGNKAFEWYGEYLELCGQLNKYIKTKDSILITGCGNSSLSA 296
P + F++ YW FF KR FEWYG+Y L ++KY+K KD+ L GCGNS L+
Sbjct: 4 PNEPQSFTDPAYWKNFFAKR-KSPFEWYGDYNSLSNVIDKYLKPKDTFLQLGCGNSELAT 62
Query: 297 DLYDVGYVNITNVDVSEVVIKQMKNVNKARTNMKFMCMDATRMSFEXEAFNVVLXKGTLD 476
LYD G+ I ++DV VI NK R M F DA +S EA +V+ KGTLD
Sbjct: 63 QLYDNGFHCIHSIDVEPSVIATQIRKNKERLGMTFETGDAANLSMADEAHTIVIDKGTLD 122
Query: 477 ALM-PDATEXTNAIIXKYFSEIKRVLKLGGRFVCISLLQSHILAKLMEGFC-XKSWMFRV 650
AL+ P A+E A++ K F E+ RVL GGR++ ++L Q HI + F K ++ RV
Sbjct: 123 ALLPPSASESDEALVTKMFEEVHRVLASGGRYIIVTLAQPHITEFWINHFYPLKQYILRV 182
>Z81037-8|CAI79129.1| 217|Caenorhabditis elegans Hypothetical
protein C17E4.11 protein.
Length = 217
Score = 81.0 bits (191), Expect = 7e-16
Identities = 56/166 (33%), Positives = 91/166 (54%), Gaps = 8/166 (4%)
Frame = +3
Query: 123 SHKEFSEKDYWNKFFXKRGNKAFEWYGEYLELCGQLNKYIKTKDS-ILITGCGNSSLSAD 299
S+ +++ DYW++ F N FEW L + + +KDS I GCG+S +S
Sbjct: 3 SNSQYARMDYWDERFQTEKN--FEWLSG-LNAFQHIITPLFSKDSRIAHIGCGSSQVSMQ 59
Query: 300 LYDVGYVNITNVDVSEVVIKQMKNVNKARTNMKFMCMDATRM-SFEXEAFNVVLXKGTLD 476
L+++GY NITN+D S+V+I +N NM+++ D T + + E +F+VV K T++
Sbjct: 60 LWELGYRNITNIDYSQVLI---ENGRLEYPNMEWISDDITTLINCESSSFDVVFEKATIE 116
Query: 477 ALM---PDATEXTNAI---IXKYFSEIKRVLKLGGRFVCISLLQSH 596
A++ A E +++ + FS I RVLK G F+ +S Q H
Sbjct: 117 AILVTEKSAWEPSDSALHNLENIFSSICRVLKPNGIFISVSFTQPH 162
>U70849-12|AAF99920.2| 236|Caenorhabditis elegans Hypothetical
protein F29B9.1 protein.
Length = 236
Score = 50.8 bits (116), Expect = 8e-07
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 23/173 (13%)
Frame = +3
Query: 132 EFSEKDYWN-------KFFXKRGNKAFEWYGEYLELCGQLNKYI---KT-KDS-ILITGC 275
+ KD+W+ K F + G++ W+G E ++ KY+ KT KD+ IL GC
Sbjct: 15 QLGTKDFWDQRYELELKNFKQHGDEGEVWFGTSSET--RIVKYLIDSKTGKDAKILDLGC 72
Query: 276 GNSSLSADLYDVGYVNITNVDVSEVVIKQMKNVNKAR---------TNMKFMCMDATR-- 422
GN S+ L G+ ++ VD + + +KA +++F +D T
Sbjct: 73 GNGSVLRKLRSKGFQSLKGVDYCQKAVDLSAAASKAEREEEEDEELVDIEFEQLDITTPP 132
Query: 423 MSFEXEAFNVVLXKGTLDALMPDATEXTNAIIXKYFSEIKRVLKLGGRFVCIS 581
F F+V+L KGT DA+ ++ A + Y + L GGRFV S
Sbjct: 133 ADFFSSKFDVILDKGTWDAM--SLSDEREARLKAYLGFLDNGLSAGGRFVIFS 183
>AF125448-8|AAD12813.2| 334|Caenorhabditis elegans Hypothetical
protein H14E04.1 protein.
Length = 334
Score = 38.7 bits (86), Expect = 0.004
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 3/112 (2%)
Frame = +3
Query: 270 GCGNSSLSADLYDVGYVNITNVDVS--EVVIKQMKNVNKARTNM-KFMCMDATRMSFEXE 440
GCG + D+ D G +T V ++ E I K N ++ K + D +M FE
Sbjct: 103 GCGIGGVMLDIADFG-AKLTGVTIAPNEAEIGNEKFANMGISDRCKIVAADCQKMPFEDS 161
Query: 441 AFNVVLXKGTLDALMPDATEXTNAIIXKYFSEIKRVLKLGGRFVCISLLQSH 596
F+V +L + P+ + K EI+RVLK GG+F+ L++++
Sbjct: 162 TFDVAYAIYSLKYI-PN--------LDKVMKEIQRVLKPGGKFIVYDLIKTN 204
>AF067607-8|AAF98614.1| 144|Caenorhabditis elegans Hypothetical
protein C18H7.9 protein.
Length = 144
Score = 33.9 bits (74), Expect = 0.10
Identities = 21/76 (27%), Positives = 34/76 (44%)
Frame = +3
Query: 225 QLNKYIKTKDSILITGCGNSSLSADLYDVGYVNITNVDVSEVVIKQMKNVNKARTNMKFM 404
+L KY +L GCGN S G + D S+ +I+ KN++K+ F
Sbjct: 30 KLLKYNLKDKKVLDIGCGNGLNSTTFLQWGARKVVGFDNSQEMIENCKNLHKSSEQSSFH 89
Query: 405 CMDATRMSFEXEAFNV 452
++ T + E F+V
Sbjct: 90 HLNVTDFQLD-EKFHV 104
>Z77667-1|CAB01236.2| 391|Caenorhabditis elegans Hypothetical
protein M04B2.2 protein.
Length = 391
Score = 31.5 bits (68), Expect = 0.54
Identities = 17/71 (23%), Positives = 34/71 (47%)
Frame = +3
Query: 369 NVNKARTNMKFMCMDATRMSFEXEAFNVVLXKGTLDALMPDATEXTNAIIXKYFSEIKRV 548
N + +R+N F+ DAT + + + ++ + T+ + + +E KRV
Sbjct: 279 NSSSSRSNCDFLTWDATNLPLRDNSIDALVTDLPFGKKIGSTTD-NRLLYPRLLAEWKRV 337
Query: 549 LKLGGRFVCIS 581
L+ GGR V ++
Sbjct: 338 LRKGGRLVLMT 348
>U41028-4|AAA82357.1| 455|Caenorhabditis elegans Hypothetical
protein C25G6.5 protein.
Length = 455
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -3
Query: 397 FILVLALFTFFICLITTSETSTFVIFTYPTSYRSALKL 284
FIL LAL FF+C++T T V++ + R+ K+
Sbjct: 77 FILNLALSDFFVCIVTAPTTLYTVLYMFWPFSRTLCKI 114
>Z83240-3|CAB05813.2| 483|Caenorhabditis elegans Hypothetical
protein T23H4.1 protein.
Length = 483
Score = 28.7 bits (61), Expect = 3.8
Identities = 12/41 (29%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Frame = -2
Query: 425 HSRSIHAHKLHIGSGFVY---VFHLFNNNFRDIHICYIYIS 312
H S+ H+ IG Y VF +FN + + ++ Y+Y++
Sbjct: 186 HLSSVFKHRFRIGEKHPYHHKVFRIFNVRYYESYLTYLYLA 226
>AF067609-11|AAC17532.2| 252|Caenorhabditis elegans Hypothetical
protein C23H5.1 protein.
Length = 252
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/75 (25%), Positives = 31/75 (41%), Gaps = 3/75 (4%)
Frame = +3
Query: 237 YIKTKDSILITGCGNSSLSADLYDVGYVNITNVDVSEVVI---KQMKNVNKARTNMKFMC 407
+I +L GCGN S D G + VD SE +I K + + + F+
Sbjct: 33 HILVGKEVLDVGCGNGHYSFDFLRWGAHKVFGVDNSEEMIQICKSSPDFENFNSKIDFLL 92
Query: 408 MDATRMSFEXEAFNV 452
+ T + +F+V
Sbjct: 93 GEVTNFHVDGASFDV 107
>Z78198-3|CAB01569.1| 1010|Caenorhabditis elegans Hypothetical
protein F55C5.4 protein.
Length = 1010
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 78 SFYKHQTFIMNLLPRSHKEFSEKDYWNKFFXKR 176
+ +K+ I+ L + HK SE DYW++ KR
Sbjct: 825 NIFKNHREIVESLRQFHKRVSETDYWDEDSAKR 857
>Z92973-3|CAB07491.1| 244|Caenorhabditis elegans Hypothetical
protein Y6G8.3 protein.
Length = 244
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 495 TEXTNAIIXKYFSEIKRVLKLGGRFVCIS 581
T N +I K +SE+KR L G+F+C S
Sbjct: 2 TSILNPVIRKEYSELKRP-DLRGKFICAS 29
>Z81563-1|CAB04563.1| 257|Caenorhabditis elegans Hypothetical
protein K04H8.1 protein.
Length = 257
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -2
Query: 500 FCSIRH*GVKSTFX*HNIKRFXFKRHSRSIHAHKLHIG 387
FC +H GV S+F K F R + +++H G
Sbjct: 115 FCYTQHNGVLSSFDSEEEKNFVLNETMRFVEKYQIHAG 152
>Z75540-1|CAA99847.2| 1227|Caenorhabditis elegans Hypothetical protein
F37D6.1 protein.
Length = 1227
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +3
Query: 183 KAFEWYGEYLELCGQLNKYIKTKDS 257
K+FEW E L C + N+ +K +DS
Sbjct: 1069 KSFEWTREKLLACSKKNESLKERDS 1093
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,758,101
Number of Sequences: 27780
Number of extensions: 240731
Number of successful extensions: 809
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 757
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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